ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQ8:01866:01889

Extra

PDB:
ATOM 1 O3' U A1865 108.517 85.811 60.381 1.00 64.17 O
ATOM 2 P G A1866 108.104 85.981 58.837 1.00 65.88 P
ATOM 3 OP1 G A1866 106.717 85.447 58.695 1.00 65.14 O
ATOM 4 OP2 G A1866 109.195 85.443 57.971 1.00 64.58 O
ATOM 5 O5' G A1866 108.060 87.560 58.630 1.00 64.44 O
ATOM 6 C5' G A1866 107.006 88.353 59.209 1.00 62.20 C
ATOM 7 C4' G A1866 107.173 89.799 58.817 1.00 59.99 C
ATOM 8 O4' G A1866 108.403 90.307 59.398 1.00 58.83 O
ATOM 9 C3' G A1866 107.352 90.042 57.327 1.00 59.26 C
ATOM 10 O3' G A1866 106.124 90.042 56.608 1.00 57.73 O
ATOM 11 C2' G A1866 108.061 91.388 57.307 1.00 58.91 C
ATOM 12 O2' G A1866 107.187 92.484 57.507 1.00 58.02 O
ATOM 13 C1' G A1866 109.005 91.234 58.505 1.00 58.27 C
ATOM 14 N9 G A1866 110.304 90.703 58.101 1.00 57.26 N
ATOM 15 C8 G A1866 110.662 89.380 57.982 1.00 55.76 C
ATOM 16 N7 G A1866 111.887 89.217 57.564 1.00 55.76 N
ATOM 17 C5 G A1866 112.371 90.508 57.403 1.00 55.47 C
ATOM 18 C6 G A1866 113.638 90.964 56.966 1.00 55.91 C
ATOM 19 O6 G A1866 114.618 90.297 56.607 1.00 57.53 O
ATOM 20 N1 G A1866 113.706 92.353 56.961 1.00 56.77 N
ATOM 21 C2 G A1866 112.685 93.199 57.321 1.00 56.10 C
ATOM 22 N2 G A1866 112.952 94.511 57.251 1.00 56.36 N
ATOM 23 N3 G A1866 111.496 92.788 57.721 1.00 55.19 N
ATOM 24 C4 G A1866 111.410 91.438 57.740 1.00 56.16 C
ATOM 25 P A A1867 105.952 89.073 55.333 1.00 57.27 P
ATOM 26 OP1 A A1867 105.126 87.914 55.784 1.00 56.18 O
ATOM 27 OP2 A A1867 107.289 88.836 54.725 1.00 56.32 O
ATOM 28 O5' A A1867 105.095 89.933 54.298 1.00 56.60 O
TER

ATOM 1 O3' A B1888 115.600 98.445 55.551 1.00 51.81 O
ATOM 2 P A B1889 115.767 98.331 57.141 1.00 52.76 P
ATOM 3 OP1 A B1889 117.066 98.962 57.498 1.00 52.94 O
ATOM 4 OP2 A B1889 115.482 96.935 57.567 1.00 54.12 O
ATOM 5 O5' A B1889 114.595 99.241 57.712 1.00 53.61 O
ATOM 6 C5' A B1889 114.550 100.651 57.431 1.00 52.22 C
ATOM 7 C4' A B1889 113.180 101.189 57.747 1.00 52.24 C
ATOM 8 O4' A B1889 112.211 100.548 56.873 1.00 52.02 O
ATOM 9 C3' A B1889 112.675 100.865 59.145 1.00 51.94 C
ATOM 10 O3' A B1889 113.184 101.759 60.129 1.00 52.42 O
ATOM 11 C2' A B1889 111.169 100.972 58.963 1.00 51.56 C
ATOM 12 O2' A B1889 110.730 102.315 58.903 1.00 53.29 O
ATOM 13 C1' A B1889 111.000 100.329 57.583 1.00 51.84 C
ATOM 14 N9 A B1889 110.770 98.885 57.676 1.00 49.23 N
ATOM 15 C8 A B1889 111.707 97.877 57.700 1.00 48.96 C
ATOM 16 N7 A B1889 111.192 96.677 57.832 1.00 46.90 N
ATOM 17 C5 A B1889 109.825 96.907 57.892 1.00 46.98 C
ATOM 18 C6 A B1889 108.729 96.041 58.036 1.00 45.06 C
ATOM 19 N6 A B1889 108.843 94.718 58.154 1.00 45.57 N
ATOM 20 N1 A B1889 107.494 96.587 58.053 1.00 44.48 N
ATOM 21 C2 A B1889 107.380 97.919 57.936 1.00 45.18 C
ATOM 22 N3 A B1889 108.333 98.839 57.798 1.00 45.72 N
ATOM 23 C4 A B1889 109.548 98.262 57.785 1.00 47.94 C
ATOM 24 P G B1890 113.494 101.217 61.614 1.00 52.51 P
ATOM 25 OP1 G B1890 113.632 102.420 62.481 1.00 52.20 O
ATOM 26 OP2 G B1890 114.602 100.219 61.558 1.00 53.19 O
ATOM 27 O5' G B1890 112.153 100.463 62.033 1.00 52.73 O
TER

Atoms:
OP1: (106.717,85.447,58.695)
OP2: (109.195,85.443,57.971)
C3': (107.352,90.042,57.327)
C1': (109.005,91.234,58.505)
C5': (107.006,88.353,59.209)
O6: (114.618,90.297,56.607)
O4': (108.403,90.307,59.398)
C8: (110.662,89.380,57.982)
C2: (112.685,93.199,57.321)
C6: (113.638,90.964,56.966)
C5: (112.371,90.508,57.403)
C4: (111.410,91.438,57.740)
P: (108.104,85.981,58.837)
C4': (107.173,89.799,58.817)
C2': (108.061,91.388,57.307)
O2': (107.187,92.484,57.507)
N1: (113.706,92.353,56.961)
N2: (112.952,94.511,57.251)
N3: (111.496,92.788,57.721)
N7: (111.887,89.217,57.564)
N9: (110.304,90.703,58.101)
O5': (108.060,87.560,58.630)
O3': (106.124,90.042,56.608)
OP1: (117.066,98.962,57.498)
OP2: (115.482,96.935,57.567)
C3': (112.675,100.865,59.145)
C1': (111.000,100.329,57.583)
C5': (114.550,100.651,57.431)
O4': (112.211,100.548,56.873)
C8: (111.707,97.877,57.700)
O2': (110.730,102.315,58.903)
C6: (108.729,96.041,58.036)
C5: (109.825,96.907,57.892)
C4: (109.548,98.262,57.785)
P: (115.767,98.331,57.141)
C4': (113.180,101.189,57.747)
C2': (111.169,100.972,58.963)
C2: (107.380,97.919,57.936)
N1: (107.494,96.587,58.053)
N3: (108.333,98.839,57.798)
N6: (108.843,94.718,58.154)
N7: (111.192,96.677,57.832)
N9: (110.770,98.885,57.676)
O5': (114.595,99.241,57.712)
O3': (113.184,101.759,60.129)
Image (generated by PyMOL):
PyMOL image
show in jmol