Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:01092:01188
Extra
PDB:
ATOM 1 O3' A A1091 52.540 92.495 131.518 1.00 43.63 O
ATOM 2 P A A1092 52.230 91.758 132.906 1.00 44.66 P
ATOM 3 OP1 A A1092 51.663 90.428 132.551 1.00 46.03 O
ATOM 4 OP2 A A1092 51.474 92.671 133.806 1.00 43.25 O
ATOM 5 O5' A A1092 53.671 91.520 133.528 1.00 43.92 O
ATOM 6 C5' A A1092 54.602 90.650 132.878 1.00 42.75 C
ATOM 7 C4' A A1092 55.983 90.894 133.408 1.00 43.69 C
ATOM 8 O4' A A1092 56.330 92.283 133.178 1.00 44.89 O
ATOM 9 C3' A A1092 56.146 90.722 134.908 1.00 42.97 C
ATOM 10 O3' A A1092 56.341 89.355 135.251 1.00 44.40 O
ATOM 11 C2' A A1092 57.385 91.560 135.180 1.00 42.81 C
ATOM 12 O2' A A1092 58.561 90.889 134.777 1.00 41.21 O
ATOM 13 C1' A A1092 57.152 92.745 134.238 1.00 42.80 C
ATOM 14 N9 A A1092 56.487 93.884 134.872 1.00 40.09 N
ATOM 15 C8 A A1092 55.142 94.106 135.039 1.00 39.24 C
ATOM 16 N7 A A1092 54.864 95.234 135.648 1.00 38.52 N
ATOM 17 C5 A A1092 56.110 95.792 135.899 1.00 37.94 C
ATOM 18 C6 A A1092 56.503 96.991 136.521 1.00 38.54 C
ATOM 19 N6 A A1092 55.645 97.882 137.032 1.00 38.05 N
ATOM 20 N1 A A1092 57.828 97.248 136.605 1.00 37.83 N
ATOM 21 C2 A A1092 58.688 96.352 136.100 1.00 36.95 C
ATOM 22 N3 A A1092 58.441 95.194 135.499 1.00 37.60 N
ATOM 23 C4 A A1092 57.118 94.971 135.427 1.00 37.92 C
ATOM 24 P G A1093 55.569 88.730 136.515 1.00 45.59 P
ATOM 25 OP1 G A1093 56.299 87.485 136.857 1.00 45.93 O
ATOM 26 OP2 G A1093 54.106 88.671 136.248 1.00 44.64 O
ATOM 27 O5' G A1093 55.811 89.797 137.672 1.00 45.49 O
TER
ATOM 1 O3' C B1187 50.683 104.424 141.230 1.00 41.09 O
ATOM 2 P C B1188 51.230 105.148 139.908 1.00 41.88 P
ATOM 3 OP1 C B1188 51.986 106.338 140.368 1.00 38.93 O
ATOM 4 OP2 C B1188 50.101 105.318 138.959 1.00 41.29 O
ATOM 5 O5' C B1188 52.259 104.094 139.309 1.00 39.99 O
ATOM 6 C5' C B1188 53.463 103.769 140.023 1.00 39.17 C
ATOM 7 C4' C B1188 54.121 102.562 139.414 1.00 38.81 C
ATOM 8 O4' C B1188 53.219 101.431 139.507 1.00 39.28 O
ATOM 9 C3' C B1188 54.438 102.666 137.934 1.00 40.05 C
ATOM 10 O3' C B1188 55.664 103.363 137.736 1.00 42.01 O
ATOM 11 C2' C B1188 54.498 101.200 137.517 1.00 40.00 C
ATOM 12 O2' C B1188 55.713 100.565 137.863 1.00 39.26 O
ATOM 13 C1' C B1188 53.373 100.603 138.368 1.00 39.19 C
ATOM 14 N1 C B1188 52.075 100.533 137.676 1.00 39.79 N
ATOM 15 C2 C B1188 51.737 99.363 136.988 1.00 40.66 C
ATOM 16 O2 C B1188 52.554 98.428 136.948 1.00 42.71 O
ATOM 17 N3 C B1188 50.534 99.283 136.376 1.00 40.34 N
ATOM 18 C4 C B1188 49.692 100.316 136.421 1.00 40.00 C
ATOM 19 N4 C B1188 48.512 100.187 135.814 1.00 40.95 N
ATOM 20 C5 C B1188 50.020 101.526 137.094 1.00 39.84 C
ATOM 21 C6 C B1188 51.207 101.590 137.705 1.00 39.75 C
