Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3CCL:0556:0578
Extra
PDB:
ATOM 1 O3' U A 555 4.367 93.125 108.254 1.00 47.78 O
ATOM 2 P G A 556 3.838 92.587 109.674 1.00 48.43 P
ATOM 3 OP1 G A 556 4.831 92.992 110.704 1.00 45.79 O
ATOM 4 OP2 G A 556 3.478 91.150 109.535 1.00 46.43 O
ATOM 5 O5' G A 556 2.502 93.422 109.911 1.00 47.87 O
ATOM 6 C5' G A 556 2.549 94.775 110.387 1.00 49.83 C
ATOM 7 C4' G A 556 1.152 95.280 110.652 1.00 53.03 C
ATOM 8 O4' G A 556 0.451 95.451 109.391 1.00 54.24 O
ATOM 9 C3' G A 556 0.248 94.344 111.440 1.00 54.86 C
ATOM 10 O3' G A 556 0.471 94.407 112.841 1.00 58.13 O
ATOM 11 C2' G A 556 -1.133 94.844 111.051 1.00 54.21 C
ATOM 12 O2' G A 556 -1.479 96.039 111.717 1.00 54.55 O
ATOM 13 C1' G A 556 -0.923 95.142 109.568 1.00 53.31 C
ATOM 14 N9 G A 556 -1.243 93.980 108.747 1.00 52.29 N
ATOM 15 C8 G A 556 -0.391 92.985 108.331 1.00 51.19 C
ATOM 16 N7 G A 556 -0.984 92.070 107.614 1.00 50.76 N
ATOM 17 C5 G A 556 -2.306 92.487 107.556 1.00 52.49 C
ATOM 18 C6 G A 556 -3.429 91.897 106.922 1.00 52.85 C
ATOM 19 O6 G A 556 -3.480 90.857 106.267 1.00 54.48 O
ATOM 20 N1 G A 556 -4.581 92.653 107.114 1.00 53.51 N
ATOM 21 C2 G A 556 -4.646 93.828 107.826 1.00 53.99 C
ATOM 22 N2 G A 556 -5.847 94.414 107.896 1.00 54.61 N
ATOM 23 N3 G A 556 -3.608 94.386 108.424 1.00 53.32 N
ATOM 24 C4 G A 556 -2.479 93.666 108.248 1.00 52.92 C
ATOM 25 P A A 557 -0.008 93.189 113.781 1.00 61.10 P
ATOM 26 OP1 A A 557 0.698 93.369 115.071 1.00 60.60 O
ATOM 27 OP2 A A 557 0.075 91.879 113.069 1.00 58.54 O
ATOM 28 O5' A A 557 -1.546 93.495 114.024 1.00 61.98 O
TER
ATOM 1 O3' U B 577 -11.799 94.093 107.231 1.00 64.54 O
ATOM 2 P A B 578 -11.347 95.368 106.370 1.00 66.37 P
ATOM 3 OP1 A B 578 -12.468 95.811 105.510 1.00 66.58 O
ATOM 4 OP2 A B 578 -10.037 95.046 105.747 1.00 68.52 O
ATOM 5 O5' A B 578 -11.110 96.478 107.481 1.00 64.62 O
ATOM 6 C5' A B 578 -12.200 97.000 108.237 1.00 62.96 C
ATOM 7 C4' A B 578 -11.693 98.021 109.211 1.00 64.42 C
ATOM 8 O4' A B 578 -10.876 97.354 110.205 1.00 64.86 O
ATOM 9 C3' A B 578 -10.740 99.039 108.620 1.00 66.36 C
ATOM 10 O3' A B 578 -11.373 100.080 107.905 1.00 69.81 O
ATOM 11 C2' A B 578 -9.985 99.528 109.845 1.00 66.20 C
ATOM 12 O2' A B 578 -10.687 100.488 110.609 1.00 65.03 O
ATOM 13 C1' A B 578 -9.827 98.222 110.621 1.00 64.42 C
ATOM 14 N9 A B 578 -8.550 97.577 110.326 1.00 61.89 N
ATOM 15 C8 A B 578 -8.320 96.437 109.602 1.00 61.40 C
ATOM 16 N7 A B 578 -7.055 96.108 109.524 1.00 60.91 N
ATOM 17 C5 A B 578 -6.410 97.099 110.247 1.00 60.54 C
ATOM 18 C6 A B 578 -5.059 97.313 110.555 1.00 60.72 C
ATOM 19 N6 A B 578 -4.074 96.503 110.161 1.00 61.15 N
ATOM 20 N1 A B 578 -4.748 98.398 111.295 1.00 60.59 N
ATOM 21 C2 A B 578 -5.741 99.205 111.695 1.00 60.43 C
ATOM 22 N3 A B 578 -7.047 99.104 111.474 1.00 59.84 N
ATOM 23 C4 A B 578 -7.318 98.015 110.738 1.00 60.40 C
