Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3D2X:B70:B43
Extra
PDB:
ATOM 1 O3' G A 69 -12.087 -9.625 3.825 1.00 26.74 O
ATOM 2 P G A 70 -13.417 -8.747 4.025 1.00 26.94 P
ATOM 3 OP1 G A 70 -14.470 -9.300 3.124 1.00 26.71 O
ATOM 4 OP2 G A 70 -13.035 -7.316 3.915 1.00 25.25 O
ATOM 5 O5' G A 70 -13.848 -9.046 5.527 1.00 26.48 O
ATOM 6 C5' G A 70 -14.259 -10.368 5.927 1.00 27.07 C
ATOM 7 C4' G A 70 -14.473 -10.419 7.422 1.00 27.24 C
ATOM 8 O4' G A 70 -13.218 -10.169 8.104 1.00 26.80 O
ATOM 9 C3' G A 70 -15.433 -9.378 7.974 1.00 27.49 C
ATOM 10 O3' G A 70 -16.765 -9.852 7.923 1.00 29.42 O
ATOM 11 C2' G A 70 -14.969 -9.224 9.415 1.00 27.13 C
ATOM 12 O2' G A 70 -15.494 -10.233 10.257 1.00 27.62 O
ATOM 13 C1' G A 70 -13.457 -9.415 9.281 1.00 26.74 C
ATOM 14 N9 G A 70 -12.728 -8.153 9.174 1.00 25.38 N
ATOM 15 C8 G A 70 -12.338 -7.519 8.022 1.00 24.21 C
ATOM 16 N7 G A 70 -11.688 -6.412 8.244 1.00 25.24 N
ATOM 17 C5 G A 70 -11.651 -6.303 9.624 1.00 23.94 C
ATOM 18 C6 G A 70 -11.083 -5.306 10.444 1.00 24.79 C
ATOM 19 O6 G A 70 -10.468 -4.288 10.104 1.00 25.45 O
ATOM 20 N1 G A 70 -11.280 -5.580 11.790 1.00 24.00 N
ATOM 21 C2 G A 70 -11.938 -6.673 12.284 1.00 23.35 C
ATOM 22 N2 G A 70 -12.027 -6.754 13.619 1.00 22.11 N
ATOM 23 N3 G A 70 -12.469 -7.615 11.529 1.00 24.13 N
ATOM 24 C4 G A 70 -12.291 -7.366 10.215 1.00 24.55 C
ATOM 25 P A A 71 -17.772 -9.284 6.813 1.00 31.27 P
ATOM 26 OP1 A A 71 -18.151 -10.431 5.944 1.00 31.88 O
ATOM 27 OP2 A A 71 -17.157 -8.073 6.205 1.00 30.35 O
ATOM 28 O5' A A 71 -19.055 -8.856 7.655 1.00 32.65 O
TER
ATOM 1 O3' A B 42 -8.167 -6.538 19.865 1.00 24.23 O
ATOM 2 P A B 43 -9.142 -6.448 21.141 1.00 25.56 P
ATOM 3 OP1 A B 43 -9.894 -5.167 21.111 1.00 24.02 O
ATOM 4 OP2 A B 43 -8.332 -6.800 22.330 1.00 26.07 O
ATOM 5 O5' A B 43 -10.179 -7.632 20.917 1.00 25.17 O
ATOM 6 C5' A B 43 -11.163 -7.531 19.897 1.00 24.57 C
ATOM 7 C4' A B 43 -12.366 -8.359 20.244 1.00 24.29 C
ATOM 8 O4' A B 43 -13.441 -7.921 19.385 1.00 24.88 O
ATOM 9 C3' A B 43 -12.232 -9.855 20.005 1.00 24.20 C
ATOM 10 O3' A B 43 -11.743 -10.528 21.168 1.00 24.82 O
ATOM 11 C2' A B 43 -13.666 -10.263 19.680 1.00 24.45 C
ATOM 12 O2' A B 43 -14.458 -10.456 20.838 1.00 23.89 O
ATOM 13 C1' A B 43 -14.189 -9.028 18.940 1.00 23.72 C
ATOM 14 N9 A B 43 -14.062 -9.075 17.482 1.00 22.86 N
ATOM 15 C8 A B 43 -13.038 -8.561 16.722 1.00 22.12 C
ATOM 16 N7 A B 43 -13.189 -8.744 15.435 1.00 21.88 N
ATOM 17 C5 A B 43 -14.390 -9.428 15.334 1.00 21.61 C
ATOM 18 C6 A B 43 -15.106 -9.913 14.232 1.00 21.59 C
ATOM 19 N6 A B 43 -14.696 -9.784 12.970 1.00 21.94 N
ATOM 20 N1 A B 43 -16.277 -10.544 14.471 1.00 21.36 N
ATOM 21 C2 A B 43 -16.689 -10.671 15.734 1.00 21.82 C
ATOM 22 N3 A B 43 -16.107 -10.259 16.857 1.00 23.00 N
ATOM 23 C4 A B 43 -14.943 -9.637 16.586 1.00 23.12 C
