Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:02540:02533
Extra
PDB:
ATOM 1 O3' G A2539 83.670 128.326 160.406 1.00 75.93 O
ATOM 2 P G A2540 82.567 129.439 160.034 1.00 72.53 P
ATOM 3 OP1 G A2540 82.259 129.271 158.592 1.00 73.00 O
ATOM 4 OP2 G A2540 83.022 130.757 160.535 1.00 72.80 O
ATOM 5 O5' G A2540 81.280 129.020 160.875 1.00 71.15 O
ATOM 6 C5' G A2540 80.368 128.013 160.399 1.00 68.20 C
ATOM 7 C4' G A2540 79.136 127.981 161.270 1.00 66.89 C
ATOM 8 O4' G A2540 79.499 127.548 162.609 1.00 66.78 O
ATOM 9 C3' G A2540 78.471 129.329 161.488 1.00 65.14 C
ATOM 10 O3' G A2540 77.626 129.696 160.410 1.00 64.18 O
ATOM 11 C2' G A2540 77.725 129.110 162.796 1.00 65.97 C
ATOM 12 O2' G A2540 76.520 128.393 162.636 1.00 64.12 O
ATOM 13 C1' G A2540 78.740 128.270 163.571 1.00 67.50 C
ATOM 14 N9 G A2540 79.659 129.117 164.331 1.00 69.46 N
ATOM 15 C8 G A2540 80.886 129.581 163.914 1.00 69.74 C
ATOM 16 N7 G A2540 81.468 130.350 164.792 1.00 70.75 N
ATOM 17 C5 G A2540 80.579 130.393 165.858 1.00 70.63 C
ATOM 18 C6 G A2540 80.667 131.076 167.099 1.00 70.65 C
ATOM 19 O6 G A2540 81.573 131.806 167.514 1.00 71.63 O
ATOM 20 N1 G A2540 79.547 130.844 167.890 1.00 70.06 N
ATOM 21 C2 G A2540 78.481 130.061 167.538 1.00 69.15 C
ATOM 22 N2 G A2540 77.498 129.969 168.445 1.00 68.30 N
ATOM 23 N3 G A2540 78.384 129.420 166.383 1.00 69.83 N
ATOM 24 C4 G A2540 79.461 129.630 165.596 1.00 69.60 C
ATOM 25 P A A2541 76.948 131.153 160.392 1.00 64.05 P
ATOM 26 OP1 A A2541 76.314 131.338 159.063 1.00 64.58 O
ATOM 27 OP2 A A2541 77.937 132.150 160.875 1.00 64.96 O
ATOM 28 O5' A A2541 75.802 131.034 161.487 1.00 62.61 O
TER
ATOM 1 O3' U B2532 74.772 130.717 173.292 1.00 67.36 O
ATOM 2 P A B2533 75.293 129.200 173.326 1.00 67.63 P
ATOM 3 OP1 A B2533 75.354 128.780 174.749 1.00 67.81 O
ATOM 4 OP2 A B2533 76.512 129.096 172.478 1.00 65.85 O
ATOM 5 O5' A B2533 74.105 128.391 172.647 1.00 67.71 O
ATOM 6 C5' A B2533 72.786 128.402 173.228 1.00 68.32 C
ATOM 7 C4' A B2533 71.810 127.727 172.303 1.00 69.94 C
ATOM 8 O4' A B2533 71.707 128.497 171.077 1.00 69.97 O
ATOM 9 C3' A B2533 72.222 126.333 171.859 1.00 70.17 C
ATOM 10 O3' A B2533 71.808 125.355 172.813 1.00 70.49 O
ATOM 11 C2' A B2533 71.510 126.193 170.519 1.00 69.89 C
ATOM 12 O2' A B2533 70.145 125.860 170.664 1.00 70.18 O
ATOM 13 C1' A B2533 71.619 127.619 169.967 1.00 69.70 C
ATOM 14 N9 A B2533 72.787 127.849 169.112 1.00 68.86 N
ATOM 15 C8 A B2533 73.921 128.570 169.411 1.00 68.73 C
ATOM 16 N7 A B2533 74.804 128.595 168.442 1.00 68.13 N
ATOM 17 C5 A B2533 74.216 127.842 167.436 1.00 67.58 C
ATOM 18 C6 A B2533 74.648 127.484 166.149 1.00 65.71 C
ATOM 19 N6 A B2533 75.819 127.851 165.634 1.00 64.52 N
ATOM 20 N1 A B2533 73.824 126.723 165.400 1.00 65.34 N
ATOM 21 C2 A B2533 72.648 126.352 165.917 1.00 66.63 C
ATOM 22 N3 A B2533 72.128 126.624 167.112 1.00 67.31 N
ATOM 23 C4 A B2533 72.972 127.380 167.833 1.00 67.91 C
