Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5B:2290:2125
Extra
PDB:
ATOM 1 O3' G A 289 -50.467 95.513 63.953 1.00102.20 O
ATOM 2 P G A 290 -50.417 94.511 65.225 1.00102.00 P
ATOM 3 OP1 G A 290 -49.075 93.863 65.223 1.00100.98 O
ATOM 4 OP2 G A 290 -51.629 93.638 65.148 1.00101.92 O
ATOM 5 O5' G A 290 -50.530 95.507 66.468 1.00102.46 O
ATOM 6 C5' G A 290 -49.570 96.533 66.671 1.00102.76 C
ATOM 7 C4' G A 290 -50.016 97.481 67.744 1.00103.40 C
ATOM 8 O4' G A 290 -51.148 98.248 67.273 1.00104.58 O
ATOM 9 C3' G A 290 -50.521 96.830 69.017 1.00102.85 C
ATOM 10 O3' G A 290 -49.481 96.473 69.889 1.00101.98 O
ATOM 11 C2' G A 290 -51.436 97.885 69.593 1.00103.92 C
ATOM 12 O2' G A 290 -50.672 98.904 70.219 1.00104.24 O
ATOM 13 C1' G A 290 -52.064 98.453 68.327 1.00104.90 C
ATOM 14 N9 G A 290 -53.336 97.779 67.988 1.00105.03 N
ATOM 15 C8 G A 290 -53.536 96.740 67.108 1.00104.55 C
ATOM 16 N7 G A 290 -54.781 96.366 67.016 1.00104.88 N
ATOM 17 C5 G A 290 -55.444 97.213 67.894 1.00105.63 C
ATOM 18 C6 G A 290 -56.822 97.299 68.237 1.00106.30 C
ATOM 19 O6 G A 290 -57.767 96.613 67.809 1.00106.36 O
ATOM 20 N1 G A 290 -57.059 98.301 69.181 1.00106.97 N
ATOM 21 C2 G A 290 -56.102 99.121 69.720 1.00107.01 C
ATOM 22 N2 G A 290 -56.513 100.029 70.615 1.00107.74 N
ATOM 23 N3 G A 290 -54.822 99.046 69.402 1.00106.39 N
ATOM 24 C4 G A 290 -54.568 98.082 68.498 1.00105.73 C
ATOM 25 P U A 291 -49.330 94.959 70.369 1.00 96.59 P
ATOM 26 OP1 U A 291 -47.899 94.620 70.227 1.00 95.81 O
ATOM 27 OP2 U A 291 -50.344 94.163 69.624 1.00 96.58 O
ATOM 28 O5' U A 291 -49.720 95.030 71.907 1.00 96.53 O
TER
ATOM 1 O3' U B 124 -60.239 102.409 77.454 1.00 95.02 O
ATOM 2 P A B 125 -60.154 103.824 76.705 1.00100.64 P
ATOM 3 OP1 A B 125 -60.659 104.846 77.659 1.00101.66 O
ATOM 4 OP2 A B 125 -60.843 103.665 75.380 1.00101.06 O
ATOM 5 O5' A B 125 -58.580 104.017 76.488 1.00100.00 O
ATOM 6 C5' A B 125 -57.770 104.499 77.552 1.00 99.86 C
ATOM 7 C4' A B 125 -56.374 104.873 77.112 1.00 99.52 C
ATOM 8 O4' A B 125 -55.730 103.738 76.500 1.00 98.33 O
ATOM 9 C3' A B 125 -56.244 106.041 76.122 1.00100.56 C
ATOM 10 O3' A B 125 -55.464 107.077 76.708 1.00101.00 O
ATOM 11 C2' A B 125 -55.480 105.449 74.926 1.00 99.85 C
ATOM 12 O2' A B 125 -54.500 106.313 74.380 1.00100.19 O
ATOM 13 C1' A B 125 -54.841 104.195 75.517 1.00 98.41 C
ATOM 14 N9 A B 125 -54.635 103.119 74.550 1.00 97.56 N
ATOM 15 C8 A B 125 -55.558 102.559 73.704 1.00 97.67 C
ATOM 16 N7 A B 125 -55.079 101.607 72.940 1.00 96.79 N
ATOM 17 C5 A B 125 -53.749 101.547 73.317 1.00 96.06 C
ATOM 18 C6 A B 125 -52.696 100.739 72.876 1.00 95.01 C
ATOM 19 N6 A B 125 -52.845 99.819 71.932 1.00 94.51 N
ATOM 20 N1 A B 125 -51.487 100.912 73.444 1.00 94.52 N
ATOM 21 C2 A B 125 -51.361 101.846 74.396 1.00 95.07 C
ATOM 22 N3 A B 125 -52.276 102.674 74.902 1.00 96.07 N
ATOM 23 C4 A B 125 -53.461 102.468 74.308 1.00 96.52 C
