Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A1911:A1912
Extra
PDB:
ATOM 1 O3' U A1910 -94.438 -8.723 -8.718 1.00 30.02 O
ATOM 2 P A A1911 -94.870 -8.410 -7.211 1.00 31.13 P
ATOM 3 OP1 A A1911 -93.796 -8.908 -6.325 1.00 31.14 O
ATOM 4 OP2 A A1911 -96.242 -8.926 -7.041 1.00 31.14 O
ATOM 5 O5' A A1911 -94.897 -6.831 -7.176 1.00 31.13 O
ATOM 6 C5' A A1911 -93.714 -6.074 -7.385 1.00 31.13 C
ATOM 7 C4' A A1911 -93.982 -4.607 -7.217 1.00 31.13 C
ATOM 8 O4' A A1911 -95.048 -4.223 -8.124 1.00 31.13 O
ATOM 9 C3' A A1911 -94.443 -4.204 -5.830 1.00 31.14 C
ATOM 10 O3' A A1911 -93.916 -2.927 -5.511 1.00 31.14 O
ATOM 11 C2' A A1911 -95.959 -4.124 -5.973 1.00 31.14 C
ATOM 12 O2' A A1911 -96.579 -3.244 -5.073 1.00 31.13 O
ATOM 13 C1' A A1911 -96.115 -3.650 -7.403 1.00 31.14 C
ATOM 14 N9 A A1911 -97.369 -4.056 -8.037 1.00 31.95 N
ATOM 15 C8 A A1911 -97.713 -5.286 -8.508 1.00 31.95 C
ATOM 16 N7 A A1911 -98.908 -5.329 -9.053 1.00 31.95 N
ATOM 17 C5 A A1911 -99.393 -4.041 -8.939 1.00 31.95 C
ATOM 18 C6 A A1911 -100.611 -3.431 -9.321 1.00 31.95 C
ATOM 19 N6 A A1911 -101.636 -4.038 -9.923 1.00 31.95 N
ATOM 20 N1 A A1911 -100.761 -2.120 -9.070 1.00 31.95 N
ATOM 21 C2 A A1911 -99.753 -1.479 -8.463 1.00 31.95 C
ATOM 22 N3 A A1911 -98.572 -1.949 -8.055 1.00 31.95 N
ATOM 23 C4 A A1911 -98.445 -3.254 -8.323 1.00 31.95 C
ATOM 24 P A A1912 -92.596 -2.812 -4.603 1.00 23.80 P
ATOM 25 OP1 A A1912 -91.434 -3.220 -5.448 1.00 23.80 O
ATOM 26 OP2 A A1912 -92.872 -3.558 -3.348 1.00 23.80 O
ATOM 27 O5' A A1912 -92.522 -1.247 -4.291 1.00 23.80 O
TER
ATOM 1 O3' A B1911 -93.916 -2.927 -5.511 1.00 31.14 O
ATOM 2 P A B1912 -92.596 -2.812 -4.603 1.00 23.80 P
ATOM 3 OP1 A B1912 -91.434 -3.220 -5.448 1.00 23.80 O
ATOM 4 OP2 A B1912 -92.872 -3.558 -3.348 1.00 23.80 O
ATOM 5 O5' A B1912 -92.522 -1.247 -4.291 1.00 23.80 O
ATOM 6 C5' A B1912 -91.306 -0.622 -3.878 1.00 23.80 C
ATOM 7 C4' A B1912 -91.191 0.775 -4.441 1.00 23.80 C
ATOM 8 O4' A B1912 -91.456 0.723 -5.869 1.00 23.80 O
ATOM 9 C3' A B1912 -92.191 1.809 -3.915 1.00 23.80 C
ATOM 10 O3' A B1912 -91.774 2.445 -2.721 1.00 23.80 O
ATOM 11 C2' A B1912 -92.298 2.763 -5.091 1.00 23.80 C
ATOM 12 O2' A B1912 -91.130 3.567 -5.199 1.00 23.80 O
ATOM 13 C1' A B1912 -92.297 1.787 -6.248 1.00 23.80 C
ATOM 14 N9 A B1912 -93.641 1.250 -6.494 1.00 23.52 N
ATOM 15 C8 A B1912 -94.017 -0.045 -6.750 1.00 23.52 C
ATOM 16 N7 A B1912 -95.311 -0.190 -6.886 1.00 23.52 N
ATOM 17 C5 A B1912 -95.807 1.094 -6.697 1.00 23.52 C
ATOM 18 C6 A B1912 -97.106 1.616 -6.712 1.00 23.52 C
ATOM 19 N6 A B1912 -98.209 0.886 -6.937 1.00 23.52 N
ATOM 20 N1 A B1912 -97.222 2.941 -6.486 1.00 23.52 N
ATOM 21 C2 A B1912 -96.132 3.675 -6.273 1.00 23.52 C
ATOM 22 N3 A B1912 -94.870 3.294 -6.244 1.00 23.52 N
ATOM 23 C4 A B1912 -94.782 1.986 -6.457 1.00 23.52 C
