Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQN:013:0508
Extra
PDB:
ATOM 1 O3' U A 12 34.034 147.659 73.935 1.00 40.55 O
ATOM 2 P G A 13 34.447 147.250 72.442 1.00 37.99 P
ATOM 3 OP1 G A 13 35.841 147.688 72.235 1.00 42.31 O
ATOM 4 OP2 G A 13 33.394 147.705 71.514 1.00 40.37 O
ATOM 5 O5' G A 13 34.426 145.662 72.447 1.00 41.20 O
ATOM 6 C5' G A 13 35.419 144.897 73.142 1.00 39.04 C
ATOM 7 C4' G A 13 35.048 143.438 73.096 1.00 40.35 C
ATOM 8 O4' G A 13 33.760 143.255 73.745 1.00 41.61 O
ATOM 9 C3' G A 13 34.840 142.890 71.697 1.00 39.32 C
ATOM 10 O3' G A 13 36.084 142.497 71.140 1.00 38.50 O
ATOM 11 C2' G A 13 33.883 141.729 71.936 1.00 38.66 C
ATOM 12 O2' G A 13 34.531 140.612 72.497 1.00 38.81 O
ATOM 13 C1' G A 13 32.987 142.309 73.028 1.00 39.79 C
ATOM 14 N9 G A 13 31.789 142.993 72.557 1.00 40.49 N
ATOM 15 C8 G A 13 31.713 144.269 72.053 1.00 39.20 C
ATOM 16 N7 G A 13 30.494 144.640 71.781 1.00 38.41 N
ATOM 17 C5 G A 13 29.716 143.539 72.106 1.00 38.33 C
ATOM 18 C6 G A 13 28.312 143.356 72.023 1.00 36.64 C
ATOM 19 O6 G A 13 27.458 144.173 71.662 1.00 34.39 O
ATOM 20 N1 G A 13 27.934 142.073 72.426 1.00 35.77 N
ATOM 21 C2 G A 13 28.803 141.098 72.868 1.00 39.55 C
ATOM 22 N2 G A 13 28.264 139.919 73.202 1.00 38.01 N
ATOM 23 N3 G A 13 30.117 141.267 72.969 1.00 39.86 N
ATOM 24 C4 G A 13 30.500 142.504 72.570 1.00 40.56 C
ATOM 25 P G A 14 36.388 142.786 69.587 1.00 36.73 P
ATOM 26 OP1 G A 14 37.855 142.701 69.372 1.00 37.13 O
ATOM 27 OP2 G A 14 35.665 144.023 69.219 1.00 36.78 O
ATOM 28 O5' G A 14 35.716 141.555 68.841 1.00 35.42 O
TER
ATOM 1 O3' A B 507 24.355 135.789 74.587 1.00 38.79 O
ATOM 2 P A B 508 24.689 136.475 75.995 1.00 40.50 P
ATOM 3 OP1 A B 508 23.553 136.126 76.876 1.00 41.35 O
ATOM 4 OP2 A B 508 25.036 137.908 75.783 1.00 39.91 O
ATOM 5 O5' A B 508 26.008 135.717 76.478 1.00 38.61 O
ATOM 6 C5' A B 508 26.016 134.295 76.714 1.00 36.82 C
ATOM 7 C4' A B 508 27.421 133.828 77.024 1.00 38.84 C
ATOM 8 O4' A B 508 28.256 134.033 75.852 1.00 39.28 O
ATOM 9 C3' A B 508 28.152 134.583 78.124 1.00 38.49 C
ATOM 10 O3' A B 508 27.801 134.113 79.419 1.00 35.66 O
ATOM 11 C2' A B 508 29.614 134.314 77.783 1.00 40.31 C
ATOM 12 O2' A B 508 30.069 133.039 78.192 1.00 44.58 O
ATOM 13 C1' A B 508 29.578 134.344 76.253 1.00 38.87 C
ATOM 14 N9 A B 508 29.956 135.631 75.662 1.00 37.44 N
ATOM 15 C8 A B 508 29.149 136.680 75.306 1.00 35.19 C
ATOM 16 N7 A B 508 29.794 137.686 74.772 1.00 35.74 N
ATOM 17 C5 A B 508 31.120 137.276 74.783 1.00 36.79 C
ATOM 18 C6 A B 508 32.317 137.894 74.347 1.00 37.01 C
ATOM 19 N6 A B 508 32.372 139.100 73.772 1.00 34.81 N
ATOM 20 N1 A B 508 33.471 137.212 74.521 1.00 35.53 N
ATOM 21 C2 A B 508 33.421 136.002 75.080 1.00 34.77 C
ATOM 22 N3 A B 508 32.366 135.317 75.519 1.00 35.30 N
ATOM 23 C4 A B 508 31.235 136.017 75.340 1.00 35.74 C