ATOM 24 P G B 126 -56.176 108.170 77.639 1.00106.51 P
ATOM 25 OP1 G B 126 -55.712 107.925 79.031 1.00105.93 O
ATOM 26 OP2 G B 126 -57.632 108.103 77.352 1.00107.21 O
ATOM 27 O5' G B 126 -55.579 109.543 77.094 1.00107.49 O
TER
ATOM 2 P G A 290 -50.417 94.511 65.225 1.00102.00 P
ATOM 3 OP1 G A 290 -49.075 93.863 65.223 1.00100.98 O
ATOM 4 OP2 G A 290 -51.629 93.638 65.148 1.00101.92 O
ATOM 5 O5' G A 290 -50.530 95.507 66.468 1.00102.46 O
ATOM 6 C5' G A 290 -49.570 96.533 66.671 1.00102.76 C
ATOM 7 C4' G A 290 -50.016 97.481 67.744 1.00103.40 C
ATOM 8 O4' G A 290 -51.148 98.248 67.273 1.00104.58 O
ATOM 9 C3' G A 290 -50.521 96.830 69.017 1.00102.85 C
ATOM 10 O3' G A 290 -49.481 96.473 69.889 1.00101.98 O
ATOM 11 C2' G A 290 -51.436 97.885 69.593 1.00103.92 C
ATOM 12 O2' G A 290 -50.672 98.904 70.219 1.00104.24 O
ATOM 13 C1' G A 290 -52.064 98.453 68.327 1.00104.90 C
ATOM 14 N9 G A 290 -53.336 97.779 67.988 1.00105.03 N
ATOM 15 C8 G A 290 -53.536 96.740 67.108 1.00104.55 C
ATOM 16 N7 G A 290 -54.781 96.366 67.016 1.00104.88 N
ATOM 17 C5 G A 290 -55.444 97.213 67.894 1.00105.63 C
ATOM 18 C6 G A 290 -56.822 97.299 68.237 1.00106.30 C
ATOM 19 O6 G A 290 -57.767 96.613 67.809 1.00106.36 O
ATOM 20 N1 G A 290 -57.059 98.301 69.181 1.00106.97 N
ATOM 21 C2 G A 290 -56.102 99.121 69.720 1.00107.01 C
ATOM 22 N2 G A 290 -56.513 100.029 70.615 1.00107.74 N
ATOM 23 N3 G A 290 -54.822 99.046 69.402 1.00106.39 N
ATOM 24 C4 G A 290 -54.568 98.082 68.498 1.00105.73 C
ATOM 25 P U A 291 -49.330 94.959 70.369 1.00 96.59 P
ATOM 26 OP1 U A 291 -47.899 94.620 70.227 1.00 95.81 O
ATOM 27 OP2 U A 291 -50.344 94.163 69.624 1.00 96.58 O
ATOM 28 O5' U A 291 -49.720 95.030 71.907 1.00 96.53 O
TER
ATOM 1 O3' U B 124 -60.239 102.409 77.454 1.00 95.02 O
ATOM 2 P A B 125 -60.154 103.824 76.705 1.00100.64 P
ATOM 3 OP1 A B 125 -60.659 104.846 77.659 1.00101.66 O
ATOM 4 OP2 A B 125 -60.843 103.665 75.380 1.00101.06 O
ATOM 5 O5' A B 125 -58.580 104.017 76.488 1.00100.00 O
ATOM 6 C5' A B 125 -57.770 104.499 77.552 1.00 99.86 C
ATOM 7 C4' A B 125 -56.374 104.873 77.112 1.00 99.52 C
ATOM 8 O4' A B 125 -55.730 103.738 76.500 1.00 98.33 O
ATOM 9 C3' A B 125 -56.244 106.041 76.122 1.00100.56 C
ATOM 10 O3' A B 125 -55.464 107.077 76.708 1.00101.00 O
ATOM 11 C2' A B 125 -55.480 105.449 74.926 1.00 99.85 C
ATOM 12 O2' A B 125 -54.500 106.313 74.380 1.00100.19 O
ATOM 13 C1' A B 125 -54.841 104.195 75.517 1.00 98.41 C
ATOM 14 N9 A B 125 -54.635 103.119 74.550 1.00 97.56 N
ATOM 15 C8 A B 125 -55.558 102.559 73.704 1.00 97.67 C
ATOM 16 N7 A B 125 -55.079 101.607 72.940 1.00 96.79 N
ATOM 17 C5 A B 125 -53.749 101.547 73.317 1.00 96.06 C
ATOM 18 C6 A B 125 -52.696 100.739 72.876 1.00 95.01 C
ATOM 19 N6 A B 125 -52.845 99.819 71.932 1.00 94.51 N
ATOM 20 N1 A B 125 -51.487 100.912 73.444 1.00 94.52 N
ATOM 21 C2 A B 125 -51.361 101.846 74.396 1.00 95.07 C
ATOM 22 N3 A B 125 -52.276 102.674 74.902 1.00 96.07 N