ATOM 24 P C B1913 -92.289 1.931 -1.293 1.00 19.37 P
ATOM 25 OP1 C B1913 -91.485 2.625 -0.268 1.00 19.37 O
ATOM 26 OP2 C B1913 -92.276 0.452 -1.315 1.00 19.37 O
ATOM 27 O5' C B1913 -93.782 2.437 -1.245 1.00 19.37 O
TER
ATOM 2 P A A1911 -94.870 -8.410 -7.211 1.00 31.13 P
ATOM 3 OP1 A A1911 -93.796 -8.908 -6.325 1.00 31.14 O
ATOM 4 OP2 A A1911 -96.242 -8.926 -7.041 1.00 31.14 O
ATOM 5 O5' A A1911 -94.897 -6.831 -7.176 1.00 31.13 O
ATOM 6 C5' A A1911 -93.714 -6.074 -7.385 1.00 31.13 C
ATOM 7 C4' A A1911 -93.982 -4.607 -7.217 1.00 31.13 C
ATOM 8 O4' A A1911 -95.048 -4.223 -8.124 1.00 31.13 O
ATOM 9 C3' A A1911 -94.443 -4.204 -5.830 1.00 31.14 C
ATOM 10 O3' A A1911 -93.916 -2.927 -5.511 1.00 31.14 O
ATOM 11 C2' A A1911 -95.959 -4.124 -5.973 1.00 31.14 C
ATOM 12 O2' A A1911 -96.579 -3.244 -5.073 1.00 31.13 O
ATOM 13 C1' A A1911 -96.115 -3.650 -7.403 1.00 31.14 C
ATOM 14 N9 A A1911 -97.369 -4.056 -8.037 1.00 31.95 N
ATOM 15 C8 A A1911 -97.713 -5.286 -8.508 1.00 31.95 C
ATOM 16 N7 A A1911 -98.908 -5.329 -9.053 1.00 31.95 N
ATOM 17 C5 A A1911 -99.393 -4.041 -8.939 1.00 31.95 C
ATOM 18 C6 A A1911 -100.611 -3.431 -9.321 1.00 31.95 C
ATOM 19 N6 A A1911 -101.636 -4.038 -9.923 1.00 31.95 N
ATOM 20 N1 A A1911 -100.761 -2.120 -9.070 1.00 31.95 N
ATOM 21 C2 A A1911 -99.753 -1.479 -8.463 1.00 31.95 C
ATOM 22 N3 A A1911 -98.572 -1.949 -8.055 1.00 31.95 N
ATOM 23 C4 A A1911 -98.445 -3.254 -8.323 1.00 31.95 C
ATOM 24 P A A1912 -92.596 -2.812 -4.603 1.00 23.80 P
ATOM 25 OP1 A A1912 -91.434 -3.220 -5.448 1.00 23.80 O
ATOM 26 OP2 A A1912 -92.872 -3.558 -3.348 1.00 23.80 O
ATOM 27 O5' A A1912 -92.522 -1.247 -4.291 1.00 23.80 O
TER
ATOM 1 O3' A B1911 -93.916 -2.927 -5.511 1.00 31.14 O
ATOM 2 P A B1912 -92.596 -2.812 -4.603 1.00 23.80 P
ATOM 3 OP1 A B1912 -91.434 -3.220 -5.448 1.00 23.80 O
ATOM 4 OP2 A B1912 -92.872 -3.558 -3.348 1.00 23.80 O
ATOM 5 O5' A B1912 -92.522 -1.247 -4.291 1.00 23.80 O
ATOM 6 C5' A B1912 -91.306 -0.622 -3.878 1.00 23.80 C
ATOM 7 C4' A B1912 -91.191 0.775 -4.441 1.00 23.80 C
ATOM 8 O4' A B1912 -91.456 0.723 -5.869 1.00 23.80 O
ATOM 9 C3' A B1912 -92.191 1.809 -3.915 1.00 23.80 C
ATOM 10 O3' A B1912 -91.774 2.445 -2.721 1.00 23.80 O
ATOM 11 C2' A B1912 -92.298 2.763 -5.091 1.00 23.80 C
ATOM 12 O2' A B1912 -91.130 3.567 -5.199 1.00 23.80 O
ATOM 13 C1' A B1912 -92.297 1.787 -6.248 1.00 23.80 C
ATOM 14 N9 A B1912 -93.641 1.250 -6.494 1.00 23.52 N
ATOM 15 C8 A B1912 -94.017 -0.045 -6.750 1.00 23.52 C
ATOM 16 N7 A B1912 -95.311 -0.190 -6.886 1.00 23.52 N
ATOM 17 C5 A B1912 -95.807 1.094 -6.697 1.00 23.52 C
ATOM 18 C6 A B1912 -97.106 1.616 -6.712 1.00 23.52 C
ATOM 19 N6 A B1912 -98.209 0.886 -6.937 1.00 23.52 N
ATOM 20 N1 A B1912 -97.222 2.941 -6.486 1.00 23.52 N
ATOM 21 C2 A B1912 -96.132 3.675 -6.273 1.00 23.52 C
