ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1K9M:A87:A70

Extra

PDB:
ATOM 1 O3' A A 86 38.696 164.285 14.090 1.00 68.64 O
ATOM 2 P G A 87 38.300 162.718 13.917 1.00 66.69 P
ATOM 3 OP1 G A 87 39.523 161.885 14.052 1.00 66.49 O
ATOM 4 OP2 G A 87 37.434 162.551 12.728 1.00 66.97 O
ATOM 5 O5' G A 87 37.384 162.422 15.172 1.00 66.52 O
ATOM 6 C5' G A 87 37.869 162.607 16.506 1.00 64.72 C
ATOM 7 C4' G A 87 37.242 161.571 17.397 1.00 63.24 C
ATOM 8 O4' G A 87 35.795 161.686 17.259 1.00 63.63 O
ATOM 9 C3' G A 87 37.596 160.141 16.981 1.00 61.94 C
ATOM 10 O3' G A 87 37.606 159.274 18.114 1.00 59.53 O
ATOM 11 C2' G A 87 36.464 159.779 16.022 1.00 62.01 C
ATOM 12 O2' G A 87 36.248 158.386 15.924 1.00 58.91 O
ATOM 13 C1' G A 87 35.272 160.498 16.667 1.00 63.87 C
ATOM 14 N9 G A 87 34.205 160.874 15.731 1.00 66.17 N
ATOM 15 C8 G A 87 34.345 161.600 14.576 1.00 66.63 C
ATOM 16 N7 G A 87 33.222 161.769 13.934 1.00 67.16 N
ATOM 17 C5 G A 87 32.273 161.119 14.707 1.00 67.72 C
ATOM 18 C6 G A 87 30.855 160.957 14.505 1.00 68.35 C
ATOM 19 O6 G A 87 30.146 161.358 13.565 1.00 68.66 O
ATOM 20 N1 G A 87 30.271 160.242 15.542 1.00 67.90 N
ATOM 21 C2 G A 87 30.943 159.737 16.628 1.00 67.56 C
ATOM 22 N2 G A 87 30.188 159.093 17.534 1.00 66.41 N
ATOM 23 N3 G A 87 32.258 159.860 16.818 1.00 67.94 N
ATOM 24 C4 G A 87 32.854 160.564 15.827 1.00 67.30 C
ATOM 25 P A A 88 38.914 158.393 18.461 1.00 57.52 P
ATOM 26 OP1 A A 88 40.035 158.724 17.541 1.00 56.66 O
ATOM 27 OP2 A A 88 38.516 156.985 18.643 1.00 57.30 O
ATOM 28 O5' A A 88 39.313 158.927 19.899 1.00 57.03 O
TER

ATOM 1 O3' G B 69 28.123 154.141 22.033 1.00 48.56 O
ATOM 2 P A B 70 27.016 155.230 21.644 1.00 46.98 P
ATOM 3 OP1 A B 70 25.719 154.683 22.105 1.00 47.52 O
ATOM 4 OP2 A B 70 27.176 155.605 20.212 1.00 47.44 O
ATOM 5 O5' A B 70 27.400 156.480 22.563 1.00 47.67 O
ATOM 6 C5' A B 70 27.528 156.335 23.996 1.00 50.66 C
ATOM 7 C4' A B 70 28.011 157.624 24.643 1.00 53.03 C
ATOM 8 O4' A B 70 29.313 157.968 24.090 1.00 53.94 O
ATOM 9 C3' A B 70 27.124 158.860 24.466 1.00 53.20 C
ATOM 10 O3' A B 70 27.241 159.756 25.574 1.00 51.83 O
ATOM 11 C2' A B 70 27.789 159.564 23.291 1.00 55.12 C
ATOM 12 O2' A B 70 27.563 160.962 23.287 1.00 57.46 O
ATOM 13 C1' A B 70 29.262 159.278 23.573 1.00 55.62 C
ATOM 14 N9 A B 70 30.133 159.363 22.404 1.00 57.10 N
ATOM 15 C8 A B 70 29.977 158.853 21.139 1.00 57.47 C
ATOM 16 N7 A B 70 30.955 159.162 20.323 1.00 58.55 N
ATOM 17 C5 A B 70 31.817 159.915 21.109 1.00 58.44 C
ATOM 18 C6 A B 70 33.037 160.549 20.839 1.00 58.38 C
ATOM 19 N6 A B 70 33.646 160.503 19.658 1.00 57.11 N
ATOM 20 N1 A B 70 33.622 161.241 21.847 1.00 59.64 N
ATOM 21 C2 A B 70 33.015 161.278 23.041 1.00 60.16 C
ATOM 22 N3 A B 70 31.877 160.719 23.413 1.00 60.46 N
ATOM 23 C4 A B 70 31.322 160.043 22.390 1.00 58.74 C
ATOM 24 P G B 71 26.438 159.477 26.937 1.00 52.07 P
ATOM 25 OP1 G B 71 25.165 158.762 26.649 1.00 52.42 O
ATOM 26 OP2 G B 71 26.415 160.722 27.758 1.00 50.89 O
ATOM 27 O5' G B 71 27.388 158.443 27.672 1.00 50.81 O
TER

Atoms:
OP1: (39.523,161.885,14.052)
OP2: (37.434,162.551,12.728)
C3': (37.596,160.141,16.981)
C1': (35.272,160.498,16.667)
C5': (37.869,162.607,16.506)
O6: (30.146,161.358,13.565)
O4': (35.795,161.686,17.259)
C8: (34.345,161.600,14.576)
C2: (30.943,159.737,16.628)
C6: (30.855,160.957,14.505)
C5: (32.273,161.119,14.707)
C4: (32.854,160.564,15.827)
P: (38.300,162.718,13.917)
C4': (37.242,161.571,17.397)
C2': (36.464,159.779,16.022)
O2': (36.248,158.386,15.924)
N1: (30.271,160.242,15.542)
N2: (30.188,159.093,17.534)
N3: (32.258,159.860,16.818)
N7: (33.222,161.769,13.934)
N9: (34.205,160.874,15.731)
O5': (37.384,162.422,15.172)
O3': (37.606,159.274,18.114)
OP1: (25.719,154.683,22.105)
OP2: (27.176,155.605,20.212)
C3': (27.124,158.860,24.466)
C1': (29.262,159.278,23.573)
C5': (27.528,156.335,23.996)
O4': (29.313,157.968,24.090)
C8: (29.977,158.853,21.139)
O2': (27.563,160.962,23.287)
C6: (33.037,160.549,20.839)
C5: (31.817,159.915,21.109)
C4: (31.322,160.043,22.390)
P: (27.016,155.230,21.644)
C4': (28.011,157.624,24.643)
C2': (27.789,159.564,23.291)
C2: (33.015,161.278,23.041)
N1: (33.622,161.241,21.847)
N3: (31.877,160.719,23.413)
N6: (33.646,160.503,19.658)
N7: (30.955,159.162,20.323)
N9: (30.133,159.363,22.404)
O5': (27.400,156.480,22.563)
O3': (27.241,159.756,25.574)
Image (generated by PyMOL):
PyMOL image
show in jmol