Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3IVN:A36:A34
Extra
PDB:
ATOM 1 O3' U A 35 9.873 -17.974 30.441 1.00 21.49 O
ATOM 2 P C A 36 9.402 -19.504 30.585 1.00 22.33 P
ATOM 3 OP1 C A 36 10.031 -20.006 31.832 1.00 22.10 O
ATOM 4 OP2 C A 36 9.707 -20.162 29.288 1.00 22.01 O
ATOM 5 O5' C A 36 7.825 -19.401 30.783 1.00 21.15 O
ATOM 6 C5' C A 36 7.015 -18.666 29.867 1.00 20.19 C
ATOM 7 C4' C A 36 5.647 -19.287 29.756 1.00 19.99 C
ATOM 8 O4' C A 36 4.941 -19.233 31.022 1.00 19.71 O
ATOM 9 C3' C A 36 4.715 -18.617 28.767 1.00 19.55 C
ATOM 10 O3' C A 36 4.975 -19.073 27.457 1.00 19.68 O
ATOM 11 C2' C A 36 3.345 -19.037 29.277 1.00 19.55 C
ATOM 12 O2' C A 36 3.098 -20.376 28.882 1.00 21.10 O
ATOM 13 C1' C A 36 3.560 -19.039 30.791 1.00 19.51 C
ATOM 14 N1 C A 36 3.108 -17.818 31.501 1.00 19.27 N
ATOM 15 C2 C A 36 1.796 -17.361 31.337 1.00 18.91 C
ATOM 16 O2 C A 36 1.025 -17.971 30.582 1.00 19.06 O
ATOM 17 N3 C A 36 1.396 -16.253 32.003 1.00 19.07 N
ATOM 18 C4 C A 36 2.243 -15.610 32.807 1.00 19.08 C
ATOM 19 N4 C A 36 1.800 -14.521 33.439 1.00 18.59 N
ATOM 20 C5 C A 36 3.582 -16.056 32.998 1.00 19.04 C
ATOM 21 C6 C A 36 3.964 -17.154 32.335 1.00 19.34 C
ATOM 22 P U A 37 5.317 -18.025 26.295 1.00 21.01 P
ATOM 23 OP1 U A 37 5.471 -18.810 25.045 1.00 21.53 O
ATOM 24 OP2 U A 37 6.450 -17.203 26.786 1.00 20.51 O
ATOM 25 O5' U A 37 3.987 -17.152 26.247 1.00 20.77 O
TER
ATOM 1 O3' U B 33 8.469 -12.075 38.368 1.00 20.39 O
ATOM 2 P G B 34 6.936 -12.174 38.841 1.00 21.16 P
ATOM 3 OP1 G B 34 6.470 -11.217 39.878 1.00 20.18 O
ATOM 4 OP2 G B 34 7.020 -13.595 39.245 1.00 20.96 O
ATOM 5 O5' G B 34 6.078 -12.105 37.512 1.00 19.54 O
ATOM 6 C5' G B 34 5.312 -13.276 37.255 1.00 19.20 C
ATOM 7 C4' G B 34 5.012 -13.484 35.796 1.00 19.23 C
ATOM 8 O4' G B 34 3.856 -12.725 35.347 1.00 18.61 O
ATOM 9 C3' G B 34 6.174 -13.119 34.886 1.00 19.57 C
ATOM 10 O3' G B 34 6.289 -14.079 33.862 1.00 19.85 O
ATOM 11 C2' G B 34 5.729 -11.762 34.327 1.00 18.76 C
ATOM 12 O2' G B 34 6.279 -11.452 33.074 1.00 18.68 O
ATOM 13 C1' G B 34 4.223 -11.929 34.235 1.00 18.44 C
ATOM 14 N9 G B 34 3.471 -10.681 34.363 1.00 18.59 N
ATOM 15 C8 G B 34 3.702 -9.672 35.265 1.00 18.16 C
ATOM 16 N7 G B 34 2.862 -8.684 35.145 1.00 18.23 N
ATOM 17 C5 G B 34 2.025 -9.058 34.105 1.00 18.07 C
ATOM 18 C6 G B 34 0.918 -8.386 33.525 1.00 18.26 C
ATOM 19 O6 G B 34 0.439 -7.286 33.821 1.00 18.35 O
ATOM 20 N1 G B 34 0.354 -9.126 32.496 1.00 18.11 N
ATOM 21 C2 G B 34 0.795 -10.353 32.075 1.00 18.09 C
ATOM 22 N2 G B 34 0.114 -10.907 31.061 1.00 18.29 N
ATOM 23 N3 G B 34 1.823 -10.989 32.608 1.00 18.47 N
ATOM 24 C4 G B 34 2.388 -10.290 33.611 1.00 18.23 C
