Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNI:A1927:A1223
Extra
PDB:
ATOM 1 O3' U A1926 45.669 -81.659 -7.984 1.00 41.19 O
ATOM 2 P G A1927 46.907 -82.639 -8.342 1.00 42.04 P
ATOM 3 OP1 G A1927 46.814 -83.081 -9.762 1.00 30.15 O
ATOM 4 OP2 G A1927 47.013 -83.648 -7.256 1.00 39.23 O
ATOM 5 O5' G A1927 48.186 -81.716 -8.202 1.00 37.02 O
ATOM 6 C5' G A1927 48.213 -80.462 -8.856 1.00 42.13 C
ATOM 7 C4' G A1927 49.220 -79.564 -8.206 1.00 39.57 C
ATOM 8 O4' G A1927 48.843 -79.322 -6.826 1.00 39.68 O
ATOM 9 C3' G A1927 50.617 -80.133 -8.129 1.00 42.34 C
ATOM 10 O3' G A1927 51.257 -79.976 -9.387 1.00 39.02 O
ATOM 11 C2' G A1927 51.208 -79.322 -6.980 1.00 41.96 C
ATOM 12 O2' G A1927 51.540 -78.018 -7.392 1.00 37.33 O
ATOM 13 C1' G A1927 50.009 -79.217 -6.035 1.00 42.71 C
ATOM 14 N9 G A1927 50.011 -80.293 -5.043 1.00 41.45 N
ATOM 15 C8 G A1927 49.454 -81.555 -5.145 1.00 44.20 C
ATOM 16 N7 G A1927 49.686 -82.299 -4.097 1.00 44.45 N
ATOM 17 C5 G A1927 50.430 -81.478 -3.258 1.00 44.65 C
ATOM 18 C6 G A1927 50.994 -81.735 -2.002 1.00 48.86 C
ATOM 19 O6 G A1927 50.994 -82.779 -1.374 1.00 54.45 O
ATOM 20 N1 G A1927 51.633 -80.619 -1.482 1.00 44.13 N
ATOM 21 C2 G A1927 51.742 -79.417 -2.115 1.00 41.19 C
ATOM 22 N2 G A1927 52.372 -78.453 -1.453 1.00 35.33 N
ATOM 23 N3 G A1927 51.261 -79.173 -3.310 1.00 44.12 N
ATOM 24 C4 G A1927 50.615 -80.237 -3.817 1.00 43.72 C
ATOM 25 P A A1928 52.752 -80.483 -9.594 1.00 37.94 P
ATOM 26 OP1 A A1928 52.948 -80.632 -11.055 1.00 32.16 O
ATOM 27 OP2 A A1928 52.988 -81.646 -8.709 1.00 37.53 O
ATOM 28 O5' A A1928 53.570 -79.241 -9.022 1.00 32.22 O
TER
ATOM 1 O3' U B1222 56.498 -77.566 2.793 1.00 42.31 O
ATOM 2 P A B1223 55.422 -76.450 3.196 1.00 38.10 P
ATOM 3 OP1 A B1223 55.889 -75.946 4.519 1.00 39.05 O
ATOM 4 OP2 A B1223 54.055 -77.013 3.057 1.00 35.29 O
ATOM 5 O5' A B1223 55.602 -75.298 2.104 1.00 34.16 O
ATOM 6 C5' A B1223 56.547 -74.245 2.315 1.00 40.35 C
ATOM 7 C4' A B1223 56.278 -73.078 1.390 1.00 35.27 C
ATOM 8 O4' A B1223 56.586 -73.472 0.031 1.00 35.85 O
ATOM 9 C3' A B1223 54.856 -72.558 1.315 1.00 43.14 C
ATOM 10 O3' A B1223 54.546 -71.613 2.324 1.00 46.97 O
ATOM 11 C2' A B1223 54.828 -71.902 -0.055 1.00 42.74 C
ATOM 12 O2' A B1223 55.431 -70.621 -0.026 1.00 49.42 O
ATOM 13 C1' A B1223 55.690 -72.852 -0.873 1.00 36.05 C
ATOM 14 N9 A B1223 54.889 -73.913 -1.479 1.00 38.06 N
ATOM 15 C8 A B1223 54.552 -75.109 -0.891 1.00 36.64 C
ATOM 16 N7 A B1223 53.856 -75.902 -1.666 1.00 35.64 N
ATOM 17 C5 A B1223 53.718 -75.180 -2.840 1.00 31.28 C
ATOM 18 C6 A B1223 53.104 -75.487 -4.053 1.00 34.38 C
ATOM 19 N6 A B1223 52.485 -76.646 -4.292 1.00 39.31 N
ATOM 20 N1 A B1223 53.149 -74.559 -5.033 1.00 29.84 N
ATOM 21 C2 A B1223 53.770 -73.398 -4.790 1.00 35.18 C
ATOM 22 N3 A B1223 54.397 -72.994 -3.687 1.00 41.30 N
ATOM 23 C4 A B1223 54.337 -73.947 -2.738 1.00 36.00 C
