Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A487:A491
Extra
PDB:
ATOM 1 O3' C A 486 -18.962-100.175 6.056 1.00 0.01 O
ATOM 2 P G A 487 -17.830 -99.074 5.984 1.00 0.01 P
ATOM 3 OP1 G A 487 -17.635 -98.754 4.552 1.00 0.01 O
ATOM 4 OP2 G A 487 -16.696 -99.582 6.781 1.00 0.01 O
ATOM 5 O5' G A 487 -18.498 -97.839 6.707 1.00 0.01 O
ATOM 6 C5' G A 487 -19.473 -97.071 6.028 1.00 0.01 C
ATOM 7 C4' G A 487 -20.173 -96.110 6.938 1.00 0.01 C
ATOM 8 O4' G A 487 -20.596 -96.777 8.149 1.00 0.01 O
ATOM 9 C3' G A 487 -19.349 -94.956 7.418 1.00 0.01 C
ATOM 10 O3' G A 487 -19.254 -93.948 6.442 1.00 0.01 O
ATOM 11 C2' G A 487 -20.091 -94.521 8.675 1.00 0.01 C
ATOM 12 O2' G A 487 -21.167 -93.670 8.339 1.00 0.01 O
ATOM 13 C1' G A 487 -20.656 -95.854 9.202 1.00 0.01 C
ATOM 14 N9 G A 487 -19.877 -96.392 10.329 1.00 0.01 N
ATOM 15 C8 G A 487 -18.909 -97.322 10.129 1.00 0.01 C
ATOM 16 N7 G A 487 -18.312 -97.683 11.230 1.00 0.01 N
ATOM 17 C5 G A 487 -18.932 -96.964 12.239 1.00 0.01 C
ATOM 18 C6 G A 487 -18.662 -96.955 13.643 1.00 0.01 C
ATOM 19 O6 G A 487 -17.831 -97.594 14.297 1.00 0.01 O
ATOM 20 N1 G A 487 -19.497 -96.082 14.322 1.00 0.01 N
ATOM 21 C2 G A 487 -20.467 -95.326 13.715 1.00 0.01 C
ATOM 22 N2 G A 487 -21.156 -94.560 14.576 1.00 0.01 N
ATOM 23 N3 G A 487 -20.714 -95.320 12.408 1.00 0.01 N
ATOM 24 C4 G A 487 -19.917 -96.159 11.705 1.00 0.01 C
ATOM 25 P G A 488 -17.823 -93.465 5.897 1.00 0.01 P
ATOM 26 OP1 G A 488 -18.061 -92.557 4.761 1.00 0.01 O
ATOM 27 OP2 G A 488 -16.996 -94.671 5.674 1.00 0.01 O
ATOM 28 O5' G A 488 -17.267 -92.642 7.106 1.00 0.01 O
TER
ATOM 1 O3' G B 490 -21.726 -90.402 16.431 1.00 0.01 O
ATOM 2 P A B 491 -22.594 -91.438 17.255 1.00 0.01 P
ATOM 3 OP1 A B 491 -22.587 -91.003 18.683 1.00 0.01 O
ATOM 4 OP2 A B 491 -22.100 -92.797 16.891 1.00 0.01 O
ATOM 5 O5' A B 491 -24.020 -91.201 16.657 1.00 0.01 O
ATOM 6 C5' A B 491 -24.591 -89.912 16.676 1.00 0.01 C
ATOM 7 C4' A B 491 -25.791 -89.859 15.799 1.00 0.01 C
ATOM 8 O4' A B 491 -25.367 -89.811 14.418 1.00 0.01 O
ATOM 9 C3' A B 491 -26.690 -91.067 15.881 1.00 0.01 C
ATOM 10 O3' A B 491 -27.587 -90.989 16.954 1.00 0.01 O
ATOM 11 C2' A B 491 -27.363 -91.067 14.534 1.00 0.01 C
ATOM 12 O2' A B 491 -28.413 -90.123 14.512 1.00 0.01 O
ATOM 13 C1' A B 491 -26.228 -90.581 13.625 1.00 0.01 C
ATOM 14 N9 A B 491 -25.454 -91.699 13.099 1.00 0.01 N
ATOM 15 C8 A B 491 -24.354 -92.215 13.715 1.00 0.01 C
ATOM 16 N7 A B 491 -23.833 -93.250 13.094 1.00 0.01 N
ATOM 17 C5 A B 491 -24.659 -93.413 12.020 1.00 0.01 C
ATOM 18 C6 A B 491 -24.614 -94.339 11.017 1.00 0.01 C
ATOM 19 N6 A B 491 -23.675 -95.254 10.974 1.00 0.01 N
ATOM 20 N1 A B 491 -25.540 -94.292 10.074 1.00 0.01 N
ATOM 21 C2 A B 491 -26.429 -93.321 10.192 1.00 0.01 C
ATOM 22 N3 A B 491 -26.580 -92.372 11.110 1.00 0.01 N
ATOM 23 C4 A B 491 -25.646 -92.475 12.009 1.00 0.01 C
ATOM 24 P G B 492 -27.896 -92.277 17.843 1.00 0.01 P
