Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2PXD:B34:B17
Extra
PDB:
ATOM 1 O3' C A 33 98.407 -20.381 41.239 1.00 26.91 O
ATOM 2 P A A 34 98.933 -19.804 42.638 1.00 25.26 P
ATOM 3 OP1 A A 34 100.203 -19.072 42.417 1.00 24.85 O
ATOM 4 OP2 A A 34 98.899 -20.955 43.581 1.00 23.38 O
ATOM 5 O5' A A 34 97.826 -18.734 43.032 1.00 23.05 O
ATOM 6 C5' A A 34 97.730 -17.512 42.314 1.00 23.39 C
ATOM 7 C4' A A 34 96.585 -16.678 42.841 1.00 25.95 C
ATOM 8 O4' A A 34 95.333 -17.391 42.645 1.00 25.32 O
ATOM 9 C3' A A 34 96.593 -16.417 44.333 1.00 27.75 C
ATOM 10 O3' A A 34 97.458 -15.352 44.683 1.00 31.27 O
ATOM 11 C2' A A 34 95.137 -16.082 44.598 1.00 24.96 C
ATOM 12 O2' A A 34 94.795 -14.786 44.168 1.00 26.80 O
ATOM 13 C1' A A 34 94.447 -17.107 43.710 1.00 21.31 C
ATOM 14 N9 A A 34 94.193 -18.350 44.418 1.00 13.35 N
ATOM 15 C8 A A 34 94.809 -19.567 44.240 1.00 12.87 C
ATOM 16 N7 A A 34 94.331 -20.516 45.013 1.00 11.16 N
ATOM 17 C5 A A 34 93.345 -19.877 45.751 1.00 10.33 C
ATOM 18 C6 A A 34 92.466 -20.333 46.728 1.00 9.77 C
ATOM 19 N6 A A 34 92.425 -21.596 47.147 1.00 14.09 N
ATOM 20 N1 A A 34 91.608 -19.444 47.267 1.00 9.26 N
ATOM 21 C2 A A 34 91.640 -18.181 46.830 1.00 6.91 C
ATOM 22 N3 A A 34 92.414 -17.632 45.907 1.00 7.78 N
ATOM 23 C4 A A 34 93.257 -18.542 45.401 1.00 10.18 C
ATOM 24 P G A 35 98.276 -15.438 46.060 1.00 38.30 P
ATOM 25 OP1 G A 35 98.957 -14.129 46.235 1.00 30.21 O
ATOM 26 OP2 G A 35 99.068 -16.699 46.063 1.00 30.03 O
ATOM 27 O5' G A 35 97.139 -15.622 47.161 1.00 38.73 O
TER
ATOM 1 O3' U B 16 91.518 -29.028 52.064 1.00 44.81 O
ATOM 2 P C B 17 90.721 -29.709 50.858 1.00 57.46 P
ATOM 3 OP1 C B 17 89.434 -30.179 51.424 1.00 37.88 O
ATOM 4 OP2 C B 17 91.639 -30.683 50.203 1.00 37.16 O
ATOM 5 O5' C B 17 90.447 -28.482 49.880 1.00 57.10 O
ATOM 6 C5' C B 17 89.884 -27.291 50.408 1.00 57.84 C
ATOM 7 C4' C B 17 90.255 -26.081 49.578 1.00 58.32 C
ATOM 8 O4' C B 17 91.680 -26.024 49.330 1.00 55.76 O
ATOM 9 C3' C B 17 89.672 -25.966 48.187 1.00 59.94 C
ATOM 10 O3' C B 17 88.322 -25.529 48.293 1.00 65.59 O
ATOM 11 C2' C B 17 90.556 -24.877 47.579 1.00 57.14 C
ATOM 12 O2' C B 17 90.165 -23.577 47.981 1.00 56.82 O
ATOM 13 C1' C B 17 91.916 -25.195 48.204 1.00 52.26 C
ATOM 14 N1 C B 17 92.848 -25.876 47.298 1.00 26.29 N
ATOM 15 C2 C B 17 93.421 -25.149 46.255 1.00 23.99 C
ATOM 16 O2 C B 17 93.112 -23.957 46.115 1.00 24.12 O
ATOM 17 N3 C B 17 94.294 -25.759 45.426 1.00 22.10 N
ATOM 18 C4 C B 17 94.601 -27.041 45.612 1.00 21.46 C
ATOM 19 N4 C B 17 95.483 -27.601 44.784 1.00 20.67 N
ATOM 20 C5 C B 17 94.023 -27.808 46.661 1.00 22.54 C
ATOM 21 C6 C B 17 93.161 -27.191 47.474 1.00 24.02 C
