Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A429:A430
Extra
PDB:
ATOM 1 O3' C A 428 56.327 121.752 38.400 1.00 52.76 O
ATOM 2 P A A 429 54.913 122.283 38.956 1.00 55.47 P
ATOM 3 OP1 A A 429 55.016 122.498 40.419 1.00 55.09 O
ATOM 4 OP2 A A 429 53.844 121.395 38.424 1.00 55.75 O
ATOM 5 O5' A A 429 54.758 123.714 38.280 1.00 54.05 O
ATOM 6 C5' A A 429 55.710 124.769 38.522 1.00 55.03 C
ATOM 7 C4' A A 429 55.394 125.950 37.633 1.00 55.24 C
ATOM 8 O4' A A 429 55.388 125.485 36.254 1.00 56.53 O
ATOM 9 C3' A A 429 54.021 126.587 37.851 1.00 55.16 C
ATOM 10 O3' A A 429 54.061 127.960 37.484 1.00 54.20 O
ATOM 11 C2' A A 429 53.135 125.787 36.901 1.00 55.56 C
ATOM 12 O2' A A 429 51.932 126.388 36.473 1.00 53.58 O
ATOM 13 C1' A A 429 54.074 125.565 35.722 1.00 57.50 C
ATOM 14 N9 A A 429 53.767 124.293 35.084 1.00 60.67 N
ATOM 15 C8 A A 429 53.771 123.038 35.653 1.00 60.94 C
ATOM 16 N7 A A 429 53.424 122.084 34.830 1.00 61.68 N
ATOM 17 C5 A A 429 53.169 122.752 33.642 1.00 62.48 C
ATOM 18 C6 A A 429 52.751 122.303 32.399 1.00 62.87 C
ATOM 19 N6 A A 429 52.460 121.027 32.150 1.00 63.66 N
ATOM 20 N1 A A 429 52.630 123.210 31.406 1.00 63.73 N
ATOM 21 C2 A A 429 52.889 124.493 31.671 1.00 63.65 C
ATOM 22 N3 A A 429 53.263 125.052 32.818 1.00 63.37 N
ATOM 23 C4 A A 429 53.392 124.111 33.777 1.00 62.31 C
ATOM 24 P A A 430 53.398 129.063 38.441 1.00 53.08 P
ATOM 25 OP1 A A 430 54.031 128.945 39.783 1.00 53.62 O
ATOM 26 OP2 A A 430 51.931 128.983 38.324 1.00 54.14 O
ATOM 27 O5' A A 430 53.815 130.442 37.769 1.00 52.67 O
TER
ATOM 1 O3' A B 429 54.061 127.960 37.484 1.00 54.20 O
ATOM 2 P A B 430 53.398 129.063 38.441 1.00 53.08 P
ATOM 3 OP1 A B 430 54.031 128.945 39.783 1.00 53.62 O
ATOM 4 OP2 A B 430 51.931 128.983 38.324 1.00 54.14 O
ATOM 5 O5' A B 430 53.815 130.442 37.769 1.00 52.67 O
ATOM 6 C5' A B 430 54.939 131.200 38.245 1.00 51.96 C
ATOM 7 C4' A B 430 55.586 131.917 37.097 1.00 52.09 C
ATOM 8 O4' A B 430 56.326 130.972 36.289 1.00 51.31 O
ATOM 9 C3' A B 430 54.596 132.537 36.133 1.00 52.87 C
ATOM 10 O3' A B 430 54.146 133.791 36.624 1.00 55.37 O
ATOM 11 C2' A B 430 55.421 132.636 34.860 1.00 53.27 C
ATOM 12 O2' A B 430 56.316 133.727 34.890 1.00 52.84 O
ATOM 13 C1' A B 430 56.227 131.334 34.922 1.00 53.31 C
ATOM 14 N9 A B 430 55.601 130.226 34.197 1.00 54.77 N
ATOM 15 C8 A B 430 55.115 129.055 34.718 1.00 55.24 C
ATOM 16 N7 A B 430 54.587 128.256 33.826 1.00 54.77 N
ATOM 17 C5 A B 430 54.732 128.948 32.636 1.00 55.86 C
ATOM 18 C6 A B 430 54.348 128.655 31.327 1.00 57.03 C
ATOM 19 N6 A B 430 53.693 127.548 30.981 1.00 58.59 N
ATOM 20 N1 A B 430 54.650 129.555 30.367 1.00 57.18 N
ATOM 21 C2 A B 430 55.279 130.678 30.718 1.00 56.32 C
ATOM 22 N3 A B 430 55.673 131.076 31.917 1.00 56.23 N
ATOM 23 C4 A B 430 55.367 130.155 32.845 1.00 55.50 C
