Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:11142:11143
Extra
PDB:
ATOM 1 O3' A A1141 42.324 -8.215 25.172 1.00 43.18 O
ATOM 2 P C A1142 41.467 -7.412 26.255 1.00 40.81 P
ATOM 3 OP1 C A1142 40.055 -7.797 26.061 1.00 40.91 O
ATOM 4 OP2 C A1142 41.832 -5.992 26.130 1.00 40.83 O
ATOM 5 O5' C A1142 41.982 -8.005 27.647 1.00 40.46 O
ATOM 6 C5' C A1142 41.500 -9.266 28.093 1.00 40.38 C
ATOM 7 C4' C A1142 42.165 -9.728 29.355 1.00 40.07 C
ATOM 8 O4' C A1142 43.598 -9.769 29.178 1.00 40.08 O
ATOM 9 C3' C A1142 41.957 -8.860 30.579 1.00 39.79 C
ATOM 10 O3' C A1142 40.731 -9.133 31.206 1.00 39.70 O
ATOM 11 C2' C A1142 43.123 -9.254 31.444 1.00 39.58 C
ATOM 12 O2' C A1142 42.840 -10.486 32.068 1.00 39.47 O
ATOM 13 C1' C A1142 44.233 -9.474 30.401 1.00 39.79 C
ATOM 14 N1 C A1142 45.096 -8.251 30.234 1.00 39.79 N
ATOM 15 C2 C A1142 46.096 -7.987 31.167 1.00 39.57 C
ATOM 16 O2 C A1142 46.229 -8.818 32.068 1.00 39.39 O
ATOM 17 N3 C A1142 46.877 -6.880 31.073 1.00 39.58 N
ATOM 18 C4 C A1142 46.660 -6.046 30.069 1.00 39.80 C
ATOM 19 N4 C A1142 47.386 -4.953 29.952 1.00 39.83 N
ATOM 20 C5 C A1142 45.684 -6.280 29.092 1.00 40.03 C
ATOM 21 C6 C A1142 44.928 -7.370 29.215 1.00 40.02 C
ATOM 22 P C A1143 39.983 -8.036 32.099 1.00 41.08 P
ATOM 23 OP1 C A1143 40.924 -7.596 33.187 1.00 40.82 O
ATOM 24 OP2 C A1143 38.699 -8.624 32.490 1.00 41.05 O
ATOM 25 O5' C A1143 39.748 -6.855 31.075 1.00 41.30 O
TER
ATOM 1 O3' C B1142 40.731 -9.133 31.206 1.00 39.70 O
ATOM 2 P C B1143 39.983 -8.036 32.099 1.00 41.08 P
ATOM 3 OP1 C B1143 40.924 -7.596 33.187 1.00 40.82 O
ATOM 4 OP2 C B1143 38.699 -8.624 32.490 1.00 41.05 O
ATOM 5 O5' C B1143 39.748 -6.855 31.075 1.00 41.30 O
ATOM 6 C5' C B1143 39.110 -5.690 31.497 1.00 41.24 C
ATOM 7 C4' C B1143 39.577 -4.535 30.717 1.00 41.41 C
ATOM 8 O4' C B1143 40.683 -3.928 31.405 1.00 41.23 O
ATOM 9 C3' C B1143 40.060 -4.867 29.321 1.00 41.70 C
ATOM 10 O3' C B1143 39.725 -3.796 28.460 1.00 41.93 O
ATOM 11 C2' C B1143 41.559 -4.910 29.464 1.00 41.61 C
ATOM 12 O2' C B1143 42.239 -4.590 28.275 1.00 41.87 O
ATOM 13 C1' C B1143 41.790 -3.848 30.546 1.00 41.38 C
ATOM 14 N1 C B1143 42.982 -4.061 31.371 1.00 41.16 N
ATOM 15 C2 C B1143 43.947 -3.094 31.331 1.00 41.17 C
ATOM 16 O2 C B1143 43.749 -2.118 30.584 1.00 41.36 O
ATOM 17 N3 C B1143 45.049 -3.240 32.117 1.00 40.98 N
ATOM 18 C4 C B1143 45.154 -4.301 32.902 1.00 40.80 C
ATOM 19 N4 C B1143 46.240 -4.396 33.631 1.00 40.64 N
ATOM 20 C5 C B1143 44.158 -5.303 32.937 1.00 40.79 C
ATOM 21 C6 C B1143 43.091 -5.132 32.175 1.00 40.97 C
