Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3PDR:X21:X19
Extra
PDB:
ATOM 1 O3' C A 20 10.293 -0.458 27.259 1.00 35.80 O
ATOM 2 P C A 21 8.771 -0.487 27.802 1.00 37.14 P
ATOM 3 OP1 C A 21 8.338 -1.896 27.682 1.00 44.37 O
ATOM 4 OP2 C A 21 8.021 0.556 27.085 1.00 36.78 O
ATOM 5 O5' C A 21 8.870 -0.061 29.331 1.00 38.51 O
ATOM 6 C5' C A 21 9.435 -0.885 30.338 1.00 37.98 C
ATOM 7 C4' C A 21 9.514 -0.137 31.647 1.00 38.80 C
ATOM 8 O4' C A 21 10.451 0.973 31.533 1.00 36.13 O
ATOM 9 C3' C A 21 8.224 0.524 32.106 1.00 39.04 C
ATOM 10 O3' C A 21 7.319 -0.385 32.710 1.00 38.35 O
ATOM 11 C2' C A 21 8.739 1.617 33.038 1.00 40.85 C
ATOM 12 O2' C A 21 9.131 1.074 34.290 1.00 36.56 O
ATOM 13 C1' C A 21 10.002 2.071 32.296 1.00 36.61 C
ATOM 14 N1 C A 21 9.699 3.215 31.403 1.00 35.38 N
ATOM 15 C2 C A 21 9.597 4.490 31.966 1.00 36.68 C
ATOM 16 O2 C A 21 9.778 4.614 33.185 1.00 37.98 O
ATOM 17 N3 C A 21 9.301 5.553 31.177 1.00 33.40 N
ATOM 18 C4 C A 21 9.113 5.371 29.868 1.00 32.53 C
ATOM 19 N4 C A 21 8.821 6.438 29.128 1.00 31.70 N
ATOM 20 C5 C A 21 9.201 4.086 29.265 1.00 34.13 C
ATOM 21 C6 C A 21 9.491 3.046 30.064 1.00 34.60 C
ATOM 22 P U A 22 5.743 -0.103 32.682 1.00 40.17 P
ATOM 23 OP1 U A 22 5.233 -1.395 33.189 1.00 40.86 O
ATOM 24 OP2 U A 22 5.326 0.380 31.337 1.00 39.20 O
ATOM 25 O5' U A 22 5.492 1.073 33.731 1.00 38.67 O
TER
ATOM 1 O3' C B 18 12.716 9.069 21.117 1.00 19.86 O
ATOM 2 P U B 19 11.213 8.646 21.487 1.00 23.78 P
ATOM 3 OP1 U B 19 10.941 7.486 20.601 1.00 25.08 O
ATOM 4 OP2 U B 19 10.307 9.821 21.446 1.00 22.82 O
ATOM 5 O5' U B 19 11.335 8.132 22.984 1.00 21.38 O
ATOM 6 C5' U B 19 12.118 6.988 23.290 1.00 23.62 C
ATOM 7 C4' U B 19 11.764 6.490 24.665 1.00 25.21 C
ATOM 8 O4' U B 19 12.247 7.458 25.642 1.00 26.50 O
ATOM 9 C3' U B 19 10.259 6.343 24.895 1.00 27.34 C
ATOM 10 O3' U B 19 9.982 5.196 25.693 1.00 31.51 O
ATOM 11 C2' U B 19 9.903 7.592 25.695 1.00 30.91 C
ATOM 12 O2' U B 19 8.780 7.425 26.537 1.00 32.17 O
ATOM 13 C1' U B 19 11.184 7.857 26.494 1.00 25.74 C
ATOM 14 N1 U B 19 11.168 9.289 26.905 1.00 26.30 N
ATOM 15 C2 U B 19 11.282 9.611 28.257 1.00 26.72 C
ATOM 16 O2 U B 19 11.465 8.782 29.127 1.00 27.64 O
ATOM 17 N3 U B 19 11.198 10.950 28.558 1.00 24.77 N
ATOM 18 C4 U B 19 10.983 11.992 27.666 1.00 27.39 C
ATOM 19 O4 U B 19 10.900 13.153 28.082 1.00 26.84 O
ATOM 20 C5 U B 19 10.853 11.586 26.297 1.00 23.01 C
ATOM 21 C6 U B 19 10.930 10.287 25.984 1.00 23.97 C