ATOM 24 P C B2534 72.843 124.227 173.305 1.00 70.36 P
ATOM 25 OP1 C B2534 72.043 123.186 174.006 1.00 69.66 O
ATOM 26 OP2 C B2534 73.983 124.876 174.004 1.00 70.61 O
ATOM 27 O5' C B2534 73.404 123.598 171.957 1.00 69.66 O
TER
ATOM 2 P G A2540 82.567 129.439 160.034 1.00 72.53 P
ATOM 3 OP1 G A2540 82.259 129.271 158.592 1.00 73.00 O
ATOM 4 OP2 G A2540 83.022 130.757 160.535 1.00 72.80 O
ATOM 5 O5' G A2540 81.280 129.020 160.875 1.00 71.15 O
ATOM 6 C5' G A2540 80.368 128.013 160.399 1.00 68.20 C
ATOM 7 C4' G A2540 79.136 127.981 161.270 1.00 66.89 C
ATOM 8 O4' G A2540 79.499 127.548 162.609 1.00 66.78 O
ATOM 9 C3' G A2540 78.471 129.329 161.488 1.00 65.14 C
ATOM 10 O3' G A2540 77.626 129.696 160.410 1.00 64.18 O
ATOM 11 C2' G A2540 77.725 129.110 162.796 1.00 65.97 C
ATOM 12 O2' G A2540 76.520 128.393 162.636 1.00 64.12 O
ATOM 13 C1' G A2540 78.740 128.270 163.571 1.00 67.50 C
ATOM 14 N9 G A2540 79.659 129.117 164.331 1.00 69.46 N
ATOM 15 C8 G A2540 80.886 129.581 163.914 1.00 69.74 C
ATOM 16 N7 G A2540 81.468 130.350 164.792 1.00 70.75 N
ATOM 17 C5 G A2540 80.579 130.393 165.858 1.00 70.63 C
ATOM 18 C6 G A2540 80.667 131.076 167.099 1.00 70.65 C
ATOM 19 O6 G A2540 81.573 131.806 167.514 1.00 71.63 O
ATOM 20 N1 G A2540 79.547 130.844 167.890 1.00 70.06 N
ATOM 21 C2 G A2540 78.481 130.061 167.538 1.00 69.15 C
ATOM 22 N2 G A2540 77.498 129.969 168.445 1.00 68.30 N
ATOM 23 N3 G A2540 78.384 129.420 166.383 1.00 69.83 N
ATOM 24 C4 G A2540 79.461 129.630 165.596 1.00 69.60 C
ATOM 25 P A A2541 76.948 131.153 160.392 1.00 64.05 P
ATOM 26 OP1 A A2541 76.314 131.338 159.063 1.00 64.58 O
ATOM 27 OP2 A A2541 77.937 132.150 160.875 1.00 64.96 O
ATOM 28 O5' A A2541 75.802 131.034 161.487 1.00 62.61 O
TER
ATOM 1 O3' U B2532 74.772 130.717 173.292 1.00 67.36 O
ATOM 2 P A B2533 75.293 129.200 173.326 1.00 67.63 P
ATOM 3 OP1 A B2533 75.354 128.780 174.749 1.00 67.81 O
ATOM 4 OP2 A B2533 76.512 129.096 172.478 1.00 65.85 O
ATOM 5 O5' A B2533 74.105 128.391 172.647 1.00 67.71 O
ATOM 6 C5' A B2533 72.786 128.402 173.228 1.00 68.32 C
ATOM 7 C4' A B2533 71.810 127.727 172.303 1.00 69.94 C
ATOM 8 O4' A B2533 71.707 128.497 171.077 1.00 69.97 O
ATOM 9 C3' A B2533 72.222 126.333 171.859 1.00 70.17 C
ATOM 10 O3' A B2533 71.808 125.355 172.813 1.00 70.49 O
ATOM 11 C2' A B2533 71.510 126.193 170.519 1.00 69.89 C
ATOM 12 O2' A B2533 70.145 125.860 170.664 1.00 70.18 O
ATOM 13 C1' A B2533 71.619 127.619 169.967 1.00 69.70 C
ATOM 14 N9 A B2533 72.787 127.849 169.112 1.00 68.86 N
ATOM 15 C8 A B2533 73.921 128.570 169.411 1.00 68.73 C
ATOM 16 N7 A B2533 74.804 128.595 168.442 1.00 68.13 N
ATOM 17 C5 A B2533 74.216 127.842 167.436 1.00 67.58 C
ATOM 18 C6 A B2533 74.648 127.484 166.149 1.00 65.71 C
ATOM 19 N6 A B2533 75.819 127.851 165.634 1.00 64.52 N
ATOM 20 N1 A B2533 73.824 126.723 165.400 1.00 65.34 N
ATOM 21 C2 A B2533 72.648 126.352 165.917 1.00 66.63 C
ATOM 22 N3 A B2533 72.128 126.624 167.112 1.00 67.31 N
