Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3IVN:B36:B34
Extra
PDB:
ATOM 1 O3' U A 35 -34.115 14.052 11.529 1.00 35.52 O
ATOM 2 P C A 36 -34.175 15.626 11.857 1.00 38.88 P
ATOM 3 OP1 C A 36 -35.605 15.955 12.080 1.00 39.04 O
ATOM 4 OP2 C A 36 -33.442 16.309 10.762 1.00 38.36 O
ATOM 5 O5' C A 36 -33.367 15.763 13.221 1.00 34.33 O
ATOM 6 C5' C A 36 -32.049 15.235 13.334 1.00 32.27 C
ATOM 7 C4' C A 36 -31.248 16.000 14.354 1.00 30.91 C
ATOM 8 O4' C A 36 -31.799 15.856 15.687 1.00 29.79 O
ATOM 9 C3' C A 36 -29.813 15.537 14.482 1.00 29.30 C
ATOM 10 O3' C A 36 -29.052 16.131 13.453 1.00 30.16 O
ATOM 11 C2' C A 36 -29.430 16.002 15.882 1.00 28.32 C
ATOM 12 O2' C A 36 -29.118 17.386 15.862 1.00 28.27 O
ATOM 13 C1' C A 36 -30.750 15.813 16.637 1.00 28.31 C
ATOM 14 N1 C A 36 -30.872 14.580 17.453 1.00 27.31 N
ATOM 15 C2 C A 36 -30.047 14.410 18.569 1.00 26.42 C
ATOM 16 O2 C A 36 -29.210 15.283 18.845 1.00 26.80 O
ATOM 17 N3 C A 36 -30.170 13.292 19.319 1.00 25.25 N
ATOM 18 C4 C A 36 -31.077 12.370 18.999 1.00 26.23 C
ATOM 19 N4 C A 36 -31.162 11.284 19.771 1.00 25.70 N
ATOM 20 C5 C A 36 -31.937 12.521 17.875 1.00 27.57 C
ATOM 21 C6 C A 36 -31.805 13.632 17.140 1.00 27.67 C
ATOM 22 P U A 37 -27.974 15.252 12.661 1.00 32.47 P
ATOM 23 OP1 U A 37 -27.514 16.037 11.487 1.00 33.36 O
ATOM 24 OP2 U A 37 -28.574 13.911 12.449 1.00 29.11 O
ATOM 25 O5' U A 37 -26.838 15.185 13.768 1.00 29.82 O
TER
ATOM 1 O3' U B 33 -37.455 7.907 17.798 1.00 30.05 O
ATOM 2 P G B 34 -37.762 8.056 19.367 1.00 30.66 P
ATOM 3 OP1 G B 34 -38.373 6.781 19.825 1.00 27.87 O
ATOM 4 OP2 G B 34 -38.540 9.314 19.513 1.00 29.62 O
ATOM 5 O5' G B 34 -36.294 8.256 19.961 1.00 28.53 O
ATOM 6 C5' G B 34 -35.739 9.569 19.955 1.00 28.30 C
ATOM 7 C4' G B 34 -34.545 9.752 19.031 1.00 28.77 C
ATOM 8 O4' G B 34 -33.341 9.138 19.577 1.00 27.23 O
ATOM 9 C3' G B 34 -34.696 9.222 17.605 1.00 29.51 C
ATOM 10 O3' G B 34 -34.094 10.130 16.704 1.00 29.69 O
ATOM 11 C2' G B 34 -33.884 7.923 17.642 1.00 29.01 C
ATOM 12 O2' G B 34 -33.370 7.537 16.388 1.00 29.57 O
ATOM 13 C1' G B 34 -32.761 8.287 18.602 1.00 27.11 C
ATOM 14 N9 G B 34 -32.174 7.164 19.332 1.00 26.01 N
ATOM 15 C8 G B 34 -32.822 6.038 19.781 1.00 25.88 C
ATOM 16 N7 G B 34 -32.035 5.210 20.412 1.00 25.12 N
ATOM 17 C5 G B 34 -30.793 5.828 20.378 1.00 25.00 C
ATOM 18 C6 G B 34 -29.545 5.409 20.901 1.00 24.66 C
ATOM 19 O6 G B 34 -29.279 4.377 21.516 1.00 25.49 O
ATOM 20 N1 G B 34 -28.539 6.330 20.648 1.00 24.27 N
ATOM 21 C2 G B 34 -28.708 7.507 19.976 1.00 25.17 C
ATOM 22 N2 G B 34 -27.608 8.259 19.835 1.00 25.36 N
ATOM 23 N3 G B 34 -29.867 7.917 19.482 1.00 25.77 N
ATOM 24 C4 G B 34 -30.860 7.033 19.717 1.00 25.57 C
