Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:11166:11230
Extra
PDB:
ATOM 1 O3' A A1165 20.064 -3.573 -32.215 1.00143.52 O
ATOM 2 P G A1166 19.128 -2.685 -31.226 1.00157.84 P
ATOM 3 OP1 G A1166 18.036 -3.569 -30.741 1.00158.76 O
ATOM 4 OP2 G A1166 18.759 -1.458 -31.967 1.00158.02 O
ATOM 5 O5' G A1166 20.105 -2.307 -30.018 1.00157.05 O
ATOM 6 C5' G A1166 20.968 -1.179 -30.112 1.00156.29 C
ATOM 7 C4' G A1166 21.069 -0.408 -28.824 1.00156.14 C
ATOM 8 O4' G A1166 22.436 0.036 -28.687 1.00155.05 O
ATOM 9 C3' G A1166 20.248 0.864 -28.797 1.00156.66 C
ATOM 10 O3' G A1166 20.130 1.322 -27.446 1.00156.71 O
ATOM 11 C2' G A1166 21.149 1.806 -29.575 1.00155.89 C
ATOM 12 O2' G A1166 20.894 3.173 -29.360 1.00155.97 O
ATOM 13 C1' G A1166 22.536 1.397 -29.069 1.00154.86 C
ATOM 14 N9 G A1166 23.571 1.477 -30.092 1.00154.06 N
ATOM 15 C8 G A1166 23.547 0.772 -31.267 1.00154.14 C
ATOM 16 N7 G A1166 24.589 0.991 -32.014 1.00153.33 N
ATOM 17 C5 G A1166 25.352 1.891 -31.281 1.00152.66 C
ATOM 18 C6 G A1166 26.601 2.493 -31.594 1.00151.66 C
ATOM 19 O6 G A1166 27.300 2.342 -32.613 1.00151.14 O
ATOM 20 N1 G A1166 27.009 3.344 -30.562 1.00151.27 N
ATOM 21 C2 G A1166 26.316 3.588 -29.396 1.00151.77 C
ATOM 22 N2 G A1166 26.883 4.441 -28.533 1.00151.27 N
ATOM 23 N3 G A1166 25.154 3.033 -29.099 1.00152.71 N
ATOM 24 C4 G A1166 24.738 2.200 -30.079 1.00153.10 C
ATOM 25 P A A1167 18.716 1.847 -26.880 1.00108.54 P
ATOM 26 OP1 A A1167 17.658 1.295 -27.773 1.00109.40 O
ATOM 27 OP2 A A1167 18.821 3.318 -26.719 1.00108.33 O
ATOM 28 O5' A A1167 18.630 1.157 -25.450 1.00108.66 O
TER
ATOM 1 O3' G B1229 28.801 7.604 -25.334 1.00137.22 O
ATOM 2 P A B1230 30.338 7.178 -25.241 1.00133.92 P
ATOM 3 OP1 A B1230 31.133 8.434 -25.224 1.00133.22 O
ATOM 4 OP2 A B1230 30.578 6.189 -26.331 1.00133.82 O
ATOM 5 O5' A B1230 30.441 6.455 -23.828 1.00133.90 O
ATOM 6 C5' A B1230 29.722 6.928 -22.697 1.00134.41 C
ATOM 7 C4' A B1230 29.398 5.799 -21.753 1.00134.74 C
ATOM 8 O4' A B1230 28.150 5.174 -22.170 1.00135.75 O
ATOM 9 C3' A B1230 30.440 4.677 -21.699 1.00134.04 C
ATOM 10 O3' A B1230 30.473 4.143 -20.375 1.00134.05 O
ATOM 11 C2' A B1230 29.857 3.645 -22.668 1.00134.57 C
ATOM 12 O2' A B1230 30.296 2.317 -22.466 1.00134.34 O
ATOM 13 C1' A B1230 28.363 3.796 -22.411 1.00135.70 C
ATOM 14 N9 A B1230 27.513 3.391 -23.532 1.00136.39 N
ATOM 15 C8 A B1230 27.414 3.962 -24.773 1.00136.42 C
ATOM 16 N7 A B1230 26.539 3.373 -25.551 1.00137.14 N
ATOM 17 C5 A B1230 26.022 2.346 -24.772 1.00137.62 C
ATOM 18 C6 A B1230 25.046 1.351 -25.008 1.00138.45 C
ATOM 19 N6 A B1230 24.385 1.214 -26.158 1.00138.98 N
ATOM 20 N1 A B1230 24.763 0.479 -24.013 1.00138.74 N
ATOM 21 C2 A B1230 25.421 0.609 -22.855 1.00138.23 C
ATOM 22 N3 A B1230 26.350 1.504 -22.515 1.00137.44 N
ATOM 23 C4 A B1230 26.611 2.354 -23.524 1.00137.17 C