ATOM 22 P C B 20 9.764 3.734 25.047 1.00 35.87 P
ATOM 23 OP1 C B 20 9.579 3.840 23.582 1.00 32.57 O
ATOM 24 OP2 C B 20 8.652 3.238 25.885 1.00 34.82 O
ATOM 25 O5' C B 20 11.118 2.977 25.417 1.00 29.16 O
TER
ATOM 2 P C A 21 8.771 -0.487 27.802 1.00 37.14 P
ATOM 3 OP1 C A 21 8.338 -1.896 27.682 1.00 44.37 O
ATOM 4 OP2 C A 21 8.021 0.556 27.085 1.00 36.78 O
ATOM 5 O5' C A 21 8.870 -0.061 29.331 1.00 38.51 O
ATOM 6 C5' C A 21 9.435 -0.885 30.338 1.00 37.98 C
ATOM 7 C4' C A 21 9.514 -0.137 31.647 1.00 38.80 C
ATOM 8 O4' C A 21 10.451 0.973 31.533 1.00 36.13 O
ATOM 9 C3' C A 21 8.224 0.524 32.106 1.00 39.04 C
ATOM 10 O3' C A 21 7.319 -0.385 32.710 1.00 38.35 O
ATOM 11 C2' C A 21 8.739 1.617 33.038 1.00 40.85 C
ATOM 12 O2' C A 21 9.131 1.074 34.290 1.00 36.56 O
ATOM 13 C1' C A 21 10.002 2.071 32.296 1.00 36.61 C
ATOM 14 N1 C A 21 9.699 3.215 31.403 1.00 35.38 N
ATOM 15 C2 C A 21 9.597 4.490 31.966 1.00 36.68 C
ATOM 16 O2 C A 21 9.778 4.614 33.185 1.00 37.98 O
ATOM 17 N3 C A 21 9.301 5.553 31.177 1.00 33.40 N
ATOM 18 C4 C A 21 9.113 5.371 29.868 1.00 32.53 C
ATOM 19 N4 C A 21 8.821 6.438 29.128 1.00 31.70 N
ATOM 20 C5 C A 21 9.201 4.086 29.265 1.00 34.13 C
ATOM 21 C6 C A 21 9.491 3.046 30.064 1.00 34.60 C
ATOM 22 P U A 22 5.743 -0.103 32.682 1.00 40.17 P
ATOM 23 OP1 U A 22 5.233 -1.395 33.189 1.00 40.86 O
ATOM 24 OP2 U A 22 5.326 0.380 31.337 1.00 39.20 O
ATOM 25 O5' U A 22 5.492 1.073 33.731 1.00 38.67 O
TER
ATOM 1 O3' C B 18 12.716 9.069 21.117 1.00 19.86 O
ATOM 2 P U B 19 11.213 8.646 21.487 1.00 23.78 P
ATOM 3 OP1 U B 19 10.941 7.486 20.601 1.00 25.08 O
ATOM 4 OP2 U B 19 10.307 9.821 21.446 1.00 22.82 O
ATOM 5 O5' U B 19 11.335 8.132 22.984 1.00 21.38 O
ATOM 6 C5' U B 19 12.118 6.988 23.290 1.00 23.62 C
ATOM 7 C4' U B 19 11.764 6.490 24.665 1.00 25.21 C
ATOM 8 O4' U B 19 12.247 7.458 25.642 1.00 26.50 O
ATOM 9 C3' U B 19 10.259 6.343 24.895 1.00 27.34 C
ATOM 10 O3' U B 19 9.982 5.196 25.693 1.00 31.51 O
ATOM 11 C2' U B 19 9.903 7.592 25.695 1.00 30.91 C
ATOM 12 O2' U B 19 8.780 7.425 26.537 1.00 32.17 O
ATOM 13 C1' U B 19 11.184 7.857 26.494 1.00 25.74 C
ATOM 14 N1 U B 19 11.168 9.289 26.905 1.00 26.30 N
ATOM 15 C2 U B 19 11.282 9.611 28.257 1.00 26.72 C
ATOM 16 O2 U B 19 11.465 8.782 29.127 1.00 27.64 O
ATOM 17 N3 U B 19 11.198 10.950 28.558 1.00 24.77 N
ATOM 18 C4 U B 19 10.983 11.992 27.666 1.00 27.39 C
ATOM 19 O4 U B 19 10.900 13.153 28.082 1.00 26.84 O