ATOM 25 P U B 35 -35.065 11.167 15.957 1.00 33.06 P
ATOM 26 OP1 U B 35 -34.590 12.525 16.317 1.00 31.52 O
ATOM 27 OP2 U B 35 -36.448 10.768 16.313 1.00 31.96 O
ATOM 28 O5' U B 35 -34.807 10.872 14.417 1.00 33.68 O
TER
ATOM 2 P C A 36 -34.175 15.626 11.857 1.00 38.88 P
ATOM 3 OP1 C A 36 -35.605 15.955 12.080 1.00 39.04 O
ATOM 4 OP2 C A 36 -33.442 16.309 10.762 1.00 38.36 O
ATOM 5 O5' C A 36 -33.367 15.763 13.221 1.00 34.33 O
ATOM 6 C5' C A 36 -32.049 15.235 13.334 1.00 32.27 C
ATOM 7 C4' C A 36 -31.248 16.000 14.354 1.00 30.91 C
ATOM 8 O4' C A 36 -31.799 15.856 15.687 1.00 29.79 O
ATOM 9 C3' C A 36 -29.813 15.537 14.482 1.00 29.30 C
ATOM 10 O3' C A 36 -29.052 16.131 13.453 1.00 30.16 O
ATOM 11 C2' C A 36 -29.430 16.002 15.882 1.00 28.32 C
ATOM 12 O2' C A 36 -29.118 17.386 15.862 1.00 28.27 O
ATOM 13 C1' C A 36 -30.750 15.813 16.637 1.00 28.31 C
ATOM 14 N1 C A 36 -30.872 14.580 17.453 1.00 27.31 N
ATOM 15 C2 C A 36 -30.047 14.410 18.569 1.00 26.42 C
ATOM 16 O2 C A 36 -29.210 15.283 18.845 1.00 26.80 O
ATOM 17 N3 C A 36 -30.170 13.292 19.319 1.00 25.25 N
ATOM 18 C4 C A 36 -31.077 12.370 18.999 1.00 26.23 C
ATOM 19 N4 C A 36 -31.162 11.284 19.771 1.00 25.70 N
ATOM 20 C5 C A 36 -31.937 12.521 17.875 1.00 27.57 C
ATOM 21 C6 C A 36 -31.805 13.632 17.140 1.00 27.67 C
ATOM 22 P U A 37 -27.974 15.252 12.661 1.00 32.47 P
ATOM 23 OP1 U A 37 -27.514 16.037 11.487 1.00 33.36 O
ATOM 24 OP2 U A 37 -28.574 13.911 12.449 1.00 29.11 O
ATOM 25 O5' U A 37 -26.838 15.185 13.768 1.00 29.82 O
TER
ATOM 1 O3' U B 33 -37.455 7.907 17.798 1.00 30.05 O
ATOM 2 P G B 34 -37.762 8.056 19.367 1.00 30.66 P
ATOM 3 OP1 G B 34 -38.373 6.781 19.825 1.00 27.87 O
ATOM 4 OP2 G B 34 -38.540 9.314 19.513 1.00 29.62 O
ATOM 5 O5' G B 34 -36.294 8.256 19.961 1.00 28.53 O
ATOM 6 C5' G B 34 -35.739 9.569 19.955 1.00 28.30 C
ATOM 7 C4' G B 34 -34.545 9.752 19.031 1.00 28.77 C
ATOM 8 O4' G B 34 -33.341 9.138 19.577 1.00 27.23 O
ATOM 9 C3' G B 34 -34.696 9.222 17.605 1.00 29.51 C
ATOM 10 O3' G B 34 -34.094 10.130 16.704 1.00 29.69 O
ATOM 11 C2' G B 34 -33.884 7.923 17.642 1.00 29.01 C
ATOM 12 O2' G B 34 -33.370 7.537 16.388 1.00 29.57 O
ATOM 13 C1' G B 34 -32.761 8.287 18.602 1.00 27.11 C
ATOM 14 N9 G B 34 -32.174 7.164 19.332 1.00 26.01 N
ATOM 15 C8 G B 34 -32.822 6.038 19.781 1.00 25.88 C
ATOM 16 N7 G B 34 -32.035 5.210 20.412 1.00 25.12 N
ATOM 17 C5 G B 34 -30.793 5.828 20.378 1.00 25.00 C
ATOM 18 C6 G B 34 -29.545 5.409 20.901 1.00 24.66 C
ATOM 19 O6 G B 34 -29.279 4.377 21.516 1.00 25.49 O
ATOM 20 N1 G B 34 -28.539 6.330 20.648 1.00 24.27 N
ATOM 21 C2 G B 34 -28.708 7.507 19.976 1.00 25.17 C
ATOM 22 N2 G B 34 -27.608 8.259 19.835 1.00 25.36 N
ATOM 23 N3 G B 34 -29.867 7.917 19.482 1.00 25.77 N