ATOM 24 P A B 579 -10.753 100.543 106.501 1.00 73.15 P
ATOM 25 OP1 A B 579 -11.409 101.815 106.097 1.00 73.81 O
ATOM 26 OP2 A B 579 -10.797 99.363 105.588 1.00 72.25 O
ATOM 27 O5' A B 579 -9.234 100.871 106.856 1.00 70.43 O
TER
ATOM 2 P G A 556 3.838 92.587 109.674 1.00 48.43 P
ATOM 3 OP1 G A 556 4.831 92.992 110.704 1.00 45.79 O
ATOM 4 OP2 G A 556 3.478 91.150 109.535 1.00 46.43 O
ATOM 5 O5' G A 556 2.502 93.422 109.911 1.00 47.87 O
ATOM 6 C5' G A 556 2.549 94.775 110.387 1.00 49.83 C
ATOM 7 C4' G A 556 1.152 95.280 110.652 1.00 53.03 C
ATOM 8 O4' G A 556 0.451 95.451 109.391 1.00 54.24 O
ATOM 9 C3' G A 556 0.248 94.344 111.440 1.00 54.86 C
ATOM 10 O3' G A 556 0.471 94.407 112.841 1.00 58.13 O
ATOM 11 C2' G A 556 -1.133 94.844 111.051 1.00 54.21 C
ATOM 12 O2' G A 556 -1.479 96.039 111.717 1.00 54.55 O
ATOM 13 C1' G A 556 -0.923 95.142 109.568 1.00 53.31 C
ATOM 14 N9 G A 556 -1.243 93.980 108.747 1.00 52.29 N
ATOM 15 C8 G A 556 -0.391 92.985 108.331 1.00 51.19 C
ATOM 16 N7 G A 556 -0.984 92.070 107.614 1.00 50.76 N
ATOM 17 C5 G A 556 -2.306 92.487 107.556 1.00 52.49 C
ATOM 18 C6 G A 556 -3.429 91.897 106.922 1.00 52.85 C
ATOM 19 O6 G A 556 -3.480 90.857 106.267 1.00 54.48 O
ATOM 20 N1 G A 556 -4.581 92.653 107.114 1.00 53.51 N
ATOM 21 C2 G A 556 -4.646 93.828 107.826 1.00 53.99 C
ATOM 22 N2 G A 556 -5.847 94.414 107.896 1.00 54.61 N
ATOM 23 N3 G A 556 -3.608 94.386 108.424 1.00 53.32 N
ATOM 24 C4 G A 556 -2.479 93.666 108.248 1.00 52.92 C
ATOM 25 P A A 557 -0.008 93.189 113.781 1.00 61.10 P
ATOM 26 OP1 A A 557 0.698 93.369 115.071 1.00 60.60 O
ATOM 27 OP2 A A 557 0.075 91.879 113.069 1.00 58.54 O
ATOM 28 O5' A A 557 -1.546 93.495 114.024 1.00 61.98 O
TER
ATOM 1 O3' U B 577 -11.799 94.093 107.231 1.00 64.54 O
ATOM 2 P A B 578 -11.347 95.368 106.370 1.00 66.37 P
ATOM 3 OP1 A B 578 -12.468 95.811 105.510 1.00 66.58 O
ATOM 4 OP2 A B 578 -10.037 95.046 105.747 1.00 68.52 O
ATOM 5 O5' A B 578 -11.110 96.478 107.481 1.00 64.62 O
ATOM 6 C5' A B 578 -12.200 97.000 108.237 1.00 62.96 C
ATOM 7 C4' A B 578 -11.693 98.021 109.211 1.00 64.42 C
ATOM 8 O4' A B 578 -10.876 97.354 110.205 1.00 64.86 O
ATOM 9 C3' A B 578 -10.740 99.039 108.620 1.00 66.36 C
ATOM 10 O3' A B 578 -11.373 100.080 107.905 1.00 69.81 O
ATOM 11 C2' A B 578 -9.985 99.528 109.845 1.00 66.20 C
ATOM 12 O2' A B 578 -10.687 100.488 110.609 1.00 65.03 O
ATOM 13 C1' A B 578 -9.827 98.222 110.621 1.00 64.42 C
ATOM 14 N9 A B 578 -8.550 97.577 110.326 1.00 61.89 N
ATOM 15 C8 A B 578 -8.320 96.437 109.602 1.00 61.40 C
ATOM 16 N7 A B 578 -7.055 96.108 109.524 1.00 60.91 N
ATOM 17 C5 A B 578 -6.410 97.099 110.247 1.00 60.54 C
ATOM 18 C6 A B 578 -5.059 97.313 110.555 1.00 60.72 C
ATOM 19 N6 A B 578 -4.074 96.503 110.161 1.00 61.15 N
ATOM 20 N1 A B 578 -4.748 98.398 111.295 1.00 60.59 N
ATOM 21 C2 A B 578 -5.741 99.205 111.695 1.00 60.43 C
