Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:12145:12146
Extra
PDB:
ATOM 1 O3' C A2144 11.178 34.625 58.389 1.00 43.36 O
ATOM 2 P C A2145 12.120 35.655 57.589 1.00 40.42 P
ATOM 3 OP1 C A2145 13.009 34.833 56.785 1.00 40.09 O
ATOM 4 OP2 C A2145 12.702 36.621 58.554 1.00 40.56 O
ATOM 5 O5' C A2145 11.102 36.395 56.652 1.00 40.86 O
ATOM 6 C5' C A2145 10.276 35.681 55.786 1.00 40.85 C
ATOM 7 C4' C A2145 9.239 36.585 55.224 1.00 41.33 C
ATOM 8 O4' C A2145 8.353 37.033 56.273 1.00 41.55 O
ATOM 9 C3' C A2145 9.739 37.870 54.598 1.00 41.67 C
ATOM 10 O3' C A2145 10.250 37.633 53.302 1.00 41.62 O
ATOM 11 C2' C A2145 8.466 38.712 54.609 1.00 42.15 C
ATOM 12 O2' C A2145 7.603 38.311 53.548 1.00 42.28 O
ATOM 13 C1' C A2145 7.809 38.267 55.923 1.00 42.04 C
ATOM 14 N1 C A2145 8.031 39.192 57.043 1.00 42.21 N
ATOM 15 C2 C A2145 7.328 40.407 57.124 1.00 42.71 C
ATOM 16 O2 C A2145 6.548 40.749 56.224 1.00 43.03 O
ATOM 17 N3 C A2145 7.538 41.178 58.198 1.00 42.86 N
ATOM 18 C4 C A2145 8.380 40.768 59.156 1.00 42.53 C
ATOM 19 N4 C A2145 8.545 41.574 60.202 1.00 42.71 N
ATOM 20 C5 C A2145 9.098 39.535 59.100 1.00 42.01 C
ATOM 21 C6 C A2145 8.879 38.771 58.036 1.00 41.87 C
ATOM 22 P C A2146 11.303 38.612 52.602 1.00 46.37 P
ATOM 23 OP1 C A2146 10.571 39.808 52.080 1.00 46.91 O
ATOM 24 OP2 C A2146 12.067 37.784 51.651 1.00 46.08 O
ATOM 25 O5' C A2146 12.244 39.041 53.777 1.00 46.25 O
TER
ATOM 1 O3' C B2145 10.250 37.633 53.302 1.00 41.62 O
ATOM 2 P C B2146 11.303 38.612 52.602 1.00 46.37 P
ATOM 3 OP1 C B2146 10.571 39.808 52.080 1.00 46.91 O
ATOM 4 OP2 C B2146 12.067 37.784 51.651 1.00 46.08 O
ATOM 5 O5' C B2146 12.244 39.041 53.777 1.00 46.25 O
ATOM 6 C5' C B2146 13.631 39.158 53.547 1.00 46.08 C
ATOM 7 C4' C B2146 14.300 39.705 54.734 1.00 46.05 C
ATOM 8 O4' C B2146 13.712 40.979 55.017 1.00 46.53 O
ATOM 9 C3' C B2146 14.129 38.873 55.980 1.00 45.74 C
ATOM 10 O3' C B2146 15.319 38.961 56.759 1.00 45.54 O
ATOM 11 C2' C B2146 12.957 39.561 56.694 1.00 46.09 C
ATOM 12 O2' C B2146 12.929 39.408 58.096 1.00 45.97 O
ATOM 13 C1' C B2146 13.155 41.003 56.296 1.00 46.54 C
ATOM 14 N1 C B2146 11.911 41.781 56.201 1.00 46.99 N
ATOM 15 C2 C B2146 11.604 42.637 57.257 1.00 47.26 C
ATOM 16 O2 C B2146 12.437 42.600 58.221 1.00 47.06 O
ATOM 17 N3 C B2146 10.452 43.413 57.177 1.00 47.72 N
ATOM 18 C4 C B2146 9.673 43.351 56.085 1.00 47.90 C
ATOM 19 N4 C B2146 8.592 44.111 55.994 1.00 48.36 N
ATOM 20 C5 C B2146 9.998 42.493 55.009 1.00 47.63 C
ATOM 21 C6 C B2146 11.106 41.748 55.088 1.00 47.19 C
