ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2J03:A1967:A1968

Extra

PDB:
ATOM 1 O3' C A1966 -69.099 -68.422 -12.028 1.00 1.27 O
ATOM 2 P A A1967 -69.220 -67.489 -10.756 1.00 2.13 P
ATOM 3 OP1 A A1967 -68.149 -66.476 -10.860 1.00 2.13 O
ATOM 4 OP2 A A1967 -69.320 -68.320 -9.552 1.00 2.13 O
ATOM 5 O5' A A1967 -70.649 -66.826 -10.892 1.00 1.23 O
ATOM 6 C5' A A1967 -71.453 -66.637 -9.717 1.00 1.23 C
ATOM 7 C4' A A1967 -72.527 -67.679 -9.659 1.00 1.23 C
ATOM 8 O4' A A1967 -71.908 -68.981 -9.629 1.00 1.23 O
ATOM 9 C3' A A1967 -73.474 -67.613 -8.468 1.00 1.23 C
ATOM 10 O3' A A1967 -74.755 -67.979 -8.911 1.00 1.23 O
ATOM 11 C2' A A1967 -72.984 -68.726 -7.553 1.00 1.23 C
ATOM 12 O2' A A1967 -74.055 -69.277 -6.797 1.00 1.23 O
ATOM 13 C1' A A1967 -72.459 -69.737 -8.573 1.00 1.23 C
ATOM 14 N9 A A1967 -71.441 -70.668 -8.080 1.00 9.79 N
ATOM 15 C8 A A1967 -70.085 -70.606 -8.250 1.00 9.79 C
ATOM 16 N7 A A1967 -69.440 -71.619 -7.733 1.00 9.79 N
ATOM 17 C5 A A1967 -70.437 -72.399 -7.167 1.00 9.79 C
ATOM 18 C6 A A1967 -70.399 -73.604 -6.463 1.00 9.79 C
ATOM 19 N6 A A1967 -69.281 -74.250 -6.169 1.00 9.79 N
ATOM 20 N1 A A1967 -71.565 -74.124 -6.055 1.00 9.79 N
ATOM 21 C2 A A1967 -72.692 -73.455 -6.314 1.00 9.79 C
ATOM 22 N3 A A1967 -72.859 -72.303 -6.946 1.00 9.79 N
ATOM 23 C4 A A1967 -71.675 -71.822 -7.364 1.00 9.79 C
ATOM 24 P G A1968 -75.979 -66.989 -8.684 1.00 0.79 P
ATOM 25 OP1 G A1968 -76.205 -66.327 -10.001 1.00 4.17 O
ATOM 26 OP2 G A1968 -75.735 -66.184 -7.454 1.00 4.17 O
ATOM 27 O5' G A1968 -77.221 -67.922 -8.399 1.00 0.92 O
TER

