ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2UUA:A584:A610

Extra

PDB:
ATOM 1 O3' U A 583 115.826 87.247 -6.611 1.00 63.21 O
ATOM 2 P G A 584 116.381 87.312 -5.111 1.00 64.56 P
ATOM 3 OP1 G A 584 116.597 85.906 -4.686 1.00 65.10 O
ATOM 4 OP2 G A 584 115.492 88.199 -4.339 1.00 63.92 O
ATOM 5 O5' G A 584 117.785 88.014 -5.250 1.00 67.59 O
ATOM 6 C5' G A 584 118.823 87.439 -6.058 1.00 73.49 C
ATOM 7 C4' G A 584 120.037 88.337 -6.058 1.00 77.78 C
ATOM 8 O4' G A 584 119.708 89.595 -6.708 1.00 80.62 O
ATOM 9 C3' G A 584 120.551 88.713 -4.674 1.00 78.82 C
ATOM 10 O3' G A 584 121.452 87.711 -4.195 1.00 77.40 O
ATOM 11 C2' G A 584 121.223 90.064 -4.922 1.00 80.97 C
ATOM 12 O2' G A 584 122.547 89.951 -5.404 1.00 81.02 O
ATOM 13 C1' G A 584 120.344 90.663 -6.030 1.00 83.49 C
ATOM 14 N9 G A 584 119.306 91.571 -5.542 1.00 88.35 N
ATOM 15 C8 G A 584 118.114 91.223 -4.944 1.00 89.86 C
ATOM 16 N7 G A 584 117.388 92.254 -4.604 1.00 91.10 N
ATOM 17 C5 G A 584 118.141 93.352 -5.000 1.00 92.15 C
ATOM 18 C6 G A 584 117.867 94.744 -4.890 1.00 93.32 C
ATOM 19 O6 G A 584 116.871 95.304 -4.402 1.00 94.49 O
ATOM 20 N1 G A 584 118.900 95.510 -5.424 1.00 93.56 N
ATOM 21 C2 G A 584 120.045 95.008 -5.992 1.00 92.93 C
ATOM 22 N2 G A 584 120.916 95.913 -6.457 1.00 92.94 N
ATOM 23 N3 G A 584 120.315 93.716 -6.099 1.00 92.52 N
ATOM 24 C4 G A 584 119.326 92.949 -5.585 1.00 91.12 C
ATOM 25 P A A 585 121.638 87.475 -2.614 1.00 76.89 P
ATOM 26 OP1 A A 585 121.331 88.760 -1.912 1.00 76.71 O
ATOM 27 OP2 A A 585 122.955 86.834 -2.422 1.00 76.36 O
ATOM 28 O5' A A 585 120.519 86.424 -2.222 1.00 75.77 O
TER

ATOM 1 O3' G B 609 123.812 99.373 -7.505 1.00112.08 O
ATOM 2 P A B 610 122.967 100.339 -8.487 1.00109.20 P
ATOM 3 OP1 A B 610 123.144 101.746 -8.005 1.00108.71 O
ATOM 4 OP2 A B 610 121.597 99.798 -8.660 1.00108.48 O
ATOM 5 O5' A B 610 123.749 100.202 -9.859 1.00104.49 O
ATOM 6 C5' A B 610 125.135 100.564 -9.946 1.00 97.14 C
ATOM 7 C4' A B 610 125.992 99.347 -10.219 1.00 91.41 C
ATOM 8 O4' A B 610 125.982 98.433 -9.089 1.00 91.07 O
ATOM 9 C3' A B 610 125.597 98.470 -11.390 1.00 87.32 C
ATOM 10 O3' A B 610 126.024 98.998 -12.619 1.00 81.06 O
ATOM 11 C2' A B 610 126.308 97.159 -11.077 1.00 88.37 C
ATOM 12 O2' A B 610 127.655 97.163 -11.489 1.00 87.62 O
ATOM 13 C1' A B 610 126.248 97.115 -9.549 1.00 90.52 C
ATOM 14 N9 A B 610 125.211 96.195 -9.066 1.00 92.80 N
ATOM 15 C8 A B 610 123.893 96.459 -8.772 1.00 93.58 C
ATOM 16 N7 A B 610 123.209 95.399 -8.408 1.00 93.63 N
ATOM 17 C5 A B 610 124.136 94.369 -8.457 1.00 93.49 C
ATOM 18 C6 A B 610 124.032 92.990 -8.197 1.00 93.90 C
ATOM 19 N6 A B 610 122.897 92.386 -7.833 1.00 94.16 N
ATOM 20 N1 A B 610 125.146 92.241 -8.333 1.00 93.89 N
ATOM 21 C2 A B 610 126.280 92.843 -8.714 1.00 93.69 C
ATOM 22 N3 A B 610 126.502 94.124 -8.996 1.00 93.01 N
ATOM 23 C4 A B 610 125.377 94.844 -8.847 1.00 92.95 C
ATOM 24 P G B 611 125.233 98.608 -13.958 1.00 76.29 P
ATOM 25 OP1 G B 611 126.054 99.079 -15.111 1.00 77.16 O
ATOM 26 OP2 G B 611 123.835 99.065 -13.838 1.00 74.80 O
ATOM 27 O5' G B 611 125.242 97.023 -13.934 1.00 72.66 O
TER

Atoms:
OP1: (116.597,85.906,-4.686)
OP2: (115.492,88.199,-4.339)
C3': (120.551,88.713,-4.674)
C1': (120.344,90.663,-6.030)
C5': (118.823,87.439,-6.058)
O6: (116.871,95.304,-4.402)
O4': (119.708,89.595,-6.708)
C8: (118.114,91.223,-4.944)
C2: (120.045,95.008,-5.992)
C6: (117.867,94.744,-4.890)
C5: (118.141,93.352,-5.000)
C4: (119.326,92.949,-5.585)
P: (116.381,87.312,-5.111)
C4': (120.037,88.337,-6.058)
C2': (121.223,90.064,-4.922)
O2': (122.547,89.951,-5.404)
N1: (118.900,95.510,-5.424)
N2: (120.916,95.913,-6.457)
N3: (120.315,93.716,-6.099)
N7: (117.388,92.254,-4.604)
N9: (119.306,91.571,-5.542)
O5': (117.785,88.014,-5.250)
O3': (121.452,87.711,-4.195)
OP1: (123.144,101.746,-8.005)
OP2: (121.597,99.798,-8.660)
C3': (125.597,98.470,-11.390)
C1': (126.248,97.115,-9.549)
C5': (125.135,100.564,-9.946)
O4': (125.982,98.433,-9.089)
C8: (123.893,96.459,-8.772)
O2': (127.655,97.163,-11.489)
C6: (124.032,92.990,-8.197)
C5: (124.136,94.369,-8.457)
C4: (125.377,94.844,-8.847)
P: (122.967,100.339,-8.487)
C4': (125.992,99.347,-10.219)
C2': (126.308,97.159,-11.077)
C2: (126.280,92.843,-8.714)
N1: (125.146,92.241,-8.333)
N3: (126.502,94.124,-8.996)
N6: (122.897,92.386,-7.833)
N7: (123.209,95.399,-8.408)
N9: (125.211,96.195,-9.066)
O5': (123.749,100.202,-9.859)
O3': (126.024,98.998,-12.619)
Image (generated by PyMOL):
PyMOL image
show in jmol