ATOM 22 P A B1189 55.977 104.058 136.317 1.00 43.68 P
ATOM 23 OP1 A B1189 55.797 103.038 135.249 1.00 43.59 O
ATOM 24 OP2 A B1189 57.282 104.750 136.459 1.00 42.68 O
ATOM 25 O5' A B1189 54.850 105.172 136.144 1.00 41.48 O
TER
ATOM 2 P A A1092 52.230 91.758 132.906 1.00 44.66 P
ATOM 3 OP1 A A1092 51.663 90.428 132.551 1.00 46.03 O
ATOM 4 OP2 A A1092 51.474 92.671 133.806 1.00 43.25 O
ATOM 5 O5' A A1092 53.671 91.520 133.528 1.00 43.92 O
ATOM 6 C5' A A1092 54.602 90.650 132.878 1.00 42.75 C
ATOM 7 C4' A A1092 55.983 90.894 133.408 1.00 43.69 C
ATOM 8 O4' A A1092 56.330 92.283 133.178 1.00 44.89 O
ATOM 9 C3' A A1092 56.146 90.722 134.908 1.00 42.97 C
ATOM 10 O3' A A1092 56.341 89.355 135.251 1.00 44.40 O
ATOM 11 C2' A A1092 57.385 91.560 135.180 1.00 42.81 C
ATOM 12 O2' A A1092 58.561 90.889 134.777 1.00 41.21 O
ATOM 13 C1' A A1092 57.152 92.745 134.238 1.00 42.80 C
ATOM 14 N9 A A1092 56.487 93.884 134.872 1.00 40.09 N
ATOM 15 C8 A A1092 55.142 94.106 135.039 1.00 39.24 C
ATOM 16 N7 A A1092 54.864 95.234 135.648 1.00 38.52 N
ATOM 17 C5 A A1092 56.110 95.792 135.899 1.00 37.94 C
ATOM 18 C6 A A1092 56.503 96.991 136.521 1.00 38.54 C
ATOM 19 N6 A A1092 55.645 97.882 137.032 1.00 38.05 N
ATOM 20 N1 A A1092 57.828 97.248 136.605 1.00 37.83 N
ATOM 21 C2 A A1092 58.688 96.352 136.100 1.00 36.95 C
ATOM 22 N3 A A1092 58.441 95.194 135.499 1.00 37.60 N
ATOM 23 C4 A A1092 57.118 94.971 135.427 1.00 37.92 C
ATOM 24 P G A1093 55.569 88.730 136.515 1.00 45.59 P
ATOM 25 OP1 G A1093 56.299 87.485 136.857 1.00 45.93 O
ATOM 26 OP2 G A1093 54.106 88.671 136.248 1.00 44.64 O
ATOM 27 O5' G A1093 55.811 89.797 137.672 1.00 45.49 O
TER
ATOM 1 O3' C B1187 50.683 104.424 141.230 1.00 41.09 O
ATOM 2 P C B1188 51.230 105.148 139.908 1.00 41.88 P
ATOM 3 OP1 C B1188 51.986 106.338 140.368 1.00 38.93 O
ATOM 4 OP2 C B1188 50.101 105.318 138.959 1.00 41.29 O
ATOM 5 O5' C B1188 52.259 104.094 139.309 1.00 39.99 O
ATOM 6 C5' C B1188 53.463 103.769 140.023 1.00 39.17 C
ATOM 7 C4' C B1188 54.121 102.562 139.414 1.00 38.81 C
ATOM 8 O4' C B1188 53.219 101.431 139.507 1.00 39.28 O
ATOM 9 C3' C B1188 54.438 102.666 137.934 1.00 40.05 C
ATOM 10 O3' C B1188 55.664 103.363 137.736 1.00 42.01 O
ATOM 11 C2' C B1188 54.498 101.200 137.517 1.00 40.00 C
ATOM 12 O2' C B1188 55.713 100.565 137.863 1.00 39.26 O
ATOM 13 C1' C B1188 53.373 100.603 138.368 1.00 39.19 C
ATOM 14 N1 C B1188 52.075 100.533 137.676 1.00 39.79 N
ATOM 15 C2 C B1188 51.737 99.363 136.988 1.00 40.66 C
ATOM 16 O2 C B1188 52.554 98.428 136.948 1.00 42.71 O
ATOM 17 N3 C B1188 50.534 99.283 136.376 1.00 40.34 N
ATOM 18 C4 C B1188 49.692 100.316 136.421 1.00 40.00 C
ATOM 19 N4 C B1188 48.512 100.187 135.814 1.00 40.95 N
ATOM 20 C5 C B1188 50.020 101.526 137.094 1.00 39.84 C