ATOM 1 O3' A B1967 -74.755 -67.979 -8.911 1.00 1.23 O
ATOM 2 P G B1968 -75.979 -66.989 -8.684 1.00 0.79 P
ATOM 3 OP1 G B1968 -76.205 -66.327 -10.001 1.00 4.17 O
ATOM 4 OP2 G B1968 -75.735 -66.184 -7.454 1.00 4.17 O
ATOM 5 O5' G B1968 -77.221 -67.922 -8.399 1.00 0.92 O
ATOM 6 C5' G B1968 -78.528 -67.483 -8.701 1.00 0.92 C
ATOM 7 C4' G B1968 -79.500 -68.611 -8.506 1.00 0.92 C
ATOM 8 O4' G B1968 -79.132 -69.743 -9.341 1.00 0.92 O
ATOM 9 C3' G B1968 -79.560 -69.203 -7.110 1.00 0.92 C
ATOM 10 O3' G B1968 -80.375 -68.430 -6.259 1.00 0.92 O
ATOM 11 C2' G B1968 -80.155 -70.580 -7.375 1.00 0.92 C
ATOM 12 O2' G B1968 -81.552 -70.508 -7.580 1.00 0.92 O
ATOM 13 C1' G B1968 -79.463 -70.957 -8.681 1.00 0.92 C
ATOM 14 N9 G B1968 -78.226 -71.656 -8.374 1.00 3.64 N
ATOM 15 C8 G B1968 -76.945 -71.176 -8.475 1.00 3.64 C
ATOM 16 N7 G B1968 -76.048 -72.014 -8.036 1.00 3.64 N
ATOM 17 C5 G B1968 -76.782 -73.119 -7.643 1.00 3.64 C
ATOM 18 C6 G B1968 -76.361 -74.334 -7.079 1.00 3.64 C
ATOM 19 O6 G B1968 -75.224 -74.684 -6.804 1.00 3.64 O
ATOM 20 N1 G B1968 -77.430 -75.183 -6.831 1.00 3.64 N
ATOM 21 C2 G B1968 -78.743 -74.888 -7.096 1.00 3.64 C
ATOM 22 N2 G B1968 -79.647 -75.827 -6.788 1.00 3.64 N
ATOM 23 N3 G B1968 -79.151 -73.749 -7.626 1.00 3.64 N
ATOM 24 C4 G B1968 -78.125 -72.918 -7.869 1.00 3.64 C
ATOM 25 P G B1969 -80.184 -68.542 -4.678 1.00 3.54 P
ATOM 26 OP1 G B1969 -81.233 -67.678 -4.076 1.00 11.89 O
ATOM 27 OP2 G B1969 -78.751 -68.312 -4.353 1.00 11.89 O
ATOM 28 O5' G B1969 -80.593 -70.040 -4.326 1.00 1.96 O
TER

Atoms:
OP1: (-68.149,-66.476,-10.860)
OP2: (-69.320,-68.320,-9.552)
C3': (-73.474,-67.613,-8.468)
C1': (-72.459,-69.737,-8.573)
C5': (-71.453,-66.637,-9.717)
O4': (-71.908,-68.981,-9.629)
C8: (-70.085,-70.606,-8.250)
O2': (-74.055,-69.277,-6.797)
C6: (-70.399,-73.604,-6.463)
C5: (-70.437,-72.399,-7.167)
C4: (-71.675,-71.822,-7.364)
P: (-69.220,-67.489,-10.756)
C4': (-72.527,-67.679,-9.659)
C2': (-72.984,-68.726,-7.553)
C2: (-72.692,-73.455,-6.314)
N1: (-71.565,-74.124,-6.055)
N3: (-72.859,-72.303,-6.946)
N6: (-69.281,-74.250,-6.169)
N7: (-69.440,-71.619,-7.733)
N9: (-71.441,-70.668,-8.080)
O5': (-70.649,-66.826,-10.892)
O3': (-74.755,-67.979,-8.911)
OP1: (-76.205,-66.327,-10.001)
OP2: (-75.735,-66.184,-7.454)
C3': (-79.560,-69.203,-7.110)
C1': (-79.463,-70.957,-8.681)
C5': (-78.528,-67.483,-8.701)
O6: (-75.224,-74.684,-6.804)
O4': (-79.132,-69.743,-9.341)
C8: (-76.945,-71.176,-8.475)
C2: (-78.743,-74.888,-7.096)
C6: (-76.361,-74.334,-7.079)
C5: (-76.782,-73.119,-7.643)
C4: (-78.125,-72.918,-7.869)
P: (-75.979,-66.989,-8.684)
C4': (-79.500,-68.611,-8.506)
C2': (-80.155,-70.580,-7.375)
O2': (-81.552,-70.508,-7.580)
N1: (-77.430,-75.183,-6.831)
N2: (-79.647,-75.827,-6.788)
N3: (-79.151,-73.749,-7.626)
N7: (-76.048,-72.014,-8.036)
N9: (-78.226,-71.656,-8.374)
O5': (-77.221,-67.922,-8.399)
O3': (-80.375,-68.430,-6.259)
Image (generated by PyMOL):
PyMOL image
show in jmol