ATOM 22 P A B 18 87.408 -25.410 46.972 1.00 71.46 P
ATOM 23 OP1 A B 18 86.292 -26.391 47.123 1.00 51.65 O
ATOM 24 OP2 A B 18 88.316 -25.505 45.782 1.00 51.06 O
ATOM 25 O5' A B 18 86.819 -23.928 47.100 1.00 64.79 O
TER
ATOM 2 P A A 34 98.933 -19.804 42.638 1.00 25.26 P
ATOM 3 OP1 A A 34 100.203 -19.072 42.417 1.00 24.85 O
ATOM 4 OP2 A A 34 98.899 -20.955 43.581 1.00 23.38 O
ATOM 5 O5' A A 34 97.826 -18.734 43.032 1.00 23.05 O
ATOM 6 C5' A A 34 97.730 -17.512 42.314 1.00 23.39 C
ATOM 7 C4' A A 34 96.585 -16.678 42.841 1.00 25.95 C
ATOM 8 O4' A A 34 95.333 -17.391 42.645 1.00 25.32 O
ATOM 9 C3' A A 34 96.593 -16.417 44.333 1.00 27.75 C
ATOM 10 O3' A A 34 97.458 -15.352 44.683 1.00 31.27 O
ATOM 11 C2' A A 34 95.137 -16.082 44.598 1.00 24.96 C
ATOM 12 O2' A A 34 94.795 -14.786 44.168 1.00 26.80 O
ATOM 13 C1' A A 34 94.447 -17.107 43.710 1.00 21.31 C
ATOM 14 N9 A A 34 94.193 -18.350 44.418 1.00 13.35 N
ATOM 15 C8 A A 34 94.809 -19.567 44.240 1.00 12.87 C
ATOM 16 N7 A A 34 94.331 -20.516 45.013 1.00 11.16 N
ATOM 17 C5 A A 34 93.345 -19.877 45.751 1.00 10.33 C
ATOM 18 C6 A A 34 92.466 -20.333 46.728 1.00 9.77 C
ATOM 19 N6 A A 34 92.425 -21.596 47.147 1.00 14.09 N
ATOM 20 N1 A A 34 91.608 -19.444 47.267 1.00 9.26 N
ATOM 21 C2 A A 34 91.640 -18.181 46.830 1.00 6.91 C
ATOM 22 N3 A A 34 92.414 -17.632 45.907 1.00 7.78 N
ATOM 23 C4 A A 34 93.257 -18.542 45.401 1.00 10.18 C
ATOM 24 P G A 35 98.276 -15.438 46.060 1.00 38.30 P
ATOM 25 OP1 G A 35 98.957 -14.129 46.235 1.00 30.21 O
ATOM 26 OP2 G A 35 99.068 -16.699 46.063 1.00 30.03 O
ATOM 27 O5' G A 35 97.139 -15.622 47.161 1.00 38.73 O
TER
ATOM 1 O3' U B 16 91.518 -29.028 52.064 1.00 44.81 O
ATOM 2 P C B 17 90.721 -29.709 50.858 1.00 57.46 P
ATOM 3 OP1 C B 17 89.434 -30.179 51.424 1.00 37.88 O
ATOM 4 OP2 C B 17 91.639 -30.683 50.203 1.00 37.16 O
ATOM 5 O5' C B 17 90.447 -28.482 49.880 1.00 57.10 O
ATOM 6 C5' C B 17 89.884 -27.291 50.408 1.00 57.84 C
ATOM 7 C4' C B 17 90.255 -26.081 49.578 1.00 58.32 C
ATOM 8 O4' C B 17 91.680 -26.024 49.330 1.00 55.76 O
ATOM 9 C3' C B 17 89.672 -25.966 48.187 1.00 59.94 C
ATOM 10 O3' C B 17 88.322 -25.529 48.293 1.00 65.59 O
ATOM 11 C2' C B 17 90.556 -24.877 47.579 1.00 57.14 C
ATOM 12 O2' C B 17 90.165 -23.577 47.981 1.00 56.82 O
ATOM 13 C1' C B 17 91.916 -25.195 48.204 1.00 52.26 C
ATOM 14 N1 C B 17 92.848 -25.876 47.298 1.00 26.29 N
ATOM 15 C2 C B 17 93.421 -25.149 46.255 1.00 23.99 C
ATOM 16 O2 C B 17 93.112 -23.957 46.115 1.00 24.12 O
ATOM 17 N3 C B 17 94.294 -25.759 45.426 1.00 22.10 N
ATOM 18 C4 C B 17 94.601 -27.041 45.612 1.00 21.46 C
ATOM 19 N4 C B 17 95.483 -27.601 44.784 1.00 20.67 N
ATOM 20 C5 C B 17 94.023 -27.808 46.661 1.00 22.54 C
