ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3R8S:A763:A1768

Extra

PDB:
ATOM 1 O3' G A 762 -40.674 -18.957 10.230 1.00 0.01 O
ATOM 2 P A A 763 -41.166 -18.310 11.597 1.00 0.01 P
ATOM 3 OP1 A A 763 -41.994 -17.152 11.230 1.00 0.01 O
ATOM 4 OP2 A A 763 -39.979 -18.105 12.440 1.00 0.01 O
ATOM 5 O5' A A 763 -42.064 -19.445 12.222 1.00 0.01 O
ATOM 6 C5' A A 763 -42.099 -19.622 13.620 1.00 0.01 C
ATOM 7 C4' A A 763 -42.977 -20.769 14.018 1.00 0.01 C
ATOM 8 O4' A A 763 -44.357 -20.422 13.781 1.00 0.01 O
ATOM 9 C3' A A 763 -42.725 -22.078 13.282 1.00 0.01 C
ATOM 10 O3' A A 763 -42.368 -23.089 14.203 1.00 0.01 O
ATOM 11 C2' A A 763 -44.063 -22.431 12.634 1.00 0.01 C
ATOM 12 O2' A A 763 -44.393 -23.807 12.725 1.00 0.01 O
ATOM 13 C1' A A 763 -45.060 -21.561 13.395 1.00 0.01 C
ATOM 14 N9 A A 763 -46.217 -21.159 12.602 1.00 0.01 N
ATOM 15 C8 A A 763 -46.248 -20.708 11.325 1.00 0.01 C
ATOM 16 N7 A A 763 -47.453 -20.503 10.851 1.00 0.01 N
ATOM 17 C5 A A 763 -48.285 -20.858 11.899 1.00 0.01 C
ATOM 18 C6 A A 763 -49.693 -20.875 12.063 1.00 0.01 C
ATOM 19 N6 A A 763 -50.576 -20.509 11.145 1.00 0.01 N
ATOM 20 N1 A A 763 -50.199 -21.273 13.224 1.00 0.01 N
ATOM 21 C2 A A 763 -49.322 -21.625 14.146 1.00 0.01 C
ATOM 22 N3 A A 763 -47.992 -21.661 14.118 1.00 0.01 N
ATOM 23 C4 A A 763 -47.520 -21.266 12.957 1.00 0.01 C
ATOM 24 P C A 764 -40.833 -23.494 14.344 1.00 0.01 P
ATOM 25 OP1 C A 764 -40.766 -24.656 15.259 1.00 0.01 O
ATOM 26 OP2 C A 764 -40.094 -22.269 14.695 1.00 0.01 O
ATOM 27 O5' C A 764 -40.444 -23.925 12.868 1.00 0.01 O
TER

ATOM 1 O3' C B1767 -50.209 -19.594 0.534 1.00 0.01 O
ATOM 2 P U B1768 -50.013 -21.061 1.112 1.00 0.01 P
ATOM 3 OP1 U B1768 -49.665 -21.954 -0.005 1.00 0.01 O
ATOM 4 OP2 U B1768 -51.211 -21.360 1.898 1.00 0.01 O
ATOM 5 O5' U B1768 -48.780 -20.884 2.086 1.00 0.01 O
ATOM 6 C5' U B1768 -47.496 -20.564 1.599 1.00 0.01 C
ATOM 7 C4' U B1768 -46.466 -20.609 2.692 1.00 0.01 C
ATOM 8 O4' U B1768 -46.708 -19.530 3.627 1.00 0.01 O
ATOM 9 C3' U B1768 -46.493 -21.832 3.581 1.00 0.01 C
ATOM 10 O3' U B1768 -45.959 -23.018 2.992 1.00 0.01 O
ATOM 11 C2' U B1768 -45.750 -21.330 4.817 1.00 0.01 C
ATOM 12 O2' U B1768 -44.354 -21.221 4.584 1.00 0.01 O
ATOM 13 C1' U B1768 -46.309 -19.926 4.924 1.00 0.01 C
ATOM 14 N1 U B1768 -47.459 -19.875 5.820 1.00 0.01 N
ATOM 15 C2 U B1768 -47.186 -19.992 7.156 1.00 0.01 C
ATOM 16 O2 U B1768 -46.060 -20.135 7.609 1.00 0.01 O
ATOM 17 N3 U B1768 -48.281 -19.937 7.961 1.00 0.01 N
ATOM 18 C4 U B1768 -49.579 -19.776 7.560 1.00 0.01 C
ATOM 19 O4 U B1768 -50.466 -19.745 8.406 1.00 0.01 O
ATOM 20 C5 U B1768 -49.768 -19.669 6.158 1.00 0.01 C
ATOM 21 C6 U B1768 -48.716 -19.727 5.360 1.00 0.01 C
ATOM 22 P G B1769 -46.491 -24.447 3.507 1.00 0.01 P
ATOM 23 OP1 G B1769 -45.983 -25.485 2.597 1.00 0.01 O
ATOM 24 OP2 G B1769 -47.941 -24.313 3.681 1.00 0.01 O
ATOM 25 O5' G B1769 -45.787 -24.587 4.931 1.00 0.01 O
TER

Atoms:
OP1: (-41.994,-17.152,11.230)
OP2: (-39.979,-18.105,12.440)
C3': (-42.725,-22.078,13.282)
C1': (-45.060,-21.561,13.395)
C5': (-42.099,-19.622,13.620)
O4': (-44.357,-20.422,13.781)
C8: (-46.248,-20.708,11.325)
O2': (-44.393,-23.807,12.725)
C6: (-49.693,-20.875,12.063)
C5: (-48.285,-20.858,11.899)
C4: (-47.520,-21.266,12.957)
P: (-41.166,-18.310,11.597)
C4': (-42.977,-20.769,14.018)
C2': (-44.063,-22.431,12.634)
C2: (-49.322,-21.625,14.146)
N1: (-50.199,-21.273,13.224)
N3: (-47.992,-21.661,14.118)
N6: (-50.576,-20.509,11.145)
N7: (-47.453,-20.503,10.851)
N9: (-46.217,-21.159,12.602)
O5': (-42.064,-19.445,12.222)
O3': (-42.368,-23.089,14.203)
C4: (-49.579,-19.776,7.560)
N3: (-48.281,-19.937,7.961)
OP1: (-49.665,-21.954,-0.005)
OP2: (-51.211,-21.360,1.898)
C2: (-47.186,-19.992,7.156)
C1': (-46.309,-19.926,4.924)
C3': (-46.493,-21.832,3.581)
O5': (-48.780,-20.884,2.086)
O4': (-46.708,-19.530,3.627)
C5': (-47.496,-20.564,1.599)
P: (-50.013,-21.061,1.112)
C4': (-46.466,-20.609,2.692)
C2': (-45.750,-21.330,4.817)
O2': (-44.354,-21.221,4.584)
N1: (-47.459,-19.875,5.820)
O4: (-50.466,-19.745,8.406)
O2: (-46.060,-20.135,7.609)
C6: (-48.716,-19.727,5.360)
C5: (-49.768,-19.669,6.158)
O3': (-45.959,-23.018,2.992)
Image (generated by PyMOL):
PyMOL image
show in jmol