ATOM 24 P C B 44 -10.836 -11.851 21.014 1.00 24.86 P
ATOM 25 OP1 C B 44 -10.983 -12.716 22.202 1.00 24.07 O
ATOM 26 OP2 C B 44 -9.473 -11.446 20.563 1.00 25.43 O
ATOM 27 O5' C B 44 -11.527 -12.628 19.826 1.00 23.82 O
TER
ATOM 2 P G A 70 -13.417 -8.747 4.025 1.00 26.94 P
ATOM 3 OP1 G A 70 -14.470 -9.300 3.124 1.00 26.71 O
ATOM 4 OP2 G A 70 -13.035 -7.316 3.915 1.00 25.25 O
ATOM 5 O5' G A 70 -13.848 -9.046 5.527 1.00 26.48 O
ATOM 6 C5' G A 70 -14.259 -10.368 5.927 1.00 27.07 C
ATOM 7 C4' G A 70 -14.473 -10.419 7.422 1.00 27.24 C
ATOM 8 O4' G A 70 -13.218 -10.169 8.104 1.00 26.80 O
ATOM 9 C3' G A 70 -15.433 -9.378 7.974 1.00 27.49 C
ATOM 10 O3' G A 70 -16.765 -9.852 7.923 1.00 29.42 O
ATOM 11 C2' G A 70 -14.969 -9.224 9.415 1.00 27.13 C
ATOM 12 O2' G A 70 -15.494 -10.233 10.257 1.00 27.62 O
ATOM 13 C1' G A 70 -13.457 -9.415 9.281 1.00 26.74 C
ATOM 14 N9 G A 70 -12.728 -8.153 9.174 1.00 25.38 N
ATOM 15 C8 G A 70 -12.338 -7.519 8.022 1.00 24.21 C
ATOM 16 N7 G A 70 -11.688 -6.412 8.244 1.00 25.24 N
ATOM 17 C5 G A 70 -11.651 -6.303 9.624 1.00 23.94 C
ATOM 18 C6 G A 70 -11.083 -5.306 10.444 1.00 24.79 C
ATOM 19 O6 G A 70 -10.468 -4.288 10.104 1.00 25.45 O
ATOM 20 N1 G A 70 -11.280 -5.580 11.790 1.00 24.00 N
ATOM 21 C2 G A 70 -11.938 -6.673 12.284 1.00 23.35 C
ATOM 22 N2 G A 70 -12.027 -6.754 13.619 1.00 22.11 N
ATOM 23 N3 G A 70 -12.469 -7.615 11.529 1.00 24.13 N
ATOM 24 C4 G A 70 -12.291 -7.366 10.215 1.00 24.55 C
ATOM 25 P A A 71 -17.772 -9.284 6.813 1.00 31.27 P
ATOM 26 OP1 A A 71 -18.151 -10.431 5.944 1.00 31.88 O
ATOM 27 OP2 A A 71 -17.157 -8.073 6.205 1.00 30.35 O
ATOM 28 O5' A A 71 -19.055 -8.856 7.655 1.00 32.65 O
TER
ATOM 1 O3' A B 42 -8.167 -6.538 19.865 1.00 24.23 O
ATOM 2 P A B 43 -9.142 -6.448 21.141 1.00 25.56 P
ATOM 3 OP1 A B 43 -9.894 -5.167 21.111 1.00 24.02 O
ATOM 4 OP2 A B 43 -8.332 -6.800 22.330 1.00 26.07 O
ATOM 5 O5' A B 43 -10.179 -7.632 20.917 1.00 25.17 O
ATOM 6 C5' A B 43 -11.163 -7.531 19.897 1.00 24.57 C
ATOM 7 C4' A B 43 -12.366 -8.359 20.244 1.00 24.29 C
ATOM 8 O4' A B 43 -13.441 -7.921 19.385 1.00 24.88 O
ATOM 9 C3' A B 43 -12.232 -9.855 20.005 1.00 24.20 C
ATOM 10 O3' A B 43 -11.743 -10.528 21.168 1.00 24.82 O
ATOM 11 C2' A B 43 -13.666 -10.263 19.680 1.00 24.45 C
ATOM 12 O2' A B 43 -14.458 -10.456 20.838 1.00 23.89 O
ATOM 13 C1' A B 43 -14.189 -9.028 18.940 1.00 23.72 C
ATOM 14 N9 A B 43 -14.062 -9.075 17.482 1.00 22.86 N
ATOM 15 C8 A B 43 -13.038 -8.561 16.722 1.00 22.12 C
ATOM 16 N7 A B 43 -13.189 -8.744 15.435 1.00 21.88 N
ATOM 17 C5 A B 43 -14.390 -9.428 15.334 1.00 21.61 C
ATOM 18 C6 A B 43 -15.106 -9.913 14.232 1.00 21.59 C
ATOM 19 N6 A B 43 -14.696 -9.784 12.970 1.00 21.94 N
ATOM 20 N1 A B 43 -16.277 -10.544 14.471 1.00 21.36 N
ATOM 21 C2 A B 43 -16.689 -10.671 15.734 1.00 21.82 C
ATOM 22 N3 A B 43 -16.107 -10.259 16.857 1.00 23.00 N