ATOM 24 P C B 431 52.578 134.127 36.633 1.00 56.92 P
ATOM 25 OP1 C B 431 52.451 135.531 37.098 1.00 57.36 O
ATOM 26 OP2 C B 431 51.811 133.055 37.328 1.00 58.71 O
ATOM 27 O5' C B 431 52.209 134.105 35.089 1.00 58.19 O
TER
ATOM 2 P A A 429 54.913 122.283 38.956 1.00 55.47 P
ATOM 3 OP1 A A 429 55.016 122.498 40.419 1.00 55.09 O
ATOM 4 OP2 A A 429 53.844 121.395 38.424 1.00 55.75 O
ATOM 5 O5' A A 429 54.758 123.714 38.280 1.00 54.05 O
ATOM 6 C5' A A 429 55.710 124.769 38.522 1.00 55.03 C
ATOM 7 C4' A A 429 55.394 125.950 37.633 1.00 55.24 C
ATOM 8 O4' A A 429 55.388 125.485 36.254 1.00 56.53 O
ATOM 9 C3' A A 429 54.021 126.587 37.851 1.00 55.16 C
ATOM 10 O3' A A 429 54.061 127.960 37.484 1.00 54.20 O
ATOM 11 C2' A A 429 53.135 125.787 36.901 1.00 55.56 C
ATOM 12 O2' A A 429 51.932 126.388 36.473 1.00 53.58 O
ATOM 13 C1' A A 429 54.074 125.565 35.722 1.00 57.50 C
ATOM 14 N9 A A 429 53.767 124.293 35.084 1.00 60.67 N
ATOM 15 C8 A A 429 53.771 123.038 35.653 1.00 60.94 C
ATOM 16 N7 A A 429 53.424 122.084 34.830 1.00 61.68 N
ATOM 17 C5 A A 429 53.169 122.752 33.642 1.00 62.48 C
ATOM 18 C6 A A 429 52.751 122.303 32.399 1.00 62.87 C
ATOM 19 N6 A A 429 52.460 121.027 32.150 1.00 63.66 N
ATOM 20 N1 A A 429 52.630 123.210 31.406 1.00 63.73 N
ATOM 21 C2 A A 429 52.889 124.493 31.671 1.00 63.65 C
ATOM 22 N3 A A 429 53.263 125.052 32.818 1.00 63.37 N
ATOM 23 C4 A A 429 53.392 124.111 33.777 1.00 62.31 C
ATOM 24 P A A 430 53.398 129.063 38.441 1.00 53.08 P
ATOM 25 OP1 A A 430 54.031 128.945 39.783 1.00 53.62 O
ATOM 26 OP2 A A 430 51.931 128.983 38.324 1.00 54.14 O
ATOM 27 O5' A A 430 53.815 130.442 37.769 1.00 52.67 O
TER
ATOM 1 O3' A B 429 54.061 127.960 37.484 1.00 54.20 O
ATOM 2 P A B 430 53.398 129.063 38.441 1.00 53.08 P
ATOM 3 OP1 A B 430 54.031 128.945 39.783 1.00 53.62 O
ATOM 4 OP2 A B 430 51.931 128.983 38.324 1.00 54.14 O
ATOM 5 O5' A B 430 53.815 130.442 37.769 1.00 52.67 O
ATOM 6 C5' A B 430 54.939 131.200 38.245 1.00 51.96 C
ATOM 7 C4' A B 430 55.586 131.917 37.097 1.00 52.09 C
ATOM 8 O4' A B 430 56.326 130.972 36.289 1.00 51.31 O
ATOM 9 C3' A B 430 54.596 132.537 36.133 1.00 52.87 C
ATOM 10 O3' A B 430 54.146 133.791 36.624 1.00 55.37 O
ATOM 11 C2' A B 430 55.421 132.636 34.860 1.00 53.27 C
ATOM 12 O2' A B 430 56.316 133.727 34.890 1.00 52.84 O
ATOM 13 C1' A B 430 56.227 131.334 34.922 1.00 53.31 C
ATOM 14 N9 A B 430 55.601 130.226 34.197 1.00 54.77 N
ATOM 15 C8 A B 430 55.115 129.055 34.718 1.00 55.24 C
ATOM 16 N7 A B 430 54.587 128.256 33.826 1.00 54.77 N
ATOM 17 C5 A B 430 54.732 128.948 32.636 1.00 55.86 C
ATOM 18 C6 A B 430 54.348 128.655 31.327 1.00 57.03 C
ATOM 19 N6 A B 430 53.693 127.548 30.981 1.00 58.59 N
ATOM 20 N1 A B 430 54.650 129.555 30.367 1.00 57.18 N
ATOM 21 C2 A B 430 55.279 130.678 30.718 1.00 56.32 C