ATOM 22 P U B2147 16.665 38.218 56.285 1.00 43.66 P
ATOM 23 OP1 U B2147 16.389 37.481 55.053 1.00 43.56 O
ATOM 24 OP2 U B2147 17.168 37.484 57.461 1.00 43.30 O
ATOM 25 O5' U B2147 17.608 39.438 55.948 1.00 43.92 O
TER
ATOM 2 P C A2145 12.120 35.655 57.589 1.00 40.42 P
ATOM 3 OP1 C A2145 13.009 34.833 56.785 1.00 40.09 O
ATOM 4 OP2 C A2145 12.702 36.621 58.554 1.00 40.56 O
ATOM 5 O5' C A2145 11.102 36.395 56.652 1.00 40.86 O
ATOM 6 C5' C A2145 10.276 35.681 55.786 1.00 40.85 C
ATOM 7 C4' C A2145 9.239 36.585 55.224 1.00 41.33 C
ATOM 8 O4' C A2145 8.353 37.033 56.273 1.00 41.55 O
ATOM 9 C3' C A2145 9.739 37.870 54.598 1.00 41.67 C
ATOM 10 O3' C A2145 10.250 37.633 53.302 1.00 41.62 O
ATOM 11 C2' C A2145 8.466 38.712 54.609 1.00 42.15 C
ATOM 12 O2' C A2145 7.603 38.311 53.548 1.00 42.28 O
ATOM 13 C1' C A2145 7.809 38.267 55.923 1.00 42.04 C
ATOM 14 N1 C A2145 8.031 39.192 57.043 1.00 42.21 N
ATOM 15 C2 C A2145 7.328 40.407 57.124 1.00 42.71 C
ATOM 16 O2 C A2145 6.548 40.749 56.224 1.00 43.03 O
ATOM 17 N3 C A2145 7.538 41.178 58.198 1.00 42.86 N
ATOM 18 C4 C A2145 8.380 40.768 59.156 1.00 42.53 C
ATOM 19 N4 C A2145 8.545 41.574 60.202 1.00 42.71 N
ATOM 20 C5 C A2145 9.098 39.535 59.100 1.00 42.01 C
ATOM 21 C6 C A2145 8.879 38.771 58.036 1.00 41.87 C
ATOM 22 P C A2146 11.303 38.612 52.602 1.00 46.37 P
ATOM 23 OP1 C A2146 10.571 39.808 52.080 1.00 46.91 O
ATOM 24 OP2 C A2146 12.067 37.784 51.651 1.00 46.08 O
ATOM 25 O5' C A2146 12.244 39.041 53.777 1.00 46.25 O
TER
ATOM 1 O3' C B2145 10.250 37.633 53.302 1.00 41.62 O
ATOM 2 P C B2146 11.303 38.612 52.602 1.00 46.37 P
ATOM 3 OP1 C B2146 10.571 39.808 52.080 1.00 46.91 O
ATOM 4 OP2 C B2146 12.067 37.784 51.651 1.00 46.08 O
ATOM 5 O5' C B2146 12.244 39.041 53.777 1.00 46.25 O
ATOM 6 C5' C B2146 13.631 39.158 53.547 1.00 46.08 C
ATOM 7 C4' C B2146 14.300 39.705 54.734 1.00 46.05 C
ATOM 8 O4' C B2146 13.712 40.979 55.017 1.00 46.53 O
ATOM 9 C3' C B2146 14.129 38.873 55.980 1.00 45.74 C
ATOM 10 O3' C B2146 15.319 38.961 56.759 1.00 45.54 O
ATOM 11 C2' C B2146 12.957 39.561 56.694 1.00 46.09 C
ATOM 12 O2' C B2146 12.929 39.408 58.096 1.00 45.97 O
ATOM 13 C1' C B2146 13.155 41.003 56.296 1.00 46.54 C
ATOM 14 N1 C B2146 11.911 41.781 56.201 1.00 46.99 N
ATOM 15 C2 C B2146 11.604 42.637 57.257 1.00 47.26 C
ATOM 16 O2 C B2146 12.437 42.600 58.221 1.00 47.06 O
ATOM 17 N3 C B2146 10.452 43.413 57.177 1.00 47.72 N
ATOM 18 C4 C B2146 9.673 43.351 56.085 1.00 47.90 C
ATOM 19 N4 C B2146 8.592 44.111 55.994 1.00 48.36 N
