Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8T:B41:B38
Extra
PDB:
ATOM 1 O3' C A 40 -116.401 165.856 108.605 1.00 44.89 O
ATOM 2 P C A 41 -117.540 166.770 109.278 1.00 50.84 P
ATOM 3 OP1 C A 41 -118.149 167.570 108.191 1.00 50.84 O
ATOM 4 OP2 C A 41 -116.914 167.486 110.422 1.00 50.84 O
ATOM 5 O5' C A 41 -118.593 165.696 109.810 1.00 50.84 O
ATOM 6 C5' C A 41 -119.725 165.359 109.027 1.00 50.84 C
ATOM 7 C4' C A 41 -120.499 164.198 109.604 1.00 50.84 C
ATOM 8 O4' C A 41 -119.591 163.166 110.060 1.00 50.84 O
ATOM 9 C3' C A 41 -121.367 164.468 110.829 1.00 50.84 C
ATOM 10 O3' C A 41 -122.573 165.141 110.527 1.00 50.84 O
ATOM 11 C2' C A 41 -121.584 163.061 111.349 1.00 50.84 C
ATOM 12 O2' C A 41 -122.525 162.371 110.529 1.00 50.84 O
ATOM 13 C1' C A 41 -120.198 162.450 111.117 1.00 50.84 C
ATOM 14 N1 C A 41 -119.331 162.537 112.321 1.00 51.01 N
ATOM 15 C2 C A 41 -119.645 161.753 113.443 1.00 51.01 C
ATOM 16 O2 C A 41 -120.648 161.026 113.416 1.00 51.01 O
ATOM 17 N3 C A 41 -118.856 161.802 114.547 1.00 51.01 N
ATOM 18 C4 C A 41 -117.778 162.590 114.563 1.00 51.01 C
ATOM 19 N4 C A 41 -117.034 162.596 115.675 1.00 51.01 N
ATOM 20 C5 C A 41 -117.427 163.394 113.437 1.00 51.01 C
ATOM 21 C6 C A 41 -118.218 163.333 112.349 1.00 51.01 C
ATOM 22 P G A 42 -122.561 166.717 110.244 1.00 51.19 P
ATOM 23 OP1 G A 42 -123.254 166.929 108.952 1.00 51.19 O
ATOM 24 OP2 G A 42 -121.163 167.174 110.381 1.00 51.19 O
ATOM 25 O5' G A 42 -123.437 167.301 111.442 1.00 51.19 O
TER
ATOM 1 O3' A B 37 -115.450 170.715 116.922 1.00 62.59 O
ATOM 2 P U B 38 -114.291 170.472 115.842 1.00 61.61 P
ATOM 3 OP1 U B 38 -112.992 170.700 116.533 1.00 61.61 O
ATOM 4 OP2 U B 38 -114.619 171.286 114.651 1.00 61.61 O
ATOM 5 O5' U B 38 -114.474 168.934 115.514 1.00 61.61 O
ATOM 6 C5' U B 38 -114.972 168.052 116.512 1.00 61.61 C
ATOM 7 C4' U B 38 -115.621 166.854 115.900 1.00 61.61 C
ATOM 8 O4' U B 38 -116.912 167.242 115.363 1.00 61.61 O
ATOM 9 C3' U B 38 -114.844 166.243 114.744 1.00 61.61 C
ATOM 10 O3' U B 38 -115.001 164.828 114.752 1.00 61.61 O
ATOM 11 C2' U B 38 -115.530 166.837 113.524 1.00 61.61 C
ATOM 12 O2' U B 38 -115.402 166.069 112.352 1.00 61.61 O
ATOM 13 C1' U B 38 -116.971 166.906 113.994 1.00 61.61 C
ATOM 14 N1 U B 38 -117.775 167.923 113.305 1.00 61.71 N
ATOM 15 C2 U B 38 -118.996 167.519 112.805 1.00 61.71 C
ATOM 16 O2 U B 38 -119.417 166.376 112.909 1.00 61.71 O
ATOM 17 N3 U B 38 -119.709 168.510 112.177 1.00 61.71 N
ATOM 18 C4 U B 38 -119.337 169.828 112.000 1.00 61.71 C
ATOM 19 O4 U B 38 -120.117 170.583 111.404 1.00 61.71 O
ATOM 20 C5 U B 38 -118.049 170.165 112.544 1.00 61.71 C
ATOM 21 C6 U B 38 -117.331 169.217 113.164 1.00 61.71 C
ATOM 22 P G B 39 -113.899 163.906 115.473 1.00 65.39 P