ATOM 24 P A B1231 31.610 3.085 -19.918 1.00124.60 P
ATOM 25 OP1 A B1231 32.620 3.838 -19.108 1.00123.76 O
ATOM 26 OP2 A B1231 32.060 2.350 -21.147 1.00124.32 O
ATOM 27 O5' A B1231 30.797 2.098 -18.960 1.00125.30 O
TER
ATOM 2 P G A1166 19.128 -2.685 -31.226 1.00157.84 P
ATOM 3 OP1 G A1166 18.036 -3.569 -30.741 1.00158.76 O
ATOM 4 OP2 G A1166 18.759 -1.458 -31.967 1.00158.02 O
ATOM 5 O5' G A1166 20.105 -2.307 -30.018 1.00157.05 O
ATOM 6 C5' G A1166 20.968 -1.179 -30.112 1.00156.29 C
ATOM 7 C4' G A1166 21.069 -0.408 -28.824 1.00156.14 C
ATOM 8 O4' G A1166 22.436 0.036 -28.687 1.00155.05 O
ATOM 9 C3' G A1166 20.248 0.864 -28.797 1.00156.66 C
ATOM 10 O3' G A1166 20.130 1.322 -27.446 1.00156.71 O
ATOM 11 C2' G A1166 21.149 1.806 -29.575 1.00155.89 C
ATOM 12 O2' G A1166 20.894 3.173 -29.360 1.00155.97 O
ATOM 13 C1' G A1166 22.536 1.397 -29.069 1.00154.86 C
ATOM 14 N9 G A1166 23.571 1.477 -30.092 1.00154.06 N
ATOM 15 C8 G A1166 23.547 0.772 -31.267 1.00154.14 C
ATOM 16 N7 G A1166 24.589 0.991 -32.014 1.00153.33 N
ATOM 17 C5 G A1166 25.352 1.891 -31.281 1.00152.66 C
ATOM 18 C6 G A1166 26.601 2.493 -31.594 1.00151.66 C
ATOM 19 O6 G A1166 27.300 2.342 -32.613 1.00151.14 O
ATOM 20 N1 G A1166 27.009 3.344 -30.562 1.00151.27 N
ATOM 21 C2 G A1166 26.316 3.588 -29.396 1.00151.77 C
ATOM 22 N2 G A1166 26.883 4.441 -28.533 1.00151.27 N
ATOM 23 N3 G A1166 25.154 3.033 -29.099 1.00152.71 N
ATOM 24 C4 G A1166 24.738 2.200 -30.079 1.00153.10 C
ATOM 25 P A A1167 18.716 1.847 -26.880 1.00108.54 P
ATOM 26 OP1 A A1167 17.658 1.295 -27.773 1.00109.40 O
ATOM 27 OP2 A A1167 18.821 3.318 -26.719 1.00108.33 O
ATOM 28 O5' A A1167 18.630 1.157 -25.450 1.00108.66 O
TER
ATOM 1 O3' G B1229 28.801 7.604 -25.334 1.00137.22 O
ATOM 2 P A B1230 30.338 7.178 -25.241 1.00133.92 P
ATOM 3 OP1 A B1230 31.133 8.434 -25.224 1.00133.22 O
ATOM 4 OP2 A B1230 30.578 6.189 -26.331 1.00133.82 O
ATOM 5 O5' A B1230 30.441 6.455 -23.828 1.00133.90 O
ATOM 6 C5' A B1230 29.722 6.928 -22.697 1.00134.41 C
ATOM 7 C4' A B1230 29.398 5.799 -21.753 1.00134.74 C
ATOM 8 O4' A B1230 28.150 5.174 -22.170 1.00135.75 O
ATOM 9 C3' A B1230 30.440 4.677 -21.699 1.00134.04 C
ATOM 10 O3' A B1230 30.473 4.143 -20.375 1.00134.05 O
ATOM 11 C2' A B1230 29.857 3.645 -22.668 1.00134.57 C
ATOM 12 O2' A B1230 30.296 2.317 -22.466 1.00134.34 O
ATOM 13 C1' A B1230 28.363 3.796 -22.411 1.00135.70 C
ATOM 14 N9 A B1230 27.513 3.391 -23.532 1.00136.39 N
ATOM 15 C8 A B1230 27.414 3.962 -24.773 1.00136.42 C
ATOM 16 N7 A B1230 26.539 3.373 -25.551 1.00137.14 N
ATOM 17 C5 A B1230 26.022 2.346 -24.772 1.00137.62 C
ATOM 18 C6 A B1230 25.046 1.351 -25.008 1.00138.45 C
ATOM 19 N6 A B1230 24.385 1.214 -26.158 1.00138.98 N
ATOM 20 N1 A B1230 24.763 0.479 -24.013 1.00138.74 N
ATOM 21 C2 A B1230 25.421 0.609 -22.855 1.00138.23 C