ATOM 25 OP1 G B 492 -29.105 -91.984 18.632 1.00 0.01 O
ATOM 26 OP2 G B 492 -26.658 -92.621 18.550 1.00 0.01 O
ATOM 27 O5' G B 492 -28.236 -93.367 16.764 1.00 0.01 O
TER
ATOM 2 P G A 487 -17.830 -99.074 5.984 1.00 0.01 P
ATOM 3 OP1 G A 487 -17.635 -98.754 4.552 1.00 0.01 O
ATOM 4 OP2 G A 487 -16.696 -99.582 6.781 1.00 0.01 O
ATOM 5 O5' G A 487 -18.498 -97.839 6.707 1.00 0.01 O
ATOM 6 C5' G A 487 -19.473 -97.071 6.028 1.00 0.01 C
ATOM 7 C4' G A 487 -20.173 -96.110 6.938 1.00 0.01 C
ATOM 8 O4' G A 487 -20.596 -96.777 8.149 1.00 0.01 O
ATOM 9 C3' G A 487 -19.349 -94.956 7.418 1.00 0.01 C
ATOM 10 O3' G A 487 -19.254 -93.948 6.442 1.00 0.01 O
ATOM 11 C2' G A 487 -20.091 -94.521 8.675 1.00 0.01 C
ATOM 12 O2' G A 487 -21.167 -93.670 8.339 1.00 0.01 O
ATOM 13 C1' G A 487 -20.656 -95.854 9.202 1.00 0.01 C
ATOM 14 N9 G A 487 -19.877 -96.392 10.329 1.00 0.01 N
ATOM 15 C8 G A 487 -18.909 -97.322 10.129 1.00 0.01 C
ATOM 16 N7 G A 487 -18.312 -97.683 11.230 1.00 0.01 N
ATOM 17 C5 G A 487 -18.932 -96.964 12.239 1.00 0.01 C
ATOM 18 C6 G A 487 -18.662 -96.955 13.643 1.00 0.01 C
ATOM 19 O6 G A 487 -17.831 -97.594 14.297 1.00 0.01 O
ATOM 20 N1 G A 487 -19.497 -96.082 14.322 1.00 0.01 N
ATOM 21 C2 G A 487 -20.467 -95.326 13.715 1.00 0.01 C
ATOM 22 N2 G A 487 -21.156 -94.560 14.576 1.00 0.01 N
ATOM 23 N3 G A 487 -20.714 -95.320 12.408 1.00 0.01 N
ATOM 24 C4 G A 487 -19.917 -96.159 11.705 1.00 0.01 C
ATOM 25 P G A 488 -17.823 -93.465 5.897 1.00 0.01 P
ATOM 26 OP1 G A 488 -18.061 -92.557 4.761 1.00 0.01 O
ATOM 27 OP2 G A 488 -16.996 -94.671 5.674 1.00 0.01 O
ATOM 28 O5' G A 488 -17.267 -92.642 7.106 1.00 0.01 O
TER
ATOM 1 O3' G B 490 -21.726 -90.402 16.431 1.00 0.01 O
ATOM 2 P A B 491 -22.594 -91.438 17.255 1.00 0.01 P
ATOM 3 OP1 A B 491 -22.587 -91.003 18.683 1.00 0.01 O
ATOM 4 OP2 A B 491 -22.100 -92.797 16.891 1.00 0.01 O
ATOM 5 O5' A B 491 -24.020 -91.201 16.657 1.00 0.01 O
ATOM 6 C5' A B 491 -24.591 -89.912 16.676 1.00 0.01 C
ATOM 7 C4' A B 491 -25.791 -89.859 15.799 1.00 0.01 C
ATOM 8 O4' A B 491 -25.367 -89.811 14.418 1.00 0.01 O
ATOM 9 C3' A B 491 -26.690 -91.067 15.881 1.00 0.01 C
ATOM 10 O3' A B 491 -27.587 -90.989 16.954 1.00 0.01 O
ATOM 11 C2' A B 491 -27.363 -91.067 14.534 1.00 0.01 C
ATOM 12 O2' A B 491 -28.413 -90.123 14.512 1.00 0.01 O
ATOM 13 C1' A B 491 -26.228 -90.581 13.625 1.00 0.01 C
ATOM 14 N9 A B 491 -25.454 -91.699 13.099 1.00 0.01 N
ATOM 15 C8 A B 491 -24.354 -92.215 13.715 1.00 0.01 C
ATOM 16 N7 A B 491 -23.833 -93.250 13.094 1.00 0.01 N
ATOM 17 C5 A B 491 -24.659 -93.413 12.020 1.00 0.01 C
ATOM 18 C6 A B 491 -24.614 -94.339 11.017 1.00 0.01 C
ATOM 19 N6 A B 491 -23.675 -95.254 10.974 1.00 0.01 N
ATOM 20 N1 A B 491 -25.540 -94.292 10.074 1.00 0.01 N
ATOM 21 C2 A B 491 -26.429 -93.321 10.192 1.00 0.01 C
ATOM 22 N3 A B 491 -26.580 -92.372 11.110 1.00 0.01 N