ATOM 20 C5 U B 19 10.853 11.586 26.297 1.00 23.01 C
ATOM 21 C6 U B 19 10.930 10.287 25.984 1.00 23.97 C
ATOM 22 P C B 20 9.764 3.734 25.047 1.00 35.87 P
ATOM 23 OP1 C B 20 9.579 3.840 23.582 1.00 32.57 O
ATOM 24 OP2 C B 20 8.652 3.238 25.885 1.00 34.82 O
ATOM 25 O5' C B 20 11.118 2.977 25.417 1.00 29.16 O
TER
Atoms:
C2: (9.597,4.490,31.966)
OP1: (8.338,-1.896,27.682)
OP2: (8.021,0.556,27.085)
C4: (9.113,5.371,29.868)
O5': (8.870,-0.061,29.331)
C3': (8.224,0.524,32.106)
C1': (10.002,2.071,32.296)
O4': (10.451,0.973,31.533)
C5': (9.435,-0.885,30.338)
P: (8.771,-0.487,27.802)
O2: (9.778,4.614,33.185)
C4': (9.514,-0.137,31.647)
C2': (8.739,1.617,33.038)
O2': (9.131,1.074,34.290)
N1: (9.699,3.215,31.403)
N3: (9.301,5.553,31.177)
N4: (8.821,6.438,29.128)
C6: (9.491,3.046,30.064)
C5: (9.201,4.086,29.265)
O3': (7.319,-0.385,32.710)
OP1: (8.338,-1.896,27.682)
OP2: (8.021,0.556,27.085)
C4: (9.113,5.371,29.868)
O5': (8.870,-0.061,29.331)
C3': (8.224,0.524,32.106)
C1': (10.002,2.071,32.296)
O4': (10.451,0.973,31.533)
C5': (9.435,-0.885,30.338)
P: (8.771,-0.487,27.802)
O2: (9.778,4.614,33.185)
C4': (9.514,-0.137,31.647)
C2': (8.739,1.617,33.038)
O2': (9.131,1.074,34.290)
N1: (9.699,3.215,31.403)
N3: (9.301,5.553,31.177)
N4: (8.821,6.438,29.128)
C6: (9.491,3.046,30.064)
C5: (9.201,4.086,29.265)
O3': (7.319,-0.385,32.710)
C4: (10.983,11.992,27.666)
N3: (11.198,10.950,28.558)
OP1: (10.941,7.486,20.601)
OP2: (10.307,9.821,21.446)
C2: (11.282,9.611,28.257)
C1': (11.184,7.857,26.494)
C3': (10.259,6.343,24.895)
O5': (11.335,8.132,22.984)
O4': (12.247,7.458,25.642)
C5': (12.118,6.988,23.290)
P: (11.213,8.646,21.487)
C4': (11.764,6.490,24.665)
C2': (9.903,7.592,25.695)
O2': (8.780,7.425,26.537)
N1: (11.168,9.289,26.905)
O4: (10.900,13.153,28.082)
O2: (11.465,8.782,29.127)
C6: (10.930,10.287,25.984)
C5: (10.853,11.586,26.297)
O3': (9.982,5.196,25.693)
N3: (11.198,10.950,28.558)
OP1: (10.941,7.486,20.601)
OP2: (10.307,9.821,21.446)
C2: (11.282,9.611,28.257)
C1': (11.184,7.857,26.494)
C3': (10.259,6.343,24.895)
O5': (11.335,8.132,22.984)
O4': (12.247,7.458,25.642)
C5': (12.118,6.988,23.290)
P: (11.213,8.646,21.487)
C4': (11.764,6.490,24.665)
C2': (9.903,7.592,25.695)
O2': (8.780,7.425,26.537)
N1: (11.168,9.289,26.905)
O4: (10.900,13.153,28.082)
O2: (11.465,8.782,29.127)
C6: (10.930,10.287,25.984)
C5: (10.853,11.586,26.297)
O3': (9.982,5.196,25.693)
Image (generated by PyMOL):