ATOM 22 N3 A B1912 -94.870 3.294 -6.244 1.00 23.52 N
ATOM 23 C4 A B1912 -94.782 1.986 -6.457 1.00 23.52 C
ATOM 24 P C B1913 -92.289 1.931 -1.293 1.00 19.37 P
ATOM 25 OP1 C B1913 -91.485 2.625 -0.268 1.00 19.37 O
ATOM 26 OP2 C B1913 -92.276 0.452 -1.315 1.00 19.37 O
ATOM 27 O5' C B1913 -93.782 2.437 -1.245 1.00 19.37 O
TER
Atoms:
OP1: (-93.796,-8.908,-6.325)
OP2: (-96.242,-8.926,-7.041)
C3': (-94.443,-4.204,-5.830)
C1': (-96.115,-3.650,-7.403)
C5': (-93.714,-6.074,-7.385)
O4': (-95.048,-4.223,-8.124)
C8: (-97.713,-5.286,-8.508)
O2': (-96.579,-3.244,-5.073)
C6: (-100.611,-3.431,-9.321)
C5: (-99.393,-4.041,-8.939)
C4: (-98.445,-3.254,-8.323)
P: (-94.870,-8.410,-7.211)
C4': (-93.982,-4.607,-7.217)
C2': (-95.959,-4.124,-5.973)
C2: (-99.753,-1.479,-8.463)
N1: (-100.761,-2.120,-9.070)
N3: (-98.572,-1.949,-8.055)
N6: (-101.636,-4.038,-9.923)
N7: (-98.908,-5.329,-9.053)
N9: (-97.369,-4.056,-8.037)
O5': (-94.897,-6.831,-7.176)
O3': (-93.916,-2.927,-5.511)
OP2: (-96.242,-8.926,-7.041)
C3': (-94.443,-4.204,-5.830)
C1': (-96.115,-3.650,-7.403)
C5': (-93.714,-6.074,-7.385)
O4': (-95.048,-4.223,-8.124)
C8: (-97.713,-5.286,-8.508)
O2': (-96.579,-3.244,-5.073)
C6: (-100.611,-3.431,-9.321)
C5: (-99.393,-4.041,-8.939)
C4: (-98.445,-3.254,-8.323)
P: (-94.870,-8.410,-7.211)
C4': (-93.982,-4.607,-7.217)
C2': (-95.959,-4.124,-5.973)
C2: (-99.753,-1.479,-8.463)
N1: (-100.761,-2.120,-9.070)
N3: (-98.572,-1.949,-8.055)
N6: (-101.636,-4.038,-9.923)
N7: (-98.908,-5.329,-9.053)
N9: (-97.369,-4.056,-8.037)
O5': (-94.897,-6.831,-7.176)
O3': (-93.916,-2.927,-5.511)
OP1: (-91.434,-3.220,-5.448)
OP2: (-92.872,-3.558,-3.348)
C3': (-92.191,1.809,-3.915)
C1': (-92.297,1.787,-6.248)
C5': (-91.306,-0.622,-3.878)
O4': (-91.456,0.723,-5.869)
C8: (-94.017,-0.045,-6.750)
O2': (-91.130,3.567,-5.199)
C6: (-97.106,1.616,-6.712)
C5: (-95.807,1.094,-6.697)
C4: (-94.782,1.986,-6.457)
P: (-92.596,-2.812,-4.603)
C4': (-91.191,0.775,-4.441)
C2': (-92.298,2.763,-5.091)
C2: (-96.132,3.675,-6.273)
N1: (-97.222,2.941,-6.486)
N3: (-94.870,3.294,-6.244)
N6: (-98.209,0.886,-6.937)
N7: (-95.311,-0.190,-6.886)
N9: (-93.641,1.250,-6.494)
O5': (-92.522,-1.247,-4.291)
O3': (-91.774,2.445,-2.721)
OP2: (-92.872,-3.558,-3.348)
C3': (-92.191,1.809,-3.915)
C1': (-92.297,1.787,-6.248)
C5': (-91.306,-0.622,-3.878)
O4': (-91.456,0.723,-5.869)
C8: (-94.017,-0.045,-6.750)
O2': (-91.130,3.567,-5.199)
C6: (-97.106,1.616,-6.712)
C5: (-95.807,1.094,-6.697)
C4: (-94.782,1.986,-6.457)
P: (-92.596,-2.812,-4.603)
C4': (-91.191,0.775,-4.441)
C2': (-92.298,2.763,-5.091)
C2: (-96.132,3.675,-6.273)
N1: (-97.222,2.941,-6.486)
N3: (-94.870,3.294,-6.244)
N6: (-98.209,0.886,-6.937)
N7: (-95.311,-0.190,-6.886)
N9: (-93.641,1.250,-6.494)
O5': (-92.522,-1.247,-4.291)
O3': (-91.774,2.445,-2.721)
Image (generated by PyMOL):