ATOM 23 C4 A B2533 72.972 127.380 167.833 1.00 67.91 C
ATOM 24 P C B2534 72.843 124.227 173.305 1.00 70.36 P
ATOM 25 OP1 C B2534 72.043 123.186 174.006 1.00 69.66 O
ATOM 26 OP2 C B2534 73.983 124.876 174.004 1.00 70.61 O
ATOM 27 O5' C B2534 73.404 123.598 171.957 1.00 69.66 O
TER
Atoms:
OP1: (82.259,129.271,158.592)
OP2: (83.022,130.757,160.535)
C3': (78.471,129.329,161.488)
C1': (78.740,128.270,163.571)
C5': (80.368,128.013,160.399)
O6: (81.573,131.806,167.514)
O4': (79.499,127.548,162.609)
C8: (80.886,129.581,163.914)
C2: (78.481,130.061,167.538)
C6: (80.667,131.076,167.099)
C5: (80.579,130.393,165.858)
C4: (79.461,129.630,165.596)
P: (82.567,129.439,160.034)
C4': (79.136,127.981,161.270)
C2': (77.725,129.110,162.796)
O2': (76.520,128.393,162.636)
N1: (79.547,130.844,167.890)
N2: (77.498,129.969,168.445)
N3: (78.384,129.420,166.383)
N7: (81.468,130.350,164.792)
N9: (79.659,129.117,164.331)
O5': (81.280,129.020,160.875)
O3': (77.626,129.696,160.410)
OP2: (83.022,130.757,160.535)
C3': (78.471,129.329,161.488)
C1': (78.740,128.270,163.571)
C5': (80.368,128.013,160.399)
O6: (81.573,131.806,167.514)
O4': (79.499,127.548,162.609)
C8: (80.886,129.581,163.914)
C2: (78.481,130.061,167.538)
C6: (80.667,131.076,167.099)
C5: (80.579,130.393,165.858)
C4: (79.461,129.630,165.596)
P: (82.567,129.439,160.034)
C4': (79.136,127.981,161.270)
C2': (77.725,129.110,162.796)
O2': (76.520,128.393,162.636)
N1: (79.547,130.844,167.890)
N2: (77.498,129.969,168.445)
N3: (78.384,129.420,166.383)
N7: (81.468,130.350,164.792)
N9: (79.659,129.117,164.331)
O5': (81.280,129.020,160.875)
O3': (77.626,129.696,160.410)
OP1: (75.354,128.780,174.749)
OP2: (76.512,129.096,172.478)
C3': (72.222,126.333,171.859)
C1': (71.619,127.619,169.967)
C5': (72.786,128.402,173.228)
O4': (71.707,128.497,171.077)
C8: (73.921,128.570,169.411)
O2': (70.145,125.860,170.664)
C6: (74.648,127.484,166.149)
C5: (74.216,127.842,167.436)
C4: (72.972,127.380,167.833)
P: (75.293,129.200,173.326)
C4': (71.810,127.727,172.303)
C2': (71.510,126.193,170.519)
C2: (72.648,126.352,165.917)
N1: (73.824,126.723,165.400)
N3: (72.128,126.624,167.112)
N6: (75.819,127.851,165.634)
N7: (74.804,128.595,168.442)
N9: (72.787,127.849,169.112)
O5': (74.105,128.391,172.647)
O3': (71.808,125.355,172.813)
OP2: (76.512,129.096,172.478)
C3': (72.222,126.333,171.859)
C1': (71.619,127.619,169.967)
C5': (72.786,128.402,173.228)
O4': (71.707,128.497,171.077)
C8: (73.921,128.570,169.411)
O2': (70.145,125.860,170.664)
C6: (74.648,127.484,166.149)
C5: (74.216,127.842,167.436)
C4: (72.972,127.380,167.833)
P: (75.293,129.200,173.326)
C4': (71.810,127.727,172.303)
C2': (71.510,126.193,170.519)
C2: (72.648,126.352,165.917)
N1: (73.824,126.723,165.400)
N3: (72.128,126.624,167.112)
N6: (75.819,127.851,165.634)
N7: (74.804,128.595,168.442)
N9: (72.787,127.849,169.112)
O5': (74.105,128.391,172.647)
O3': (71.808,125.355,172.813)
Image (generated by PyMOL):