ATOM 23 C4 A B 43 -14.943 -9.637 16.586 1.00 23.12 C
ATOM 24 P C B 44 -10.836 -11.851 21.014 1.00 24.86 P
ATOM 25 OP1 C B 44 -10.983 -12.716 22.202 1.00 24.07 O
ATOM 26 OP2 C B 44 -9.473 -11.446 20.563 1.00 25.43 O
ATOM 27 O5' C B 44 -11.527 -12.628 19.826 1.00 23.82 O
TER
Atoms:
OP1: (-14.470,-9.300,3.124)
OP2: (-13.035,-7.316,3.915)
C3': (-15.433,-9.378,7.974)
C1': (-13.457,-9.415,9.281)
C5': (-14.259,-10.368,5.927)
O6: (-10.468,-4.288,10.104)
O4': (-13.218,-10.169,8.104)
C8: (-12.338,-7.519,8.022)
C2: (-11.938,-6.673,12.284)
C6: (-11.083,-5.306,10.444)
C5: (-11.651,-6.303,9.624)
C4: (-12.291,-7.366,10.215)
P: (-13.417,-8.747,4.025)
C4': (-14.473,-10.419,7.422)
C2': (-14.969,-9.224,9.415)
O2': (-15.494,-10.233,10.257)
N1: (-11.280,-5.580,11.790)
N2: (-12.027,-6.754,13.619)
N3: (-12.469,-7.615,11.529)
N7: (-11.688,-6.412,8.244)
N9: (-12.728,-8.153,9.174)
O5': (-13.848,-9.046,5.527)
O3': (-16.765,-9.852,7.923)
OP2: (-13.035,-7.316,3.915)
C3': (-15.433,-9.378,7.974)
C1': (-13.457,-9.415,9.281)
C5': (-14.259,-10.368,5.927)
O6: (-10.468,-4.288,10.104)
O4': (-13.218,-10.169,8.104)
C8: (-12.338,-7.519,8.022)
C2: (-11.938,-6.673,12.284)
C6: (-11.083,-5.306,10.444)
C5: (-11.651,-6.303,9.624)
C4: (-12.291,-7.366,10.215)
P: (-13.417,-8.747,4.025)
C4': (-14.473,-10.419,7.422)
C2': (-14.969,-9.224,9.415)
O2': (-15.494,-10.233,10.257)
N1: (-11.280,-5.580,11.790)
N2: (-12.027,-6.754,13.619)
N3: (-12.469,-7.615,11.529)
N7: (-11.688,-6.412,8.244)
N9: (-12.728,-8.153,9.174)
O5': (-13.848,-9.046,5.527)
O3': (-16.765,-9.852,7.923)
OP1: (-9.894,-5.167,21.111)
OP2: (-8.332,-6.800,22.330)
C3': (-12.232,-9.855,20.005)
C1': (-14.189,-9.028,18.940)
C5': (-11.163,-7.531,19.897)
O4': (-13.441,-7.921,19.385)
C8: (-13.038,-8.561,16.722)
O2': (-14.458,-10.456,20.838)
C6: (-15.106,-9.913,14.232)
C5: (-14.390,-9.428,15.334)
C4: (-14.943,-9.637,16.586)
P: (-9.142,-6.448,21.141)
C4': (-12.366,-8.359,20.244)
C2': (-13.666,-10.263,19.680)
C2: (-16.689,-10.671,15.734)
N1: (-16.277,-10.544,14.471)
N3: (-16.107,-10.259,16.857)
N6: (-14.696,-9.784,12.970)
N7: (-13.189,-8.744,15.435)
N9: (-14.062,-9.075,17.482)
O5': (-10.179,-7.632,20.917)
O3': (-11.743,-10.528,21.168)
OP2: (-8.332,-6.800,22.330)
C3': (-12.232,-9.855,20.005)
C1': (-14.189,-9.028,18.940)
C5': (-11.163,-7.531,19.897)
O4': (-13.441,-7.921,19.385)
C8: (-13.038,-8.561,16.722)
O2': (-14.458,-10.456,20.838)
C6: (-15.106,-9.913,14.232)
C5: (-14.390,-9.428,15.334)
C4: (-14.943,-9.637,16.586)
P: (-9.142,-6.448,21.141)
C4': (-12.366,-8.359,20.244)
C2': (-13.666,-10.263,19.680)
C2: (-16.689,-10.671,15.734)
N1: (-16.277,-10.544,14.471)
N3: (-16.107,-10.259,16.857)
N6: (-14.696,-9.784,12.970)
N7: (-13.189,-8.744,15.435)
N9: (-14.062,-9.075,17.482)
O5': (-10.179,-7.632,20.917)
O3': (-11.743,-10.528,21.168)
Image (generated by PyMOL):