Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OHJ:A109:A46
Extra
PDB:
ATOM 1 O3' C A 108 32.810 -51.228 -50.116 1.00 35.94 O
ATOM 2 P G A 109 33.759 -50.280 -51.006 1.00 41.77 P
ATOM 3 OP1 G A 109 34.335 -49.252 -50.074 1.00 32.78 O
ATOM 4 OP2 G A 109 32.959 -49.824 -52.161 1.00 38.05 O
ATOM 5 O5' G A 109 34.912 -51.264 -51.508 1.00 33.94 O
ATOM 6 C5' G A 109 36.245 -51.096 -51.040 1.00 32.08 C
ATOM 7 C4' G A 109 37.175 -52.147 -51.586 1.00 33.25 C
ATOM 8 O4' G A 109 36.470 -53.390 -51.773 1.00 35.93 O
ATOM 9 C3' G A 109 37.778 -51.854 -52.935 1.00 30.91 C
ATOM 10 O3' G A 109 38.893 -51.006 -52.836 1.00 31.91 O
ATOM 11 C2' G A 109 38.124 -53.237 -53.456 1.00 36.22 C
ATOM 12 O2' G A 109 39.339 -53.691 -52.874 1.00 36.58 O
ATOM 13 C1' G A 109 36.980 -54.066 -52.896 1.00 34.32 C
ATOM 14 N9 G A 109 35.878 -54.227 -53.850 1.00 43.87 N
ATOM 15 C8 G A 109 34.739 -53.449 -53.836 1.00 43.17 C
ATOM 16 N7 G A 109 33.862 -53.794 -54.737 1.00 42.64 N
ATOM 17 C5 G A 109 34.445 -54.878 -55.346 1.00 35.73 C
ATOM 18 C6 G A 109 33.947 -55.636 -56.397 1.00 36.12 C
ATOM 19 O6 G A 109 32.881 -55.481 -56.964 1.00 46.33 O
ATOM 20 N1 G A 109 34.817 -56.638 -56.777 1.00 40.04 N
ATOM 21 C2 G A 109 36.025 -56.874 -56.184 1.00 40.17 C
ATOM 22 N2 G A 109 36.683 -57.905 -56.720 1.00 41.29 N
ATOM 23 N3 G A 109 36.539 -56.159 -55.184 1.00 38.76 N
ATOM 24 C4 G A 109 35.686 -55.180 -54.820 1.00 42.26 C
ATOM 25 P A A 110 38.702 -49.427 -52.963 1.00 43.26 P
ATOM 26 OP1 A A 110 39.530 -48.798 -51.904 1.00 33.35 O
ATOM 27 OP2 A A 110 37.219 -49.158 -52.989 1.00 29.71 O
ATOM 28 O5' A A 110 39.337 -49.126 -54.379 1.00 31.95 O
TER
ATOM 1 O3' A B 45 38.839 -61.418 -61.186 1.00 32.09 O
ATOM 2 P A B 46 38.745 -62.444 -59.962 1.00 44.34 P
ATOM 3 OP1 A B 46 38.760 -63.813 -60.535 1.00 44.77 O
ATOM 4 OP2 A B 46 37.597 -62.024 -59.113 1.00 38.49 O
ATOM 5 O5' A B 46 40.098 -62.186 -59.207 1.00 40.10 O
ATOM 6 C5' A B 46 41.301 -62.048 -59.918 1.00 31.92 C
ATOM 7 C4' A B 46 42.365 -61.568 -59.008 1.00 29.85 C
ATOM 8 O4' A B 46 42.248 -60.141 -58.840 1.00 38.66 O
ATOM 9 C3' A B 46 42.268 -62.104 -57.606 1.00 27.53 C
ATOM 10 O3' A B 46 42.754 -63.419 -57.509 1.00 34.50 O
ATOM 11 C2' A B 46 43.042 -61.077 -56.800 1.00 31.98 C
ATOM 12 O2' A B 46 44.442 -61.292 -56.917 1.00 41.26 O
ATOM 13 C1' A B 46 42.691 -59.781 -57.549 1.00 42.86 C
ATOM 14 N9 A B 46 41.631 -58.994 -56.871 1.00 41.38 N
ATOM 15 C8 A B 46 40.302 -59.278 -56.794 1.00 42.18 C
ATOM 16 N7 A B 46 39.613 -58.413 -56.109 1.00 41.55 N
ATOM 17 C5 A B 46 40.538 -57.482 -55.692 1.00 42.18 C
ATOM 18 C6 A B 46 40.404 -56.306 -54.916 1.00 46.73 C
ATOM 19 N6 A B 46 39.224 -55.872 -54.429 1.00 43.70 N
ATOM 20 N1 A B 46 41.522 -55.584 -54.675 1.00 34.76 N
ATOM 21 C2 A B 46 42.648 -56.065 -55.204 1.00 39.81 C
ATOM 22 N3 A B 46 42.898 -57.144 -55.946 1.00 38.24 N
ATOM 23 C4 A B 46 41.779 -57.824 -56.163 1.00 38.15 C
