ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1NJI:A429:A430

Extra

PDB:
ATOM 1 O3' C A 428 56.087 121.813 37.906 1.00 41.55 O
ATOM 2 P A A 429 54.680 122.263 38.552 1.00 43.88 P
ATOM 3 OP1 A A 429 54.876 122.411 40.018 1.00 45.69 O
ATOM 4 OP2 A A 429 53.628 121.355 38.039 1.00 46.02 O
ATOM 5 O5' A A 429 54.408 123.722 37.988 1.00 43.30 O
ATOM 6 C5' A A 429 55.391 124.771 38.120 1.00 44.81 C
ATOM 7 C4' A A 429 55.050 125.899 37.176 1.00 44.70 C
ATOM 8 O4' A A 429 55.056 125.374 35.819 1.00 46.24 O
ATOM 9 C3' A A 429 53.673 126.528 37.372 1.00 44.03 C
ATOM 10 O3' A A 429 53.714 127.896 37.041 1.00 43.06 O
ATOM 11 C2' A A 429 52.796 125.760 36.397 1.00 43.43 C
ATOM 12 O2' A A 429 51.692 126.495 35.922 1.00 42.85 O
ATOM 13 C1' A A 429 53.763 125.477 35.255 1.00 44.97 C
ATOM 14 N9 A A 429 53.442 124.196 34.634 1.00 46.99 N
ATOM 15 C8 A A 429 53.418 122.943 35.213 1.00 46.46 C
ATOM 16 N7 A A 429 53.045 121.992 34.395 1.00 47.38 N
ATOM 17 C5 A A 429 52.810 122.657 33.199 1.00 47.63 C
ATOM 18 C6 A A 429 52.371 122.214 31.948 1.00 46.95 C
ATOM 19 N6 A A 429 52.043 120.947 31.688 1.00 47.76 N
ATOM 20 N1 A A 429 52.267 123.130 30.958 1.00 47.18 N
ATOM 21 C2 A A 429 52.569 124.403 31.225 1.00 46.39 C
ATOM 22 N3 A A 429 52.970 124.948 32.365 1.00 46.50 N
ATOM 23 C4 A A 429 53.072 124.011 33.326 1.00 47.21 C
ATOM 24 P A A 430 53.104 128.964 38.061 1.00 43.15 P
ATOM 25 OP1 A A 430 53.810 128.770 39.355 1.00 44.14 O
ATOM 26 OP2 A A 430 51.632 128.865 38.022 1.00 43.55 O
ATOM 27 O5' A A 430 53.505 130.360 37.407 1.00 42.82 O
TER

ATOM 1 O3' A B 429 53.714 127.896 37.041 1.00 43.06 O
ATOM 2 P A B 430 53.104 128.964 38.061 1.00 43.15 P
ATOM 3 OP1 A B 430 53.810 128.770 39.355 1.00 44.14 O
ATOM 4 OP2 A B 430 51.632 128.865 38.022 1.00 43.55 O
ATOM 5 O5' A B 430 53.505 130.360 37.407 1.00 42.82 O
ATOM 6 C5' A B 430 54.647 131.107 37.874 1.00 43.02 C
ATOM 7 C4' A B 430 55.284 131.839 36.725 1.00 43.95 C
ATOM 8 O4' A B 430 55.976 130.889 35.876 1.00 44.92 O
ATOM 9 C3' A B 430 54.296 132.513 35.795 1.00 45.06 C
ATOM 10 O3' A B 430 53.856 133.772 36.294 1.00 46.78 O
ATOM 11 C2' A B 430 55.072 132.592 34.488 1.00 45.11 C
ATOM 12 O2' A B 430 56.001 133.652 34.472 1.00 45.07 O
ATOM 13 C1' A B 430 55.844 131.271 34.517 1.00 45.97 C
ATOM 14 N9 A B 430 55.215 130.168 33.786 1.00 47.70 N
ATOM 15 C8 A B 430 54.714 129.000 34.309 1.00 48.21 C
ATOM 16 N7 A B 430 54.214 128.188 33.411 1.00 48.02 N
ATOM 17 C5 A B 430 54.391 128.866 32.214 1.00 47.93 C
ATOM 18 C6 A B 430 54.059 128.544 30.891 1.00 47.85 C
ATOM 19 N6 A B 430 53.453 127.412 30.536 1.00 48.67 N
ATOM 20 N1 A B 430 54.372 129.437 29.930 1.00 48.15 N
ATOM 21 C2 A B 430 54.974 130.575 30.287 1.00 49.15 C
ATOM 22 N3 A B 430 55.332 130.998 31.498 1.00 49.06 N
ATOM 23 C4 A B 430 55.009 130.086 32.429 1.00 47.98 C
ATOM 24 P C B 431 52.281 134.104 36.311 1.00 49.14 P
ATOM 25 OP1 C B 431 52.068 135.487 36.824 1.00 48.89 O
ATOM 26 OP2 C B 431 51.563 132.972 36.949 1.00 50.52 O
ATOM 27 O5' C B 431 51.897 134.080 34.767 1.00 48.39 O
TER

Atoms:
OP1: (54.876,122.411,40.018)
OP2: (53.628,121.355,38.039)
C3': (53.673,126.528,37.372)
C1': (53.763,125.477,35.255)
C5': (55.391,124.771,38.120)
O4': (55.056,125.374,35.819)
C8: (53.418,122.943,35.213)
O2': (51.692,126.495,35.922)
C6: (52.371,122.214,31.948)
C5: (52.810,122.657,33.199)
C4: (53.072,124.011,33.326)
P: (54.680,122.263,38.552)
C4': (55.050,125.899,37.176)
C2': (52.796,125.760,36.397)
C2: (52.569,124.403,31.225)
N1: (52.267,123.130,30.958)
N3: (52.970,124.948,32.365)
N6: (52.043,120.947,31.688)
N7: (53.045,121.992,34.395)
N9: (53.442,124.196,34.634)
O5': (54.408,123.722,37.988)
O3': (53.714,127.896,37.041)
OP1: (53.810,128.770,39.355)
OP2: (51.632,128.865,38.022)
C3': (54.296,132.513,35.795)
C1': (55.844,131.271,34.517)
C5': (54.647,131.107,37.874)
O4': (55.976,130.889,35.876)
C8: (54.714,129.000,34.309)
O2': (56.001,133.652,34.472)
C6: (54.059,128.544,30.891)
C5: (54.391,128.866,32.214)
C4: (55.009,130.086,32.429)
P: (53.104,128.964,38.061)
C4': (55.284,131.839,36.725)
C2': (55.072,132.592,34.488)
C2: (54.974,130.575,30.287)
N1: (54.372,129.437,29.930)
N3: (55.332,130.998,31.498)
N6: (53.453,127.412,30.536)
N7: (54.214,128.188,33.411)
N9: (55.215,130.168,33.786)
O5': (53.505,130.360,37.407)
O3': (53.856,133.772,36.294)
Image (generated by PyMOL):
PyMOL image
show in jmol