ATOM 22 N3 A B 430 55.673 131.076 31.917 1.00 56.23 N
ATOM 23 C4 A B 430 55.367 130.155 32.845 1.00 55.50 C
ATOM 24 P C B 431 52.578 134.127 36.633 1.00 56.92 P
ATOM 25 OP1 C B 431 52.451 135.531 37.098 1.00 57.36 O
ATOM 26 OP2 C B 431 51.811 133.055 37.328 1.00 58.71 O
ATOM 27 O5' C B 431 52.209 134.105 35.089 1.00 58.19 O
TER
Atoms:
OP1: (55.016,122.498,40.419)
OP2: (53.844,121.395,38.424)
C3': (54.021,126.587,37.851)
C1': (54.074,125.565,35.722)
C5': (55.710,124.769,38.522)
O4': (55.388,125.485,36.254)
C8: (53.771,123.038,35.653)
O2': (51.932,126.388,36.473)
C6: (52.751,122.303,32.399)
C5: (53.169,122.752,33.642)
C4: (53.392,124.111,33.777)
P: (54.913,122.283,38.956)
C4': (55.394,125.950,37.633)
C2': (53.135,125.787,36.901)
C2: (52.889,124.493,31.671)
N1: (52.630,123.210,31.406)
N3: (53.263,125.052,32.818)
N6: (52.460,121.027,32.150)
N7: (53.424,122.084,34.830)
N9: (53.767,124.293,35.084)
O5': (54.758,123.714,38.280)
O3': (54.061,127.960,37.484)
OP2: (53.844,121.395,38.424)
C3': (54.021,126.587,37.851)
C1': (54.074,125.565,35.722)
C5': (55.710,124.769,38.522)
O4': (55.388,125.485,36.254)
C8: (53.771,123.038,35.653)
O2': (51.932,126.388,36.473)
C6: (52.751,122.303,32.399)
C5: (53.169,122.752,33.642)
C4: (53.392,124.111,33.777)
P: (54.913,122.283,38.956)
C4': (55.394,125.950,37.633)
C2': (53.135,125.787,36.901)
C2: (52.889,124.493,31.671)
N1: (52.630,123.210,31.406)
N3: (53.263,125.052,32.818)
N6: (52.460,121.027,32.150)
N7: (53.424,122.084,34.830)
N9: (53.767,124.293,35.084)
O5': (54.758,123.714,38.280)
O3': (54.061,127.960,37.484)
OP1: (54.031,128.945,39.783)
OP2: (51.931,128.983,38.324)
C3': (54.596,132.537,36.133)
C1': (56.227,131.334,34.922)
C5': (54.939,131.200,38.245)
O4': (56.326,130.972,36.289)
C8: (55.115,129.055,34.718)
O2': (56.316,133.727,34.890)
C6: (54.348,128.655,31.327)
C5: (54.732,128.948,32.636)
C4: (55.367,130.155,32.845)
P: (53.398,129.063,38.441)
C4': (55.586,131.917,37.097)
C2': (55.421,132.636,34.860)
C2: (55.279,130.678,30.718)
N1: (54.650,129.555,30.367)
N3: (55.673,131.076,31.917)
N6: (53.693,127.548,30.981)
N7: (54.587,128.256,33.826)
N9: (55.601,130.226,34.197)
O5': (53.815,130.442,37.769)
O3': (54.146,133.791,36.624)
OP2: (51.931,128.983,38.324)
C3': (54.596,132.537,36.133)
C1': (56.227,131.334,34.922)
C5': (54.939,131.200,38.245)
O4': (56.326,130.972,36.289)
C8: (55.115,129.055,34.718)
O2': (56.316,133.727,34.890)
C6: (54.348,128.655,31.327)
C5: (54.732,128.948,32.636)
C4: (55.367,130.155,32.845)
P: (53.398,129.063,38.441)
C4': (55.586,131.917,37.097)
C2': (55.421,132.636,34.860)
C2: (55.279,130.678,30.718)
N1: (54.650,129.555,30.367)
N3: (55.673,131.076,31.917)
N6: (53.693,127.548,30.981)
N7: (54.587,128.256,33.826)
N9: (55.601,130.226,34.197)
O5': (53.815,130.442,37.769)
O3': (54.146,133.791,36.624)
Image (generated by PyMOL):