ATOM 23 OP1 G B 39 -114.074 162.517 114.955 1.00 65.39 O
ATOM 24 OP2 G B 39 -114.028 164.143 116.929 1.00 65.39 O
ATOM 25 O5' G B 39 -112.527 164.521 114.938 1.00 65.39 O
TER
ATOM 2 P C A 41 -117.540 166.770 109.278 1.00 50.84 P
ATOM 3 OP1 C A 41 -118.149 167.570 108.191 1.00 50.84 O
ATOM 4 OP2 C A 41 -116.914 167.486 110.422 1.00 50.84 O
ATOM 5 O5' C A 41 -118.593 165.696 109.810 1.00 50.84 O
ATOM 6 C5' C A 41 -119.725 165.359 109.027 1.00 50.84 C
ATOM 7 C4' C A 41 -120.499 164.198 109.604 1.00 50.84 C
ATOM 8 O4' C A 41 -119.591 163.166 110.060 1.00 50.84 O
ATOM 9 C3' C A 41 -121.367 164.468 110.829 1.00 50.84 C
ATOM 10 O3' C A 41 -122.573 165.141 110.527 1.00 50.84 O
ATOM 11 C2' C A 41 -121.584 163.061 111.349 1.00 50.84 C
ATOM 12 O2' C A 41 -122.525 162.371 110.529 1.00 50.84 O
ATOM 13 C1' C A 41 -120.198 162.450 111.117 1.00 50.84 C
ATOM 14 N1 C A 41 -119.331 162.537 112.321 1.00 51.01 N
ATOM 15 C2 C A 41 -119.645 161.753 113.443 1.00 51.01 C
ATOM 16 O2 C A 41 -120.648 161.026 113.416 1.00 51.01 O
ATOM 17 N3 C A 41 -118.856 161.802 114.547 1.00 51.01 N
ATOM 18 C4 C A 41 -117.778 162.590 114.563 1.00 51.01 C
ATOM 19 N4 C A 41 -117.034 162.596 115.675 1.00 51.01 N
ATOM 20 C5 C A 41 -117.427 163.394 113.437 1.00 51.01 C
ATOM 21 C6 C A 41 -118.218 163.333 112.349 1.00 51.01 C
ATOM 22 P G A 42 -122.561 166.717 110.244 1.00 51.19 P
ATOM 23 OP1 G A 42 -123.254 166.929 108.952 1.00 51.19 O
ATOM 24 OP2 G A 42 -121.163 167.174 110.381 1.00 51.19 O
ATOM 25 O5' G A 42 -123.437 167.301 111.442 1.00 51.19 O
TER
ATOM 1 O3' A B 37 -115.450 170.715 116.922 1.00 62.59 O
ATOM 2 P U B 38 -114.291 170.472 115.842 1.00 61.61 P
ATOM 3 OP1 U B 38 -112.992 170.700 116.533 1.00 61.61 O
ATOM 4 OP2 U B 38 -114.619 171.286 114.651 1.00 61.61 O
ATOM 5 O5' U B 38 -114.474 168.934 115.514 1.00 61.61 O
ATOM 6 C5' U B 38 -114.972 168.052 116.512 1.00 61.61 C
ATOM 7 C4' U B 38 -115.621 166.854 115.900 1.00 61.61 C
ATOM 8 O4' U B 38 -116.912 167.242 115.363 1.00 61.61 O
ATOM 9 C3' U B 38 -114.844 166.243 114.744 1.00 61.61 C
ATOM 10 O3' U B 38 -115.001 164.828 114.752 1.00 61.61 O
ATOM 11 C2' U B 38 -115.530 166.837 113.524 1.00 61.61 C
ATOM 12 O2' U B 38 -115.402 166.069 112.352 1.00 61.61 O
ATOM 13 C1' U B 38 -116.971 166.906 113.994 1.00 61.61 C
ATOM 14 N1 U B 38 -117.775 167.923 113.305 1.00 61.71 N
ATOM 15 C2 U B 38 -118.996 167.519 112.805 1.00 61.71 C
ATOM 16 O2 U B 38 -119.417 166.376 112.909 1.00 61.71 O
ATOM 17 N3 U B 38 -119.709 168.510 112.177 1.00 61.71 N
ATOM 18 C4 U B 38 -119.337 169.828 112.000 1.00 61.71 C
ATOM 19 O4 U B 38 -120.117 170.583 111.404 1.00 61.71 O
ATOM 20 C5 U B 38 -118.049 170.165 112.544 1.00 61.71 C
ATOM 21 C6 U B 38 -117.331 169.217 113.164 1.00 61.71 C