ATOM 23 C4 A B 125 -53.461 102.468 74.308 1.00 96.52 C
ATOM 24 P G B 126 -56.176 108.170 77.639 1.00106.51 P
ATOM 25 OP1 G B 126 -55.712 107.925 79.031 1.00105.93 O
ATOM 26 OP2 G B 126 -57.632 108.103 77.352 1.00107.21 O
ATOM 27 O5' G B 126 -55.579 109.543 77.094 1.00107.49 O
TER
Atoms:
OP1: (-49.075,93.863,65.223)
OP2: (-51.629,93.638,65.148)
C3': (-50.521,96.830,69.017)
C1': (-52.064,98.453,68.327)
C5': (-49.570,96.533,66.671)
O6: (-57.767,96.613,67.809)
O4': (-51.148,98.248,67.273)
C8: (-53.536,96.740,67.108)
C2: (-56.102,99.121,69.720)
C6: (-56.822,97.299,68.237)
C5: (-55.444,97.213,67.894)
C4: (-54.568,98.082,68.498)
P: (-50.417,94.511,65.225)
C4': (-50.016,97.481,67.744)
C2': (-51.436,97.885,69.593)
O2': (-50.672,98.904,70.219)
N1: (-57.059,98.301,69.181)
N2: (-56.513,100.029,70.615)
N3: (-54.822,99.046,69.402)
N7: (-54.781,96.366,67.016)
N9: (-53.336,97.779,67.988)
O5': (-50.530,95.507,66.468)
O3': (-49.481,96.473,69.889)
OP2: (-51.629,93.638,65.148)
C3': (-50.521,96.830,69.017)
C1': (-52.064,98.453,68.327)
C5': (-49.570,96.533,66.671)
O6: (-57.767,96.613,67.809)
O4': (-51.148,98.248,67.273)
C8: (-53.536,96.740,67.108)
C2: (-56.102,99.121,69.720)
C6: (-56.822,97.299,68.237)
C5: (-55.444,97.213,67.894)
C4: (-54.568,98.082,68.498)
P: (-50.417,94.511,65.225)
C4': (-50.016,97.481,67.744)
C2': (-51.436,97.885,69.593)
O2': (-50.672,98.904,70.219)
N1: (-57.059,98.301,69.181)
N2: (-56.513,100.029,70.615)
N3: (-54.822,99.046,69.402)
N7: (-54.781,96.366,67.016)
N9: (-53.336,97.779,67.988)
O5': (-50.530,95.507,66.468)
O3': (-49.481,96.473,69.889)
OP1: (-60.659,104.846,77.659)
OP2: (-60.843,103.665,75.380)
C3': (-56.244,106.041,76.122)
C1': (-54.841,104.195,75.517)
C5': (-57.770,104.499,77.552)
O4': (-55.730,103.738,76.500)
C8: (-55.558,102.559,73.704)
O2': (-54.500,106.313,74.380)
C6: (-52.696,100.739,72.876)
C5: (-53.749,101.547,73.317)
C4: (-53.461,102.468,74.308)
P: (-60.154,103.824,76.705)
C4': (-56.374,104.873,77.112)
C2': (-55.480,105.449,74.926)
C2: (-51.361,101.846,74.396)
N1: (-51.487,100.912,73.444)
N3: (-52.276,102.674,74.902)
N6: (-52.845,99.819,71.932)
N7: (-55.079,101.607,72.940)
N9: (-54.635,103.119,74.550)
O5': (-58.580,104.017,76.488)
O3': (-55.464,107.077,76.708)
OP2: (-60.843,103.665,75.380)
C3': (-56.244,106.041,76.122)
C1': (-54.841,104.195,75.517)
C5': (-57.770,104.499,77.552)
O4': (-55.730,103.738,76.500)
C8: (-55.558,102.559,73.704)
O2': (-54.500,106.313,74.380)
C6: (-52.696,100.739,72.876)
C5: (-53.749,101.547,73.317)
C4: (-53.461,102.468,74.308)
P: (-60.154,103.824,76.705)
C4': (-56.374,104.873,77.112)
C2': (-55.480,105.449,74.926)
C2: (-51.361,101.846,74.396)
N1: (-51.487,100.912,73.444)
N3: (-52.276,102.674,74.902)
N6: (-52.845,99.819,71.932)
N7: (-55.079,101.607,72.940)
N9: (-54.635,103.119,74.550)
O5': (-58.580,104.017,76.488)
O3': (-55.464,107.077,76.708)
Image (generated by PyMOL):