ATOM 24 P A B 509 27.871 135.111 80.681 1.00 33.74 P
ATOM 25 OP1 A B 509 27.418 134.323 81.843 1.00 36.19 O
ATOM 26 OP2 A B 509 27.191 136.381 80.356 1.00 35.98 O
ATOM 27 O5' A B 509 29.425 135.416 80.854 1.00 35.70 O
TER
ATOM 2 P G A 13 34.447 147.250 72.442 1.00 37.99 P
ATOM 3 OP1 G A 13 35.841 147.688 72.235 1.00 42.31 O
ATOM 4 OP2 G A 13 33.394 147.705 71.514 1.00 40.37 O
ATOM 5 O5' G A 13 34.426 145.662 72.447 1.00 41.20 O
ATOM 6 C5' G A 13 35.419 144.897 73.142 1.00 39.04 C
ATOM 7 C4' G A 13 35.048 143.438 73.096 1.00 40.35 C
ATOM 8 O4' G A 13 33.760 143.255 73.745 1.00 41.61 O
ATOM 9 C3' G A 13 34.840 142.890 71.697 1.00 39.32 C
ATOM 10 O3' G A 13 36.084 142.497 71.140 1.00 38.50 O
ATOM 11 C2' G A 13 33.883 141.729 71.936 1.00 38.66 C
ATOM 12 O2' G A 13 34.531 140.612 72.497 1.00 38.81 O
ATOM 13 C1' G A 13 32.987 142.309 73.028 1.00 39.79 C
ATOM 14 N9 G A 13 31.789 142.993 72.557 1.00 40.49 N
ATOM 15 C8 G A 13 31.713 144.269 72.053 1.00 39.20 C
ATOM 16 N7 G A 13 30.494 144.640 71.781 1.00 38.41 N
ATOM 17 C5 G A 13 29.716 143.539 72.106 1.00 38.33 C
ATOM 18 C6 G A 13 28.312 143.356 72.023 1.00 36.64 C
ATOM 19 O6 G A 13 27.458 144.173 71.662 1.00 34.39 O
ATOM 20 N1 G A 13 27.934 142.073 72.426 1.00 35.77 N
ATOM 21 C2 G A 13 28.803 141.098 72.868 1.00 39.55 C
ATOM 22 N2 G A 13 28.264 139.919 73.202 1.00 38.01 N
ATOM 23 N3 G A 13 30.117 141.267 72.969 1.00 39.86 N
ATOM 24 C4 G A 13 30.500 142.504 72.570 1.00 40.56 C
ATOM 25 P G A 14 36.388 142.786 69.587 1.00 36.73 P
ATOM 26 OP1 G A 14 37.855 142.701 69.372 1.00 37.13 O
ATOM 27 OP2 G A 14 35.665 144.023 69.219 1.00 36.78 O
ATOM 28 O5' G A 14 35.716 141.555 68.841 1.00 35.42 O
TER
ATOM 1 O3' A B 507 24.355 135.789 74.587 1.00 38.79 O
ATOM 2 P A B 508 24.689 136.475 75.995 1.00 40.50 P
ATOM 3 OP1 A B 508 23.553 136.126 76.876 1.00 41.35 O
ATOM 4 OP2 A B 508 25.036 137.908 75.783 1.00 39.91 O
ATOM 5 O5' A B 508 26.008 135.717 76.478 1.00 38.61 O
ATOM 6 C5' A B 508 26.016 134.295 76.714 1.00 36.82 C
ATOM 7 C4' A B 508 27.421 133.828 77.024 1.00 38.84 C
ATOM 8 O4' A B 508 28.256 134.033 75.852 1.00 39.28 O
ATOM 9 C3' A B 508 28.152 134.583 78.124 1.00 38.49 C
ATOM 10 O3' A B 508 27.801 134.113 79.419 1.00 35.66 O
ATOM 11 C2' A B 508 29.614 134.314 77.783 1.00 40.31 C
ATOM 12 O2' A B 508 30.069 133.039 78.192 1.00 44.58 O
ATOM 13 C1' A B 508 29.578 134.344 76.253 1.00 38.87 C
ATOM 14 N9 A B 508 29.956 135.631 75.662 1.00 37.44 N
ATOM 15 C8 A B 508 29.149 136.680 75.306 1.00 35.19 C
ATOM 16 N7 A B 508 29.794 137.686 74.772 1.00 35.74 N
ATOM 17 C5 A B 508 31.120 137.276 74.783 1.00 36.79 C
ATOM 18 C6 A B 508 32.317 137.894 74.347 1.00 37.01 C
ATOM 19 N6 A B 508 32.372 139.100 73.772 1.00 34.81 N
ATOM 20 N1 A B 508 33.471 137.212 74.521 1.00 35.53 N
ATOM 21 C2 A B 508 33.421 136.002 75.080 1.00 34.77 C
ATOM 22 N3 A B 508 32.366 135.317 75.519 1.00 35.30 N