ATOM 24 P A B1224 53.015 -71.166 2.552 1.00 51.77 P
ATOM 25 OP1 A B1224 53.135 -69.749 2.990 1.00 43.51 O
ATOM 26 OP2 A B1224 52.380 -72.173 3.461 1.00 48.20 O
ATOM 27 O5' A B1224 52.311 -71.229 1.105 1.00 41.54 O
TER
ATOM 2 P G A1927 46.907 -82.639 -8.342 1.00 42.04 P
ATOM 3 OP1 G A1927 46.814 -83.081 -9.762 1.00 30.15 O
ATOM 4 OP2 G A1927 47.013 -83.648 -7.256 1.00 39.23 O
ATOM 5 O5' G A1927 48.186 -81.716 -8.202 1.00 37.02 O
ATOM 6 C5' G A1927 48.213 -80.462 -8.856 1.00 42.13 C
ATOM 7 C4' G A1927 49.220 -79.564 -8.206 1.00 39.57 C
ATOM 8 O4' G A1927 48.843 -79.322 -6.826 1.00 39.68 O
ATOM 9 C3' G A1927 50.617 -80.133 -8.129 1.00 42.34 C
ATOM 10 O3' G A1927 51.257 -79.976 -9.387 1.00 39.02 O
ATOM 11 C2' G A1927 51.208 -79.322 -6.980 1.00 41.96 C
ATOM 12 O2' G A1927 51.540 -78.018 -7.392 1.00 37.33 O
ATOM 13 C1' G A1927 50.009 -79.217 -6.035 1.00 42.71 C
ATOM 14 N9 G A1927 50.011 -80.293 -5.043 1.00 41.45 N
ATOM 15 C8 G A1927 49.454 -81.555 -5.145 1.00 44.20 C
ATOM 16 N7 G A1927 49.686 -82.299 -4.097 1.00 44.45 N
ATOM 17 C5 G A1927 50.430 -81.478 -3.258 1.00 44.65 C
ATOM 18 C6 G A1927 50.994 -81.735 -2.002 1.00 48.86 C
ATOM 19 O6 G A1927 50.994 -82.779 -1.374 1.00 54.45 O
ATOM 20 N1 G A1927 51.633 -80.619 -1.482 1.00 44.13 N
ATOM 21 C2 G A1927 51.742 -79.417 -2.115 1.00 41.19 C
ATOM 22 N2 G A1927 52.372 -78.453 -1.453 1.00 35.33 N
ATOM 23 N3 G A1927 51.261 -79.173 -3.310 1.00 44.12 N
ATOM 24 C4 G A1927 50.615 -80.237 -3.817 1.00 43.72 C
ATOM 25 P A A1928 52.752 -80.483 -9.594 1.00 37.94 P
ATOM 26 OP1 A A1928 52.948 -80.632 -11.055 1.00 32.16 O
ATOM 27 OP2 A A1928 52.988 -81.646 -8.709 1.00 37.53 O
ATOM 28 O5' A A1928 53.570 -79.241 -9.022 1.00 32.22 O
TER
ATOM 1 O3' U B1222 56.498 -77.566 2.793 1.00 42.31 O
ATOM 2 P A B1223 55.422 -76.450 3.196 1.00 38.10 P
ATOM 3 OP1 A B1223 55.889 -75.946 4.519 1.00 39.05 O
ATOM 4 OP2 A B1223 54.055 -77.013 3.057 1.00 35.29 O
ATOM 5 O5' A B1223 55.602 -75.298 2.104 1.00 34.16 O
ATOM 6 C5' A B1223 56.547 -74.245 2.315 1.00 40.35 C
ATOM 7 C4' A B1223 56.278 -73.078 1.390 1.00 35.27 C
ATOM 8 O4' A B1223 56.586 -73.472 0.031 1.00 35.85 O
ATOM 9 C3' A B1223 54.856 -72.558 1.315 1.00 43.14 C
ATOM 10 O3' A B1223 54.546 -71.613 2.324 1.00 46.97 O
ATOM 11 C2' A B1223 54.828 -71.902 -0.055 1.00 42.74 C
ATOM 12 O2' A B1223 55.431 -70.621 -0.026 1.00 49.42 O
ATOM 13 C1' A B1223 55.690 -72.852 -0.873 1.00 36.05 C
ATOM 14 N9 A B1223 54.889 -73.913 -1.479 1.00 38.06 N
ATOM 15 C8 A B1223 54.552 -75.109 -0.891 1.00 36.64 C
ATOM 16 N7 A B1223 53.856 -75.902 -1.666 1.00 35.64 N
ATOM 17 C5 A B1223 53.718 -75.180 -2.840 1.00 31.28 C
ATOM 18 C6 A B1223 53.104 -75.487 -4.053 1.00 34.38 C
ATOM 19 N6 A B1223 52.485 -76.646 -4.292 1.00 39.31 N
ATOM 20 N1 A B1223 53.149 -74.559 -5.033 1.00 29.84 N
ATOM 21 C2 A B1223 53.770 -73.398 -4.790 1.00 35.18 C