ATOM 22 N3 A B1230 26.350 1.504 -22.515 1.00137.44 N
ATOM 23 C4 A B1230 26.611 2.354 -23.524 1.00137.17 C
ATOM 24 P A B1231 31.610 3.085 -19.918 1.00124.60 P
ATOM 25 OP1 A B1231 32.620 3.838 -19.108 1.00123.76 O
ATOM 26 OP2 A B1231 32.060 2.350 -21.147 1.00124.32 O
ATOM 27 O5' A B1231 30.797 2.098 -18.960 1.00125.30 O
TER
Atoms:
OP1: (18.036,-3.569,-30.741)
OP2: (18.759,-1.458,-31.967)
C3': (20.248,0.864,-28.797)
C1': (22.536,1.397,-29.069)
C5': (20.968,-1.179,-30.112)
O6: (27.300,2.342,-32.613)
O4': (22.436,0.036,-28.687)
C8: (23.547,0.772,-31.267)
C2: (26.316,3.588,-29.396)
C6: (26.601,2.493,-31.594)
C5: (25.352,1.891,-31.281)
C4: (24.738,2.200,-30.079)
P: (19.128,-2.685,-31.226)
C4': (21.069,-0.408,-28.824)
C2': (21.149,1.806,-29.575)
O2': (20.894,3.173,-29.360)
N1: (27.009,3.344,-30.562)
N2: (26.883,4.441,-28.533)
N3: (25.154,3.033,-29.099)
N7: (24.589,0.991,-32.014)
N9: (23.571,1.477,-30.092)
O5': (20.105,-2.307,-30.018)
O3': (20.130,1.322,-27.446)
OP2: (18.759,-1.458,-31.967)
C3': (20.248,0.864,-28.797)
C1': (22.536,1.397,-29.069)
C5': (20.968,-1.179,-30.112)
O6: (27.300,2.342,-32.613)
O4': (22.436,0.036,-28.687)
C8: (23.547,0.772,-31.267)
C2: (26.316,3.588,-29.396)
C6: (26.601,2.493,-31.594)
C5: (25.352,1.891,-31.281)
C4: (24.738,2.200,-30.079)
P: (19.128,-2.685,-31.226)
C4': (21.069,-0.408,-28.824)
C2': (21.149,1.806,-29.575)
O2': (20.894,3.173,-29.360)
N1: (27.009,3.344,-30.562)
N2: (26.883,4.441,-28.533)
N3: (25.154,3.033,-29.099)
N7: (24.589,0.991,-32.014)
N9: (23.571,1.477,-30.092)
O5': (20.105,-2.307,-30.018)
O3': (20.130,1.322,-27.446)
OP1: (31.133,8.434,-25.224)
OP2: (30.578,6.189,-26.331)
C3': (30.440,4.677,-21.699)
C1': (28.363,3.796,-22.411)
C5': (29.722,6.928,-22.697)
O4': (28.150,5.174,-22.170)
C8: (27.414,3.962,-24.773)
O2': (30.296,2.317,-22.466)
C6: (25.046,1.351,-25.008)
C5: (26.022,2.346,-24.772)
C4: (26.611,2.354,-23.524)
P: (30.338,7.178,-25.241)
C4': (29.398,5.799,-21.753)
C2': (29.857,3.645,-22.668)
C2: (25.421,0.609,-22.855)
N1: (24.763,0.479,-24.013)
N3: (26.350,1.504,-22.515)
N6: (24.385,1.214,-26.158)
N7: (26.539,3.373,-25.551)
N9: (27.513,3.391,-23.532)
O5': (30.441,6.455,-23.828)
O3': (30.473,4.143,-20.375)
OP2: (30.578,6.189,-26.331)
C3': (30.440,4.677,-21.699)
C1': (28.363,3.796,-22.411)
C5': (29.722,6.928,-22.697)
O4': (28.150,5.174,-22.170)
C8: (27.414,3.962,-24.773)
O2': (30.296,2.317,-22.466)
C6: (25.046,1.351,-25.008)
C5: (26.022,2.346,-24.772)
C4: (26.611,2.354,-23.524)
P: (30.338,7.178,-25.241)
C4': (29.398,5.799,-21.753)
C2': (29.857,3.645,-22.668)
C2: (25.421,0.609,-22.855)
N1: (24.763,0.479,-24.013)
N3: (26.350,1.504,-22.515)
N6: (24.385,1.214,-26.158)
N7: (26.539,3.373,-25.551)
N9: (27.513,3.391,-23.532)
O5': (30.441,6.455,-23.828)
O3': (30.473,4.143,-20.375)
Image (generated by PyMOL):