ATOM 22 P G B 39 -113.899 163.906 115.473 1.00 65.39 P
ATOM 23 OP1 G B 39 -114.074 162.517 114.955 1.00 65.39 O
ATOM 24 OP2 G B 39 -114.028 164.143 116.929 1.00 65.39 O
ATOM 25 O5' G B 39 -112.527 164.521 114.938 1.00 65.39 O
TER
Atoms:
C2: (-119.645,161.753,113.443)
OP1: (-118.149,167.570,108.191)
OP2: (-116.914,167.486,110.422)
C4: (-117.778,162.590,114.563)
O5': (-118.593,165.696,109.810)
C3': (-121.367,164.468,110.829)
C1': (-120.198,162.450,111.117)
O4': (-119.591,163.166,110.060)
C5': (-119.725,165.359,109.027)
P: (-117.540,166.770,109.278)
O2: (-120.648,161.026,113.416)
C4': (-120.499,164.198,109.604)
C2': (-121.584,163.061,111.349)
O2': (-122.525,162.371,110.529)
N1: (-119.331,162.537,112.321)
N3: (-118.856,161.802,114.547)
N4: (-117.034,162.596,115.675)
C6: (-118.218,163.333,112.349)
C5: (-117.427,163.394,113.437)
O3': (-122.573,165.141,110.527)
OP1: (-118.149,167.570,108.191)
OP2: (-116.914,167.486,110.422)
C4: (-117.778,162.590,114.563)
O5': (-118.593,165.696,109.810)
C3': (-121.367,164.468,110.829)
C1': (-120.198,162.450,111.117)
O4': (-119.591,163.166,110.060)
C5': (-119.725,165.359,109.027)
P: (-117.540,166.770,109.278)
O2: (-120.648,161.026,113.416)
C4': (-120.499,164.198,109.604)
C2': (-121.584,163.061,111.349)
O2': (-122.525,162.371,110.529)
N1: (-119.331,162.537,112.321)
N3: (-118.856,161.802,114.547)
N4: (-117.034,162.596,115.675)
C6: (-118.218,163.333,112.349)
C5: (-117.427,163.394,113.437)
O3': (-122.573,165.141,110.527)
C4: (-119.337,169.828,112.000)
N3: (-119.709,168.510,112.177)
OP1: (-112.992,170.700,116.533)
OP2: (-114.619,171.286,114.651)
C2: (-118.996,167.519,112.805)
C1': (-116.971,166.906,113.994)
C3': (-114.844,166.243,114.744)
O5': (-114.474,168.934,115.514)
O4': (-116.912,167.242,115.363)
C5': (-114.972,168.052,116.512)
P: (-114.291,170.472,115.842)
C4': (-115.621,166.854,115.900)
C2': (-115.530,166.837,113.524)
O2': (-115.402,166.069,112.352)
N1: (-117.775,167.923,113.305)
O4: (-120.117,170.583,111.404)
O2: (-119.417,166.376,112.909)
C6: (-117.331,169.217,113.164)
C5: (-118.049,170.165,112.544)
O3': (-115.001,164.828,114.752)
N3: (-119.709,168.510,112.177)
OP1: (-112.992,170.700,116.533)
OP2: (-114.619,171.286,114.651)
C2: (-118.996,167.519,112.805)
C1': (-116.971,166.906,113.994)
C3': (-114.844,166.243,114.744)
O5': (-114.474,168.934,115.514)
O4': (-116.912,167.242,115.363)
C5': (-114.972,168.052,116.512)
P: (-114.291,170.472,115.842)
C4': (-115.621,166.854,115.900)
C2': (-115.530,166.837,113.524)
O2': (-115.402,166.069,112.352)
N1: (-117.775,167.923,113.305)
O4: (-120.117,170.583,111.404)
O2: (-119.417,166.376,112.909)
C6: (-117.331,169.217,113.164)
C5: (-118.049,170.165,112.544)
O3': (-115.001,164.828,114.752)
Image (generated by PyMOL):