ATOM 22 N3 A B1223 54.397 -72.994 -3.687 1.00 41.30 N
ATOM 23 C4 A B1223 54.337 -73.947 -2.738 1.00 36.00 C
ATOM 24 P A B1224 53.015 -71.166 2.552 1.00 51.77 P
ATOM 25 OP1 A B1224 53.135 -69.749 2.990 1.00 43.51 O
ATOM 26 OP2 A B1224 52.380 -72.173 3.461 1.00 48.20 O
ATOM 27 O5' A B1224 52.311 -71.229 1.105 1.00 41.54 O
TER
Atoms:
OP1: (46.814,-83.081,-9.762)
OP2: (47.013,-83.648,-7.256)
C3': (50.617,-80.133,-8.129)
C1': (50.009,-79.217,-6.035)
C5': (48.213,-80.462,-8.856)
O6: (50.994,-82.779,-1.374)
O4': (48.843,-79.322,-6.826)
C8: (49.454,-81.555,-5.145)
C2: (51.742,-79.417,-2.115)
C6: (50.994,-81.735,-2.002)
C5: (50.430,-81.478,-3.258)
C4: (50.615,-80.237,-3.817)
P: (46.907,-82.639,-8.342)
C4': (49.220,-79.564,-8.206)
C2': (51.208,-79.322,-6.980)
O2': (51.540,-78.018,-7.392)
N1: (51.633,-80.619,-1.482)
N2: (52.372,-78.453,-1.453)
N3: (51.261,-79.173,-3.310)
N7: (49.686,-82.299,-4.097)
N9: (50.011,-80.293,-5.043)
O5': (48.186,-81.716,-8.202)
O3': (51.257,-79.976,-9.387)
OP2: (47.013,-83.648,-7.256)
C3': (50.617,-80.133,-8.129)
C1': (50.009,-79.217,-6.035)
C5': (48.213,-80.462,-8.856)
O6: (50.994,-82.779,-1.374)
O4': (48.843,-79.322,-6.826)
C8: (49.454,-81.555,-5.145)
C2: (51.742,-79.417,-2.115)
C6: (50.994,-81.735,-2.002)
C5: (50.430,-81.478,-3.258)
C4: (50.615,-80.237,-3.817)
P: (46.907,-82.639,-8.342)
C4': (49.220,-79.564,-8.206)
C2': (51.208,-79.322,-6.980)
O2': (51.540,-78.018,-7.392)
N1: (51.633,-80.619,-1.482)
N2: (52.372,-78.453,-1.453)
N3: (51.261,-79.173,-3.310)
N7: (49.686,-82.299,-4.097)
N9: (50.011,-80.293,-5.043)
O5': (48.186,-81.716,-8.202)
O3': (51.257,-79.976,-9.387)
OP1: (55.889,-75.946,4.519)
OP2: (54.055,-77.013,3.057)
C3': (54.856,-72.558,1.315)
C1': (55.690,-72.852,-0.873)
C5': (56.547,-74.245,2.315)
O4': (56.586,-73.472,0.031)
C8: (54.552,-75.109,-0.891)
O2': (55.431,-70.621,-0.026)
C6: (53.104,-75.487,-4.053)
C5: (53.718,-75.180,-2.840)
C4: (54.337,-73.947,-2.738)
P: (55.422,-76.450,3.196)
C4': (56.278,-73.078,1.390)
C2': (54.828,-71.902,-0.055)
C2: (53.770,-73.398,-4.790)
N1: (53.149,-74.559,-5.033)
N3: (54.397,-72.994,-3.687)
N6: (52.485,-76.646,-4.292)
N7: (53.856,-75.902,-1.666)
N9: (54.889,-73.913,-1.479)
O5': (55.602,-75.298,2.104)
O3': (54.546,-71.613,2.324)
OP2: (54.055,-77.013,3.057)
C3': (54.856,-72.558,1.315)
C1': (55.690,-72.852,-0.873)
C5': (56.547,-74.245,2.315)
O4': (56.586,-73.472,0.031)
C8: (54.552,-75.109,-0.891)
O2': (55.431,-70.621,-0.026)
C6: (53.104,-75.487,-4.053)
C5: (53.718,-75.180,-2.840)
C4: (54.337,-73.947,-2.738)
P: (55.422,-76.450,3.196)
C4': (56.278,-73.078,1.390)
C2': (54.828,-71.902,-0.055)
C2: (53.770,-73.398,-4.790)
N1: (53.149,-74.559,-5.033)
N3: (54.397,-72.994,-3.687)
N6: (52.485,-76.646,-4.292)
N7: (53.856,-75.902,-1.666)
N9: (54.889,-73.913,-1.479)
O5': (55.602,-75.298,2.104)
O3': (54.546,-71.613,2.324)
Image (generated by PyMOL):