ATOM 21 C6 C B1188 51.207 101.590 137.705 1.00 39.75 C
ATOM 22 P A B1189 55.977 104.058 136.317 1.00 43.68 P
ATOM 23 OP1 A B1189 55.797 103.038 135.249 1.00 43.59 O
ATOM 24 OP2 A B1189 57.282 104.750 136.459 1.00 42.68 O
ATOM 25 O5' A B1189 54.850 105.172 136.144 1.00 41.48 O
TER
Atoms:
OP1: (51.663,90.428,132.551)
OP2: (51.474,92.671,133.806)
C3': (56.146,90.722,134.908)
C1': (57.152,92.745,134.238)
C5': (54.602,90.650,132.878)
O4': (56.330,92.283,133.178)
C8: (55.142,94.106,135.039)
O2': (58.561,90.889,134.777)
C6: (56.503,96.991,136.521)
C5: (56.110,95.792,135.899)
C4: (57.118,94.971,135.427)
P: (52.230,91.758,132.906)
C4': (55.983,90.894,133.408)
C2': (57.385,91.560,135.180)
C2: (58.688,96.352,136.100)
N1: (57.828,97.248,136.605)
N3: (58.441,95.194,135.499)
N6: (55.645,97.882,137.032)
N7: (54.864,95.234,135.648)
N9: (56.487,93.884,134.872)
O5': (53.671,91.520,133.528)
O3': (56.341,89.355,135.251)
OP2: (51.474,92.671,133.806)
C3': (56.146,90.722,134.908)
C1': (57.152,92.745,134.238)
C5': (54.602,90.650,132.878)
O4': (56.330,92.283,133.178)
C8: (55.142,94.106,135.039)
O2': (58.561,90.889,134.777)
C6: (56.503,96.991,136.521)
C5: (56.110,95.792,135.899)
C4: (57.118,94.971,135.427)
P: (52.230,91.758,132.906)
C4': (55.983,90.894,133.408)
C2': (57.385,91.560,135.180)
C2: (58.688,96.352,136.100)
N1: (57.828,97.248,136.605)
N3: (58.441,95.194,135.499)
N6: (55.645,97.882,137.032)
N7: (54.864,95.234,135.648)
N9: (56.487,93.884,134.872)
O5': (53.671,91.520,133.528)
O3': (56.341,89.355,135.251)
C2: (51.737,99.363,136.988)
OP1: (51.986,106.338,140.368)
OP2: (50.101,105.318,138.959)
C4: (49.692,100.316,136.421)
O5': (52.259,104.094,139.309)
C3': (54.438,102.666,137.934)
C1': (53.373,100.603,138.368)
O4': (53.219,101.431,139.507)
C5': (53.463,103.769,140.023)
P: (51.230,105.148,139.908)
O2: (52.554,98.428,136.948)
C4': (54.121,102.562,139.414)
C2': (54.498,101.200,137.517)
O2': (55.713,100.565,137.863)
N1: (52.075,100.533,137.676)
N3: (50.534,99.283,136.376)
N4: (48.512,100.187,135.814)
C6: (51.207,101.590,137.705)
C5: (50.020,101.526,137.094)
O3': (55.664,103.363,137.736)
OP1: (51.986,106.338,140.368)
OP2: (50.101,105.318,138.959)
C4: (49.692,100.316,136.421)
O5': (52.259,104.094,139.309)
C3': (54.438,102.666,137.934)
C1': (53.373,100.603,138.368)
O4': (53.219,101.431,139.507)
C5': (53.463,103.769,140.023)
P: (51.230,105.148,139.908)
O2: (52.554,98.428,136.948)
C4': (54.121,102.562,139.414)
C2': (54.498,101.200,137.517)
O2': (55.713,100.565,137.863)
N1: (52.075,100.533,137.676)
N3: (50.534,99.283,136.376)
N4: (48.512,100.187,135.814)
C6: (51.207,101.590,137.705)
C5: (50.020,101.526,137.094)
O3': (55.664,103.363,137.736)
Image (generated by PyMOL):