ATOM 25 P U B 35 7.329 -15.264 34.160 1.00 19.96 P
ATOM 26 OP1 U B 35 6.626 -16.515 33.787 1.00 20.39 O
ATOM 27 OP2 U B 35 7.817 -15.090 35.553 1.00 18.82 O
ATOM 28 O5' U B 35 8.486 -14.941 33.124 1.00 20.09 O
TER
ATOM 2 P C A 36 9.402 -19.504 30.585 1.00 22.33 P
ATOM 3 OP1 C A 36 10.031 -20.006 31.832 1.00 22.10 O
ATOM 4 OP2 C A 36 9.707 -20.162 29.288 1.00 22.01 O
ATOM 5 O5' C A 36 7.825 -19.401 30.783 1.00 21.15 O
ATOM 6 C5' C A 36 7.015 -18.666 29.867 1.00 20.19 C
ATOM 7 C4' C A 36 5.647 -19.287 29.756 1.00 19.99 C
ATOM 8 O4' C A 36 4.941 -19.233 31.022 1.00 19.71 O
ATOM 9 C3' C A 36 4.715 -18.617 28.767 1.00 19.55 C
ATOM 10 O3' C A 36 4.975 -19.073 27.457 1.00 19.68 O
ATOM 11 C2' C A 36 3.345 -19.037 29.277 1.00 19.55 C
ATOM 12 O2' C A 36 3.098 -20.376 28.882 1.00 21.10 O
ATOM 13 C1' C A 36 3.560 -19.039 30.791 1.00 19.51 C
ATOM 14 N1 C A 36 3.108 -17.818 31.501 1.00 19.27 N
ATOM 15 C2 C A 36 1.796 -17.361 31.337 1.00 18.91 C
ATOM 16 O2 C A 36 1.025 -17.971 30.582 1.00 19.06 O
ATOM 17 N3 C A 36 1.396 -16.253 32.003 1.00 19.07 N
ATOM 18 C4 C A 36 2.243 -15.610 32.807 1.00 19.08 C
ATOM 19 N4 C A 36 1.800 -14.521 33.439 1.00 18.59 N
ATOM 20 C5 C A 36 3.582 -16.056 32.998 1.00 19.04 C
ATOM 21 C6 C A 36 3.964 -17.154 32.335 1.00 19.34 C
ATOM 22 P U A 37 5.317 -18.025 26.295 1.00 21.01 P
ATOM 23 OP1 U A 37 5.471 -18.810 25.045 1.00 21.53 O
ATOM 24 OP2 U A 37 6.450 -17.203 26.786 1.00 20.51 O
ATOM 25 O5' U A 37 3.987 -17.152 26.247 1.00 20.77 O
TER
ATOM 1 O3' U B 33 8.469 -12.075 38.368 1.00 20.39 O
ATOM 2 P G B 34 6.936 -12.174 38.841 1.00 21.16 P
ATOM 3 OP1 G B 34 6.470 -11.217 39.878 1.00 20.18 O
ATOM 4 OP2 G B 34 7.020 -13.595 39.245 1.00 20.96 O
ATOM 5 O5' G B 34 6.078 -12.105 37.512 1.00 19.54 O
ATOM 6 C5' G B 34 5.312 -13.276 37.255 1.00 19.20 C
ATOM 7 C4' G B 34 5.012 -13.484 35.796 1.00 19.23 C
ATOM 8 O4' G B 34 3.856 -12.725 35.347 1.00 18.61 O
ATOM 9 C3' G B 34 6.174 -13.119 34.886 1.00 19.57 C
ATOM 10 O3' G B 34 6.289 -14.079 33.862 1.00 19.85 O
ATOM 11 C2' G B 34 5.729 -11.762 34.327 1.00 18.76 C
ATOM 12 O2' G B 34 6.279 -11.452 33.074 1.00 18.68 O
ATOM 13 C1' G B 34 4.223 -11.929 34.235 1.00 18.44 C
ATOM 14 N9 G B 34 3.471 -10.681 34.363 1.00 18.59 N
ATOM 15 C8 G B 34 3.702 -9.672 35.265 1.00 18.16 C
ATOM 16 N7 G B 34 2.862 -8.684 35.145 1.00 18.23 N
ATOM 17 C5 G B 34 2.025 -9.058 34.105 1.00 18.07 C
ATOM 18 C6 G B 34 0.918 -8.386 33.525 1.00 18.26 C
ATOM 19 O6 G B 34 0.439 -7.286 33.821 1.00 18.35 O
ATOM 20 N1 G B 34 0.354 -9.126 32.496 1.00 18.11 N
ATOM 21 C2 G B 34 0.795 -10.353 32.075 1.00 18.09 C
ATOM 22 N2 G B 34 0.114 -10.907 31.061 1.00 18.29 N