ATOM 23 C4 A B 508 31.235 136.017 75.340 1.00 35.74 C
ATOM 24 P A B 509 27.871 135.111 80.681 1.00 33.74 P
ATOM 25 OP1 A B 509 27.418 134.323 81.843 1.00 36.19 O
ATOM 26 OP2 A B 509 27.191 136.381 80.356 1.00 35.98 O
ATOM 27 O5' A B 509 29.425 135.416 80.854 1.00 35.70 O
TER
Atoms:
OP1: (35.841,147.688,72.235)
OP2: (33.394,147.705,71.514)
C3': (34.840,142.890,71.697)
C1': (32.987,142.309,73.028)
C5': (35.419,144.897,73.142)
O6: (27.458,144.173,71.662)
O4': (33.760,143.255,73.745)
C8: (31.713,144.269,72.053)
C2: (28.803,141.098,72.868)
C6: (28.312,143.356,72.023)
C5: (29.716,143.539,72.106)
C4: (30.500,142.504,72.570)
P: (34.447,147.250,72.442)
C4': (35.048,143.438,73.096)
C2': (33.883,141.729,71.936)
O2': (34.531,140.612,72.497)
N1: (27.934,142.073,72.426)
N2: (28.264,139.919,73.202)
N3: (30.117,141.267,72.969)
N7: (30.494,144.640,71.781)
N9: (31.789,142.993,72.557)
O5': (34.426,145.662,72.447)
O3': (36.084,142.497,71.140)
OP2: (33.394,147.705,71.514)
C3': (34.840,142.890,71.697)
C1': (32.987,142.309,73.028)
C5': (35.419,144.897,73.142)
O6: (27.458,144.173,71.662)
O4': (33.760,143.255,73.745)
C8: (31.713,144.269,72.053)
C2: (28.803,141.098,72.868)
C6: (28.312,143.356,72.023)
C5: (29.716,143.539,72.106)
C4: (30.500,142.504,72.570)
P: (34.447,147.250,72.442)
C4': (35.048,143.438,73.096)
C2': (33.883,141.729,71.936)
O2': (34.531,140.612,72.497)
N1: (27.934,142.073,72.426)
N2: (28.264,139.919,73.202)
N3: (30.117,141.267,72.969)
N7: (30.494,144.640,71.781)
N9: (31.789,142.993,72.557)
O5': (34.426,145.662,72.447)
O3': (36.084,142.497,71.140)
OP1: (23.553,136.126,76.876)
OP2: (25.036,137.908,75.783)
C3': (28.152,134.583,78.124)
C1': (29.578,134.344,76.253)
C5': (26.016,134.295,76.714)
O4': (28.256,134.033,75.852)
C8: (29.149,136.680,75.306)
O2': (30.069,133.039,78.192)
C6: (32.317,137.894,74.347)
C5: (31.120,137.276,74.783)
C4: (31.235,136.017,75.340)
P: (24.689,136.475,75.995)
C4': (27.421,133.828,77.024)
C2': (29.614,134.314,77.783)
C2: (33.421,136.002,75.080)
N1: (33.471,137.212,74.521)
N3: (32.366,135.317,75.519)
N6: (32.372,139.100,73.772)
N7: (29.794,137.686,74.772)
N9: (29.956,135.631,75.662)
O5': (26.008,135.717,76.478)
O3': (27.801,134.113,79.419)
OP2: (25.036,137.908,75.783)
C3': (28.152,134.583,78.124)
C1': (29.578,134.344,76.253)
C5': (26.016,134.295,76.714)
O4': (28.256,134.033,75.852)
C8: (29.149,136.680,75.306)
O2': (30.069,133.039,78.192)
C6: (32.317,137.894,74.347)
C5: (31.120,137.276,74.783)
C4: (31.235,136.017,75.340)
P: (24.689,136.475,75.995)
C4': (27.421,133.828,77.024)
C2': (29.614,134.314,77.783)
C2: (33.421,136.002,75.080)
N1: (33.471,137.212,74.521)
N3: (32.366,135.317,75.519)
N6: (32.372,139.100,73.772)
N7: (29.794,137.686,74.772)
N9: (29.956,135.631,75.662)
O5': (26.008,135.717,76.478)
O3': (27.801,134.113,79.419)
Image (generated by PyMOL):