ATOM 22 N3 A B 578 -7.047 99.104 111.474 1.00 59.84 N
ATOM 23 C4 A B 578 -7.318 98.015 110.738 1.00 60.40 C
ATOM 24 P A B 579 -10.753 100.543 106.501 1.00 73.15 P
ATOM 25 OP1 A B 579 -11.409 101.815 106.097 1.00 73.81 O
ATOM 26 OP2 A B 579 -10.797 99.363 105.588 1.00 72.25 O
ATOM 27 O5' A B 579 -9.234 100.871 106.856 1.00 70.43 O
TER
Atoms:
OP1: (4.831,92.992,110.704)
OP2: (3.478,91.150,109.535)
C3': (0.248,94.344,111.440)
C1': (-0.923,95.142,109.568)
C5': (2.549,94.775,110.387)
O6: (-3.480,90.857,106.267)
O4': (0.451,95.451,109.391)
C8: (-0.391,92.985,108.331)
C2: (-4.646,93.828,107.826)
C6: (-3.429,91.897,106.922)
C5: (-2.306,92.487,107.556)
C4: (-2.479,93.666,108.248)
P: (3.838,92.587,109.674)
C4': (1.152,95.280,110.652)
C2': (-1.133,94.844,111.051)
O2': (-1.479,96.039,111.717)
N1: (-4.581,92.653,107.114)
N2: (-5.847,94.414,107.896)
N3: (-3.608,94.386,108.424)
N7: (-0.984,92.070,107.614)
N9: (-1.243,93.980,108.747)
O5': (2.502,93.422,109.911)
O3': (0.471,94.407,112.841)
OP2: (3.478,91.150,109.535)
C3': (0.248,94.344,111.440)
C1': (-0.923,95.142,109.568)
C5': (2.549,94.775,110.387)
O6: (-3.480,90.857,106.267)
O4': (0.451,95.451,109.391)
C8: (-0.391,92.985,108.331)
C2: (-4.646,93.828,107.826)
C6: (-3.429,91.897,106.922)
C5: (-2.306,92.487,107.556)
C4: (-2.479,93.666,108.248)
P: (3.838,92.587,109.674)
C4': (1.152,95.280,110.652)
C2': (-1.133,94.844,111.051)
O2': (-1.479,96.039,111.717)
N1: (-4.581,92.653,107.114)
N2: (-5.847,94.414,107.896)
N3: (-3.608,94.386,108.424)
N7: (-0.984,92.070,107.614)
N9: (-1.243,93.980,108.747)
O5': (2.502,93.422,109.911)
O3': (0.471,94.407,112.841)
OP1: (-12.468,95.811,105.510)
OP2: (-10.037,95.046,105.747)
C3': (-10.740,99.039,108.620)
C1': (-9.827,98.222,110.621)
C5': (-12.200,97.000,108.237)
O4': (-10.876,97.354,110.205)
C8: (-8.320,96.437,109.602)
O2': (-10.687,100.488,110.609)
C6: (-5.059,97.313,110.555)
C5: (-6.410,97.099,110.247)
C4: (-7.318,98.015,110.738)
P: (-11.347,95.368,106.370)
C4': (-11.693,98.021,109.211)
C2': (-9.985,99.528,109.845)
C2: (-5.741,99.205,111.695)
N1: (-4.748,98.398,111.295)
N3: (-7.047,99.104,111.474)
N6: (-4.074,96.503,110.161)
N7: (-7.055,96.108,109.524)
N9: (-8.550,97.577,110.326)
O5': (-11.110,96.478,107.481)
O3': (-11.373,100.080,107.905)
OP2: (-10.037,95.046,105.747)
C3': (-10.740,99.039,108.620)
C1': (-9.827,98.222,110.621)
C5': (-12.200,97.000,108.237)
O4': (-10.876,97.354,110.205)
C8: (-8.320,96.437,109.602)
O2': (-10.687,100.488,110.609)
C6: (-5.059,97.313,110.555)
C5: (-6.410,97.099,110.247)
C4: (-7.318,98.015,110.738)
P: (-11.347,95.368,106.370)
C4': (-11.693,98.021,109.211)
C2': (-9.985,99.528,109.845)
C2: (-5.741,99.205,111.695)
N1: (-4.748,98.398,111.295)
N3: (-7.047,99.104,111.474)
N6: (-4.074,96.503,110.161)
N7: (-7.055,96.108,109.524)
N9: (-8.550,97.577,110.326)
O5': (-11.110,96.478,107.481)
O3': (-11.373,100.080,107.905)
Image (generated by PyMOL):