ATOM 24 P G B 47 42.309 -64.357 -56.294 1.00 43.16 P
ATOM 25 OP1 G B 47 42.986 -65.669 -56.464 1.00 41.53 O
ATOM 26 OP2 G B 47 40.839 -64.330 -56.229 1.00 45.42 O
ATOM 27 O5' G B 47 42.927 -63.578 -55.063 1.00 38.61 O
TER
ATOM 2 P G A 109 33.759 -50.280 -51.006 1.00 41.77 P
ATOM 3 OP1 G A 109 34.335 -49.252 -50.074 1.00 32.78 O
ATOM 4 OP2 G A 109 32.959 -49.824 -52.161 1.00 38.05 O
ATOM 5 O5' G A 109 34.912 -51.264 -51.508 1.00 33.94 O
ATOM 6 C5' G A 109 36.245 -51.096 -51.040 1.00 32.08 C
ATOM 7 C4' G A 109 37.175 -52.147 -51.586 1.00 33.25 C
ATOM 8 O4' G A 109 36.470 -53.390 -51.773 1.00 35.93 O
ATOM 9 C3' G A 109 37.778 -51.854 -52.935 1.00 30.91 C
ATOM 10 O3' G A 109 38.893 -51.006 -52.836 1.00 31.91 O
ATOM 11 C2' G A 109 38.124 -53.237 -53.456 1.00 36.22 C
ATOM 12 O2' G A 109 39.339 -53.691 -52.874 1.00 36.58 O
ATOM 13 C1' G A 109 36.980 -54.066 -52.896 1.00 34.32 C
ATOM 14 N9 G A 109 35.878 -54.227 -53.850 1.00 43.87 N
ATOM 15 C8 G A 109 34.739 -53.449 -53.836 1.00 43.17 C
ATOM 16 N7 G A 109 33.862 -53.794 -54.737 1.00 42.64 N
ATOM 17 C5 G A 109 34.445 -54.878 -55.346 1.00 35.73 C
ATOM 18 C6 G A 109 33.947 -55.636 -56.397 1.00 36.12 C
ATOM 19 O6 G A 109 32.881 -55.481 -56.964 1.00 46.33 O
ATOM 20 N1 G A 109 34.817 -56.638 -56.777 1.00 40.04 N
ATOM 21 C2 G A 109 36.025 -56.874 -56.184 1.00 40.17 C
ATOM 22 N2 G A 109 36.683 -57.905 -56.720 1.00 41.29 N
ATOM 23 N3 G A 109 36.539 -56.159 -55.184 1.00 38.76 N
ATOM 24 C4 G A 109 35.686 -55.180 -54.820 1.00 42.26 C
ATOM 25 P A A 110 38.702 -49.427 -52.963 1.00 43.26 P
ATOM 26 OP1 A A 110 39.530 -48.798 -51.904 1.00 33.35 O
ATOM 27 OP2 A A 110 37.219 -49.158 -52.989 1.00 29.71 O
ATOM 28 O5' A A 110 39.337 -49.126 -54.379 1.00 31.95 O
TER
ATOM 1 O3' A B 45 38.839 -61.418 -61.186 1.00 32.09 O
ATOM 2 P A B 46 38.745 -62.444 -59.962 1.00 44.34 P
ATOM 3 OP1 A B 46 38.760 -63.813 -60.535 1.00 44.77 O
ATOM 4 OP2 A B 46 37.597 -62.024 -59.113 1.00 38.49 O
ATOM 5 O5' A B 46 40.098 -62.186 -59.207 1.00 40.10 O
ATOM 6 C5' A B 46 41.301 -62.048 -59.918 1.00 31.92 C
ATOM 7 C4' A B 46 42.365 -61.568 -59.008 1.00 29.85 C
ATOM 8 O4' A B 46 42.248 -60.141 -58.840 1.00 38.66 O
ATOM 9 C3' A B 46 42.268 -62.104 -57.606 1.00 27.53 C
ATOM 10 O3' A B 46 42.754 -63.419 -57.509 1.00 34.50 O
ATOM 11 C2' A B 46 43.042 -61.077 -56.800 1.00 31.98 C
ATOM 12 O2' A B 46 44.442 -61.292 -56.917 1.00 41.26 O
ATOM 13 C1' A B 46 42.691 -59.781 -57.549 1.00 42.86 C
ATOM 14 N9 A B 46 41.631 -58.994 -56.871 1.00 41.38 N
ATOM 15 C8 A B 46 40.302 -59.278 -56.794 1.00 42.18 C
ATOM 16 N7 A B 46 39.613 -58.413 -56.109 1.00 41.55 N
ATOM 17 C5 A B 46 40.538 -57.482 -55.692 1.00 42.18 C
ATOM 18 C6 A B 46 40.404 -56.306 -54.916 1.00 46.73 C
ATOM 19 N6 A B 46 39.224 -55.872 -54.429 1.00 43.70 N
ATOM 20 N1 A B 46 41.522 -55.584 -54.675 1.00 34.76 N
ATOM 21 C2 A B 46 42.648 -56.065 -55.204 1.00 39.81 C
ATOM 22 N3 A B 46 42.898 -57.144 -55.946 1.00 38.24 N