ATOM 22 P A B1144 38.225 -3.624 27.946 1.00 42.53 P
ATOM 23 OP1 A B1144 37.557 -4.977 28.017 1.00 42.52 O
ATOM 24 OP2 A B1144 38.321 -2.912 26.656 1.00 42.85 O
ATOM 25 O5' A B1144 37.579 -2.687 29.041 1.00 42.33 O
TER
ATOM 2 P C A1142 41.467 -7.412 26.255 1.00 40.81 P
ATOM 3 OP1 C A1142 40.055 -7.797 26.061 1.00 40.91 O
ATOM 4 OP2 C A1142 41.832 -5.992 26.130 1.00 40.83 O
ATOM 5 O5' C A1142 41.982 -8.005 27.647 1.00 40.46 O
ATOM 6 C5' C A1142 41.500 -9.266 28.093 1.00 40.38 C
ATOM 7 C4' C A1142 42.165 -9.728 29.355 1.00 40.07 C
ATOM 8 O4' C A1142 43.598 -9.769 29.178 1.00 40.08 O
ATOM 9 C3' C A1142 41.957 -8.860 30.579 1.00 39.79 C
ATOM 10 O3' C A1142 40.731 -9.133 31.206 1.00 39.70 O
ATOM 11 C2' C A1142 43.123 -9.254 31.444 1.00 39.58 C
ATOM 12 O2' C A1142 42.840 -10.486 32.068 1.00 39.47 O
ATOM 13 C1' C A1142 44.233 -9.474 30.401 1.00 39.79 C
ATOM 14 N1 C A1142 45.096 -8.251 30.234 1.00 39.79 N
ATOM 15 C2 C A1142 46.096 -7.987 31.167 1.00 39.57 C
ATOM 16 O2 C A1142 46.229 -8.818 32.068 1.00 39.39 O
ATOM 17 N3 C A1142 46.877 -6.880 31.073 1.00 39.58 N
ATOM 18 C4 C A1142 46.660 -6.046 30.069 1.00 39.80 C
ATOM 19 N4 C A1142 47.386 -4.953 29.952 1.00 39.83 N
ATOM 20 C5 C A1142 45.684 -6.280 29.092 1.00 40.03 C
ATOM 21 C6 C A1142 44.928 -7.370 29.215 1.00 40.02 C
ATOM 22 P C A1143 39.983 -8.036 32.099 1.00 41.08 P
ATOM 23 OP1 C A1143 40.924 -7.596 33.187 1.00 40.82 O
ATOM 24 OP2 C A1143 38.699 -8.624 32.490 1.00 41.05 O
ATOM 25 O5' C A1143 39.748 -6.855 31.075 1.00 41.30 O
TER
ATOM 1 O3' C B1142 40.731 -9.133 31.206 1.00 39.70 O
ATOM 2 P C B1143 39.983 -8.036 32.099 1.00 41.08 P
ATOM 3 OP1 C B1143 40.924 -7.596 33.187 1.00 40.82 O
ATOM 4 OP2 C B1143 38.699 -8.624 32.490 1.00 41.05 O
ATOM 5 O5' C B1143 39.748 -6.855 31.075 1.00 41.30 O
ATOM 6 C5' C B1143 39.110 -5.690 31.497 1.00 41.24 C
ATOM 7 C4' C B1143 39.577 -4.535 30.717 1.00 41.41 C
ATOM 8 O4' C B1143 40.683 -3.928 31.405 1.00 41.23 O
ATOM 9 C3' C B1143 40.060 -4.867 29.321 1.00 41.70 C
ATOM 10 O3' C B1143 39.725 -3.796 28.460 1.00 41.93 O
ATOM 11 C2' C B1143 41.559 -4.910 29.464 1.00 41.61 C
ATOM 12 O2' C B1143 42.239 -4.590 28.275 1.00 41.87 O
ATOM 13 C1' C B1143 41.790 -3.848 30.546 1.00 41.38 C
ATOM 14 N1 C B1143 42.982 -4.061 31.371 1.00 41.16 N
ATOM 15 C2 C B1143 43.947 -3.094 31.331 1.00 41.17 C
ATOM 16 O2 C B1143 43.749 -2.118 30.584 1.00 41.36 O
ATOM 17 N3 C B1143 45.049 -3.240 32.117 1.00 40.98 N
ATOM 18 C4 C B1143 45.154 -4.301 32.902 1.00 40.80 C
ATOM 19 N4 C B1143 46.240 -4.396 33.631 1.00 40.64 N