ATOM 23 C4 A B 491 -25.646 -92.475 12.009 1.00 0.01 C
ATOM 24 P G B 492 -27.896 -92.277 17.843 1.00 0.01 P
ATOM 25 OP1 G B 492 -29.105 -91.984 18.632 1.00 0.01 O
ATOM 26 OP2 G B 492 -26.658 -92.621 18.550 1.00 0.01 O
ATOM 27 O5' G B 492 -28.236 -93.367 16.764 1.00 0.01 O
TER
Atoms:
OP1: (-17.635,-98.754,4.552)
OP2: (-16.696,-99.582,6.781)
C3': (-19.349,-94.956,7.418)
C1': (-20.656,-95.854,9.202)
C5': (-19.473,-97.071,6.028)
O6: (-17.831,-97.594,14.297)
O4': (-20.596,-96.777,8.149)
C8: (-18.909,-97.322,10.129)
C2: (-20.467,-95.326,13.715)
C6: (-18.662,-96.955,13.643)
C5: (-18.932,-96.964,12.239)
C4: (-19.917,-96.159,11.705)
P: (-17.830,-99.074,5.984)
C4': (-20.173,-96.110,6.938)
C2': (-20.091,-94.521,8.675)
O2': (-21.167,-93.670,8.339)
N1: (-19.497,-96.082,14.322)
N2: (-21.156,-94.560,14.576)
N3: (-20.714,-95.320,12.408)
N7: (-18.312,-97.683,11.230)
N9: (-19.877,-96.392,10.329)
O5': (-18.498,-97.839,6.707)
O3': (-19.254,-93.948,6.442)
OP2: (-16.696,-99.582,6.781)
C3': (-19.349,-94.956,7.418)
C1': (-20.656,-95.854,9.202)
C5': (-19.473,-97.071,6.028)
O6: (-17.831,-97.594,14.297)
O4': (-20.596,-96.777,8.149)
C8: (-18.909,-97.322,10.129)
C2: (-20.467,-95.326,13.715)
C6: (-18.662,-96.955,13.643)
C5: (-18.932,-96.964,12.239)
C4: (-19.917,-96.159,11.705)
P: (-17.830,-99.074,5.984)
C4': (-20.173,-96.110,6.938)
C2': (-20.091,-94.521,8.675)
O2': (-21.167,-93.670,8.339)
N1: (-19.497,-96.082,14.322)
N2: (-21.156,-94.560,14.576)
N3: (-20.714,-95.320,12.408)
N7: (-18.312,-97.683,11.230)
N9: (-19.877,-96.392,10.329)
O5': (-18.498,-97.839,6.707)
O3': (-19.254,-93.948,6.442)
OP1: (-22.587,-91.003,18.683)
OP2: (-22.100,-92.797,16.891)
C3': (-26.690,-91.067,15.881)
C1': (-26.228,-90.581,13.625)
C5': (-24.591,-89.912,16.676)
O4': (-25.367,-89.811,14.418)
C8: (-24.354,-92.215,13.715)
O2': (-28.413,-90.123,14.512)
C6: (-24.614,-94.339,11.017)
C5: (-24.659,-93.413,12.020)
C4: (-25.646,-92.475,12.009)
P: (-22.594,-91.438,17.255)
C4': (-25.791,-89.859,15.799)
C2': (-27.363,-91.067,14.534)
C2: (-26.429,-93.321,10.192)
N1: (-25.540,-94.292,10.074)
N3: (-26.580,-92.372,11.110)
N6: (-23.675,-95.254,10.974)
N7: (-23.833,-93.250,13.094)
N9: (-25.454,-91.699,13.099)
O5': (-24.020,-91.201,16.657)
O3': (-27.587,-90.989,16.954)
OP2: (-22.100,-92.797,16.891)
C3': (-26.690,-91.067,15.881)
C1': (-26.228,-90.581,13.625)
C5': (-24.591,-89.912,16.676)
O4': (-25.367,-89.811,14.418)
C8: (-24.354,-92.215,13.715)
O2': (-28.413,-90.123,14.512)
C6: (-24.614,-94.339,11.017)
C5: (-24.659,-93.413,12.020)
C4: (-25.646,-92.475,12.009)
P: (-22.594,-91.438,17.255)
C4': (-25.791,-89.859,15.799)
C2': (-27.363,-91.067,14.534)
C2: (-26.429,-93.321,10.192)
N1: (-25.540,-94.292,10.074)
N3: (-26.580,-92.372,11.110)
N6: (-23.675,-95.254,10.974)
N7: (-23.833,-93.250,13.094)
N9: (-25.454,-91.699,13.099)
O5': (-24.020,-91.201,16.657)
O3': (-27.587,-90.989,16.954)
Image (generated by PyMOL):