ATOM 20 C5 C B2146 9.998 42.493 55.009 1.00 47.63 C
ATOM 21 C6 C B2146 11.106 41.748 55.088 1.00 47.19 C
ATOM 22 P U B2147 16.665 38.218 56.285 1.00 43.66 P
ATOM 23 OP1 U B2147 16.389 37.481 55.053 1.00 43.56 O
ATOM 24 OP2 U B2147 17.168 37.484 57.461 1.00 43.30 O
ATOM 25 O5' U B2147 17.608 39.438 55.948 1.00 43.92 O
TER
Atoms:
C2: (7.328,40.407,57.124)
OP1: (13.009,34.833,56.785)
OP2: (12.702,36.621,58.554)
C4: (8.380,40.768,59.156)
O5': (11.102,36.395,56.652)
C3': (9.739,37.870,54.598)
C1': (7.809,38.267,55.923)
O4': (8.353,37.033,56.273)
C5': (10.276,35.681,55.786)
P: (12.120,35.655,57.589)
O2: (6.548,40.749,56.224)
C4': (9.239,36.585,55.224)
C2': (8.466,38.712,54.609)
O2': (7.603,38.311,53.548)
N1: (8.031,39.192,57.043)
N3: (7.538,41.178,58.198)
N4: (8.545,41.574,60.202)
C6: (8.879,38.771,58.036)
C5: (9.098,39.535,59.100)
O3': (10.250,37.633,53.302)
OP1: (13.009,34.833,56.785)
OP2: (12.702,36.621,58.554)
C4: (8.380,40.768,59.156)
O5': (11.102,36.395,56.652)
C3': (9.739,37.870,54.598)
C1': (7.809,38.267,55.923)
O4': (8.353,37.033,56.273)
C5': (10.276,35.681,55.786)
P: (12.120,35.655,57.589)
O2: (6.548,40.749,56.224)
C4': (9.239,36.585,55.224)
C2': (8.466,38.712,54.609)
O2': (7.603,38.311,53.548)
N1: (8.031,39.192,57.043)
N3: (7.538,41.178,58.198)
N4: (8.545,41.574,60.202)
C6: (8.879,38.771,58.036)
C5: (9.098,39.535,59.100)
O3': (10.250,37.633,53.302)
C2: (11.604,42.637,57.257)
OP1: (10.571,39.808,52.080)
OP2: (12.067,37.784,51.651)
C4: (9.673,43.351,56.085)
O5': (12.244,39.041,53.777)
C3': (14.129,38.873,55.980)
C1': (13.155,41.003,56.296)
O4': (13.712,40.979,55.017)
C5': (13.631,39.158,53.547)
P: (11.303,38.612,52.602)
O2: (12.437,42.600,58.221)
C4': (14.300,39.705,54.734)
C2': (12.957,39.561,56.694)
O2': (12.929,39.408,58.096)
N1: (11.911,41.781,56.201)
N3: (10.452,43.413,57.177)
N4: (8.592,44.111,55.994)
C6: (11.106,41.748,55.088)
C5: (9.998,42.493,55.009)
O3': (15.319,38.961,56.759)
OP1: (10.571,39.808,52.080)
OP2: (12.067,37.784,51.651)
C4: (9.673,43.351,56.085)
O5': (12.244,39.041,53.777)
C3': (14.129,38.873,55.980)
C1': (13.155,41.003,56.296)
O4': (13.712,40.979,55.017)
C5': (13.631,39.158,53.547)
P: (11.303,38.612,52.602)
O2: (12.437,42.600,58.221)
C4': (14.300,39.705,54.734)
C2': (12.957,39.561,56.694)
O2': (12.929,39.408,58.096)
N1: (11.911,41.781,56.201)
N3: (10.452,43.413,57.177)
N4: (8.592,44.111,55.994)
C6: (11.106,41.748,55.088)
C5: (9.998,42.493,55.009)
O3': (15.319,38.961,56.759)
Image (generated by PyMOL):