ATOM 23 C4 A B 46 41.779 -57.824 -56.163 1.00 38.15 C
ATOM 24 P G B 47 42.309 -64.357 -56.294 1.00 43.16 P
ATOM 25 OP1 G B 47 42.986 -65.669 -56.464 1.00 41.53 O
ATOM 26 OP2 G B 47 40.839 -64.330 -56.229 1.00 45.42 O
ATOM 27 O5' G B 47 42.927 -63.578 -55.063 1.00 38.61 O
TER
Atoms:
OP1: (34.335,-49.252,-50.074)
OP2: (32.959,-49.824,-52.161)
C3': (37.778,-51.854,-52.935)
C1': (36.980,-54.066,-52.896)
C5': (36.245,-51.096,-51.040)
O6: (32.881,-55.481,-56.964)
O4': (36.470,-53.390,-51.773)
C8: (34.739,-53.449,-53.836)
C2: (36.025,-56.874,-56.184)
C6: (33.947,-55.636,-56.397)
C5: (34.445,-54.878,-55.346)
C4: (35.686,-55.180,-54.820)
P: (33.759,-50.280,-51.006)
C4': (37.175,-52.147,-51.586)
C2': (38.124,-53.237,-53.456)
O2': (39.339,-53.691,-52.874)
N1: (34.817,-56.638,-56.777)
N2: (36.683,-57.905,-56.720)
N3: (36.539,-56.159,-55.184)
N7: (33.862,-53.794,-54.737)
N9: (35.878,-54.227,-53.850)
O5': (34.912,-51.264,-51.508)
O3': (38.893,-51.006,-52.836)
OP2: (32.959,-49.824,-52.161)
C3': (37.778,-51.854,-52.935)
C1': (36.980,-54.066,-52.896)
C5': (36.245,-51.096,-51.040)
O6: (32.881,-55.481,-56.964)
O4': (36.470,-53.390,-51.773)
C8: (34.739,-53.449,-53.836)
C2: (36.025,-56.874,-56.184)
C6: (33.947,-55.636,-56.397)
C5: (34.445,-54.878,-55.346)
C4: (35.686,-55.180,-54.820)
P: (33.759,-50.280,-51.006)
C4': (37.175,-52.147,-51.586)
C2': (38.124,-53.237,-53.456)
O2': (39.339,-53.691,-52.874)
N1: (34.817,-56.638,-56.777)
N2: (36.683,-57.905,-56.720)
N3: (36.539,-56.159,-55.184)
N7: (33.862,-53.794,-54.737)
N9: (35.878,-54.227,-53.850)
O5': (34.912,-51.264,-51.508)
O3': (38.893,-51.006,-52.836)
OP1: (38.760,-63.813,-60.535)
OP2: (37.597,-62.024,-59.113)
C3': (42.268,-62.104,-57.606)
C1': (42.691,-59.781,-57.549)
C5': (41.301,-62.048,-59.918)
O4': (42.248,-60.141,-58.840)
C8: (40.302,-59.278,-56.794)
O2': (44.442,-61.292,-56.917)
C6: (40.404,-56.306,-54.916)
C5: (40.538,-57.482,-55.692)
C4: (41.779,-57.824,-56.163)
P: (38.745,-62.444,-59.962)
C4': (42.365,-61.568,-59.008)
C2': (43.042,-61.077,-56.800)
C2: (42.648,-56.065,-55.204)
N1: (41.522,-55.584,-54.675)
N3: (42.898,-57.144,-55.946)
N6: (39.224,-55.872,-54.429)
N7: (39.613,-58.413,-56.109)
N9: (41.631,-58.994,-56.871)
O5': (40.098,-62.186,-59.207)
O3': (42.754,-63.419,-57.509)
OP2: (37.597,-62.024,-59.113)
C3': (42.268,-62.104,-57.606)
C1': (42.691,-59.781,-57.549)
C5': (41.301,-62.048,-59.918)
O4': (42.248,-60.141,-58.840)
C8: (40.302,-59.278,-56.794)
O2': (44.442,-61.292,-56.917)
C6: (40.404,-56.306,-54.916)
C5: (40.538,-57.482,-55.692)
C4: (41.779,-57.824,-56.163)
P: (38.745,-62.444,-59.962)
C4': (42.365,-61.568,-59.008)
C2': (43.042,-61.077,-56.800)
C2: (42.648,-56.065,-55.204)
N1: (41.522,-55.584,-54.675)
N3: (42.898,-57.144,-55.946)
N6: (39.224,-55.872,-54.429)
N7: (39.613,-58.413,-56.109)
N9: (41.631,-58.994,-56.871)
O5': (40.098,-62.186,-59.207)
O3': (42.754,-63.419,-57.509)
Image (generated by PyMOL):