ATOM 21 C6 C B 17 93.161 -27.191 47.474 1.00 24.02 C
ATOM 22 P A B 18 87.408 -25.410 46.972 1.00 71.46 P
ATOM 23 OP1 A B 18 86.292 -26.391 47.123 1.00 51.65 O
ATOM 24 OP2 A B 18 88.316 -25.505 45.782 1.00 51.06 O
ATOM 25 O5' A B 18 86.819 -23.928 47.100 1.00 64.79 O
TER
Atoms:
OP1: (100.203,-19.072,42.417)
OP2: (98.899,-20.955,43.581)
C3': (96.593,-16.417,44.333)
C1': (94.447,-17.107,43.710)
C5': (97.730,-17.512,42.314)
O4': (95.333,-17.391,42.645)
C8: (94.809,-19.567,44.240)
O2': (94.795,-14.786,44.168)
C6: (92.466,-20.333,46.728)
C5: (93.345,-19.877,45.751)
C4: (93.257,-18.542,45.401)
P: (98.933,-19.804,42.638)
C4': (96.585,-16.678,42.841)
C2': (95.137,-16.082,44.598)
C2: (91.640,-18.181,46.830)
N1: (91.608,-19.444,47.267)
N3: (92.414,-17.632,45.907)
N6: (92.425,-21.596,47.147)
N7: (94.331,-20.516,45.013)
N9: (94.193,-18.350,44.418)
O5': (97.826,-18.734,43.032)
O3': (97.458,-15.352,44.683)
OP2: (98.899,-20.955,43.581)
C3': (96.593,-16.417,44.333)
C1': (94.447,-17.107,43.710)
C5': (97.730,-17.512,42.314)
O4': (95.333,-17.391,42.645)
C8: (94.809,-19.567,44.240)
O2': (94.795,-14.786,44.168)
C6: (92.466,-20.333,46.728)
C5: (93.345,-19.877,45.751)
C4: (93.257,-18.542,45.401)
P: (98.933,-19.804,42.638)
C4': (96.585,-16.678,42.841)
C2': (95.137,-16.082,44.598)
C2: (91.640,-18.181,46.830)
N1: (91.608,-19.444,47.267)
N3: (92.414,-17.632,45.907)
N6: (92.425,-21.596,47.147)
N7: (94.331,-20.516,45.013)
N9: (94.193,-18.350,44.418)
O5': (97.826,-18.734,43.032)
O3': (97.458,-15.352,44.683)
C2: (93.421,-25.149,46.255)
OP1: (89.434,-30.179,51.424)
OP2: (91.639,-30.683,50.203)
C4: (94.601,-27.041,45.612)
O5': (90.447,-28.482,49.880)
C3': (89.672,-25.966,48.187)
C1': (91.916,-25.195,48.204)
O4': (91.680,-26.024,49.330)
C5': (89.884,-27.291,50.408)
P: (90.721,-29.709,50.858)
O2: (93.112,-23.957,46.115)
C4': (90.255,-26.081,49.578)
C2': (90.556,-24.877,47.579)
O2': (90.165,-23.577,47.981)
N1: (92.848,-25.876,47.298)
N3: (94.294,-25.759,45.426)
N4: (95.483,-27.601,44.784)
C6: (93.161,-27.191,47.474)
C5: (94.023,-27.808,46.661)
O3': (88.322,-25.529,48.293)
OP1: (89.434,-30.179,51.424)
OP2: (91.639,-30.683,50.203)
C4: (94.601,-27.041,45.612)
O5': (90.447,-28.482,49.880)
C3': (89.672,-25.966,48.187)
C1': (91.916,-25.195,48.204)
O4': (91.680,-26.024,49.330)
C5': (89.884,-27.291,50.408)
P: (90.721,-29.709,50.858)
O2: (93.112,-23.957,46.115)
C4': (90.255,-26.081,49.578)
C2': (90.556,-24.877,47.579)
O2': (90.165,-23.577,47.981)
N1: (92.848,-25.876,47.298)
N3: (94.294,-25.759,45.426)
N4: (95.483,-27.601,44.784)
C6: (93.161,-27.191,47.474)
C5: (94.023,-27.808,46.661)
O3': (88.322,-25.529,48.293)
Image (generated by PyMOL):