ATOM 24 C4 G B 34 -30.860 7.033 19.717 1.00 25.57 C
ATOM 25 P U B 35 -35.065 11.167 15.957 1.00 33.06 P
ATOM 26 OP1 U B 35 -34.590 12.525 16.317 1.00 31.52 O
ATOM 27 OP2 U B 35 -36.448 10.768 16.313 1.00 31.96 O
ATOM 28 O5' U B 35 -34.807 10.872 14.417 1.00 33.68 O
TER
Atoms:
C2: (-30.047,14.410,18.569)
OP1: (-35.605,15.955,12.080)
OP2: (-33.442,16.309,10.762)
C4: (-31.077,12.370,18.999)
O5': (-33.367,15.763,13.221)
C3': (-29.813,15.537,14.482)
C1': (-30.750,15.813,16.637)
O4': (-31.799,15.856,15.687)
C5': (-32.049,15.235,13.334)
P: (-34.175,15.626,11.857)
O2: (-29.210,15.283,18.845)
C4': (-31.248,16.000,14.354)
C2': (-29.430,16.002,15.882)
O2': (-29.118,17.386,15.862)
N1: (-30.872,14.580,17.453)
N3: (-30.170,13.292,19.319)
N4: (-31.162,11.284,19.771)
C6: (-31.805,13.632,17.140)
C5: (-31.937,12.521,17.875)
O3': (-29.052,16.131,13.453)
OP1: (-35.605,15.955,12.080)
OP2: (-33.442,16.309,10.762)
C4: (-31.077,12.370,18.999)
O5': (-33.367,15.763,13.221)
C3': (-29.813,15.537,14.482)
C1': (-30.750,15.813,16.637)
O4': (-31.799,15.856,15.687)
C5': (-32.049,15.235,13.334)
P: (-34.175,15.626,11.857)
O2: (-29.210,15.283,18.845)
C4': (-31.248,16.000,14.354)
C2': (-29.430,16.002,15.882)
O2': (-29.118,17.386,15.862)
N1: (-30.872,14.580,17.453)
N3: (-30.170,13.292,19.319)
N4: (-31.162,11.284,19.771)
C6: (-31.805,13.632,17.140)
C5: (-31.937,12.521,17.875)
O3': (-29.052,16.131,13.453)
OP1: (-38.373,6.781,19.825)
OP2: (-38.540,9.314,19.513)
C3': (-34.696,9.222,17.605)
C1': (-32.761,8.287,18.602)
C5': (-35.739,9.569,19.955)
O6: (-29.279,4.377,21.516)
O4': (-33.341,9.138,19.577)
C8: (-32.822,6.038,19.781)
C2: (-28.708,7.507,19.976)
C6: (-29.545,5.409,20.901)
C5: (-30.793,5.828,20.378)
C4: (-30.860,7.033,19.717)
P: (-37.762,8.056,19.367)
C4': (-34.545,9.752,19.031)
C2': (-33.884,7.923,17.642)
O2': (-33.370,7.537,16.388)
N1: (-28.539,6.330,20.648)
N2: (-27.608,8.259,19.835)
N3: (-29.867,7.917,19.482)
N7: (-32.035,5.210,20.412)
N9: (-32.174,7.164,19.332)
O5': (-36.294,8.256,19.961)
O3': (-34.094,10.130,16.704)
OP2: (-38.540,9.314,19.513)
C3': (-34.696,9.222,17.605)
C1': (-32.761,8.287,18.602)
C5': (-35.739,9.569,19.955)
O6: (-29.279,4.377,21.516)
O4': (-33.341,9.138,19.577)
C8: (-32.822,6.038,19.781)
C2: (-28.708,7.507,19.976)
C6: (-29.545,5.409,20.901)
C5: (-30.793,5.828,20.378)
C4: (-30.860,7.033,19.717)
P: (-37.762,8.056,19.367)
C4': (-34.545,9.752,19.031)
C2': (-33.884,7.923,17.642)
O2': (-33.370,7.537,16.388)
N1: (-28.539,6.330,20.648)
N2: (-27.608,8.259,19.835)
N3: (-29.867,7.917,19.482)
N7: (-32.035,5.210,20.412)
N9: (-32.174,7.164,19.332)
O5': (-36.294,8.256,19.961)
O3': (-34.094,10.130,16.704)
Image (generated by PyMOL):