ATOM 20 C5 C B1143 44.158 -5.303 32.937 1.00 40.79 C
ATOM 21 C6 C B1143 43.091 -5.132 32.175 1.00 40.97 C
ATOM 22 P A B1144 38.225 -3.624 27.946 1.00 42.53 P
ATOM 23 OP1 A B1144 37.557 -4.977 28.017 1.00 42.52 O
ATOM 24 OP2 A B1144 38.321 -2.912 26.656 1.00 42.85 O
ATOM 25 O5' A B1144 37.579 -2.687 29.041 1.00 42.33 O
TER
Atoms:
C2: (46.096,-7.987,31.167)
OP1: (40.055,-7.797,26.061)
OP2: (41.832,-5.992,26.130)
C4: (46.660,-6.046,30.069)
O5': (41.982,-8.005,27.647)
C3': (41.957,-8.860,30.579)
C1': (44.233,-9.474,30.401)
O4': (43.598,-9.769,29.178)
C5': (41.500,-9.266,28.093)
P: (41.467,-7.412,26.255)
O2: (46.229,-8.818,32.068)
C4': (42.165,-9.728,29.355)
C2': (43.123,-9.254,31.444)
O2': (42.840,-10.486,32.068)
N1: (45.096,-8.251,30.234)
N3: (46.877,-6.880,31.073)
N4: (47.386,-4.953,29.952)
C6: (44.928,-7.370,29.215)
C5: (45.684,-6.280,29.092)
O3': (40.731,-9.133,31.206)
OP1: (40.055,-7.797,26.061)
OP2: (41.832,-5.992,26.130)
C4: (46.660,-6.046,30.069)
O5': (41.982,-8.005,27.647)
C3': (41.957,-8.860,30.579)
C1': (44.233,-9.474,30.401)
O4': (43.598,-9.769,29.178)
C5': (41.500,-9.266,28.093)
P: (41.467,-7.412,26.255)
O2: (46.229,-8.818,32.068)
C4': (42.165,-9.728,29.355)
C2': (43.123,-9.254,31.444)
O2': (42.840,-10.486,32.068)
N1: (45.096,-8.251,30.234)
N3: (46.877,-6.880,31.073)
N4: (47.386,-4.953,29.952)
C6: (44.928,-7.370,29.215)
C5: (45.684,-6.280,29.092)
O3': (40.731,-9.133,31.206)
C2: (43.947,-3.094,31.331)
OP1: (40.924,-7.596,33.187)
OP2: (38.699,-8.624,32.490)
C4: (45.154,-4.301,32.902)
O5': (39.748,-6.855,31.075)
C3': (40.060,-4.867,29.321)
C1': (41.790,-3.848,30.546)
O4': (40.683,-3.928,31.405)
C5': (39.110,-5.690,31.497)
P: (39.983,-8.036,32.099)
O2: (43.749,-2.118,30.584)
C4': (39.577,-4.535,30.717)
C2': (41.559,-4.910,29.464)
O2': (42.239,-4.590,28.275)
N1: (42.982,-4.061,31.371)
N3: (45.049,-3.240,32.117)
N4: (46.240,-4.396,33.631)
C6: (43.091,-5.132,32.175)
C5: (44.158,-5.303,32.937)
O3': (39.725,-3.796,28.460)
OP1: (40.924,-7.596,33.187)
OP2: (38.699,-8.624,32.490)
C4: (45.154,-4.301,32.902)
O5': (39.748,-6.855,31.075)
C3': (40.060,-4.867,29.321)
C1': (41.790,-3.848,30.546)
O4': (40.683,-3.928,31.405)
C5': (39.110,-5.690,31.497)
P: (39.983,-8.036,32.099)
O2: (43.749,-2.118,30.584)
C4': (39.577,-4.535,30.717)
C2': (41.559,-4.910,29.464)
O2': (42.239,-4.590,28.275)
N1: (42.982,-4.061,31.371)
N3: (45.049,-3.240,32.117)
N4: (46.240,-4.396,33.631)
C6: (43.091,-5.132,32.175)
C5: (44.158,-5.303,32.937)
O3': (39.725,-3.796,28.460)
Image (generated by PyMOL):