ATOM 23 N3 G B 34 1.823 -10.989 32.608 1.00 18.47 N
ATOM 24 C4 G B 34 2.388 -10.290 33.611 1.00 18.23 C
ATOM 25 P U B 35 7.329 -15.264 34.160 1.00 19.96 P
ATOM 26 OP1 U B 35 6.626 -16.515 33.787 1.00 20.39 O
ATOM 27 OP2 U B 35 7.817 -15.090 35.553 1.00 18.82 O
ATOM 28 O5' U B 35 8.486 -14.941 33.124 1.00 20.09 O
TER
Atoms:
C2: (1.796,-17.361,31.337)
OP1: (10.031,-20.006,31.832)
OP2: (9.707,-20.162,29.288)
C4: (2.243,-15.610,32.807)
O5': (7.825,-19.401,30.783)
C3': (4.715,-18.617,28.767)
C1': (3.560,-19.039,30.791)
O4': (4.941,-19.233,31.022)
C5': (7.015,-18.666,29.867)
P: (9.402,-19.504,30.585)
O2: (1.025,-17.971,30.582)
C4': (5.647,-19.287,29.756)
C2': (3.345,-19.037,29.277)
O2': (3.098,-20.376,28.882)
N1: (3.108,-17.818,31.501)
N3: (1.396,-16.253,32.003)
N4: (1.800,-14.521,33.439)
C6: (3.964,-17.154,32.335)
C5: (3.582,-16.056,32.998)
O3': (4.975,-19.073,27.457)
OP1: (10.031,-20.006,31.832)
OP2: (9.707,-20.162,29.288)
C4: (2.243,-15.610,32.807)
O5': (7.825,-19.401,30.783)
C3': (4.715,-18.617,28.767)
C1': (3.560,-19.039,30.791)
O4': (4.941,-19.233,31.022)
C5': (7.015,-18.666,29.867)
P: (9.402,-19.504,30.585)
O2: (1.025,-17.971,30.582)
C4': (5.647,-19.287,29.756)
C2': (3.345,-19.037,29.277)
O2': (3.098,-20.376,28.882)
N1: (3.108,-17.818,31.501)
N3: (1.396,-16.253,32.003)
N4: (1.800,-14.521,33.439)
C6: (3.964,-17.154,32.335)
C5: (3.582,-16.056,32.998)
O3': (4.975,-19.073,27.457)
OP1: (6.470,-11.217,39.878)
OP2: (7.020,-13.595,39.245)
C3': (6.174,-13.119,34.886)
C1': (4.223,-11.929,34.235)
C5': (5.312,-13.276,37.255)
O6: (0.439,-7.286,33.821)
O4': (3.856,-12.725,35.347)
C8: (3.702,-9.672,35.265)
C2: (0.795,-10.353,32.075)
C6: (0.918,-8.386,33.525)
C5: (2.025,-9.058,34.105)
C4: (2.388,-10.290,33.611)
P: (6.936,-12.174,38.841)
C4': (5.012,-13.484,35.796)
C2': (5.729,-11.762,34.327)
O2': (6.279,-11.452,33.074)
N1: (0.354,-9.126,32.496)
N2: (0.114,-10.907,31.061)
N3: (1.823,-10.989,32.608)
N7: (2.862,-8.684,35.145)
N9: (3.471,-10.681,34.363)
O5': (6.078,-12.105,37.512)
O3': (6.289,-14.079,33.862)
OP2: (7.020,-13.595,39.245)
C3': (6.174,-13.119,34.886)
C1': (4.223,-11.929,34.235)
C5': (5.312,-13.276,37.255)
O6: (0.439,-7.286,33.821)
O4': (3.856,-12.725,35.347)
C8: (3.702,-9.672,35.265)
C2: (0.795,-10.353,32.075)
C6: (0.918,-8.386,33.525)
C5: (2.025,-9.058,34.105)
C4: (2.388,-10.290,33.611)
P: (6.936,-12.174,38.841)
C4': (5.012,-13.484,35.796)
C2': (5.729,-11.762,34.327)
O2': (6.279,-11.452,33.074)
N1: (0.354,-9.126,32.496)
N2: (0.114,-10.907,31.061)
N3: (1.823,-10.989,32.608)
N7: (2.862,-8.684,35.145)
N9: (3.471,-10.681,34.363)
O5': (6.078,-12.105,37.512)
O3': (6.289,-14.079,33.862)
Image (generated by PyMOL):