ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1Q82:A280:A348

Extra

PDB:
ATOM 1 O3' C A 279 55.621 129.432 -1.486 1.00 82.58 O
ATOM 2 P G A 280 55.036 130.294 -0.261 1.00 82.74 P
ATOM 3 OP1 G A 280 54.015 131.233 -0.821 1.00 83.07 O
ATOM 4 OP2 G A 280 56.187 130.835 0.512 1.00 82.67 O
ATOM 5 O5' G A 280 54.233 129.220 0.602 1.00 82.38 O
ATOM 6 C5' G A 280 53.046 128.586 0.064 1.00 80.64 C
ATOM 7 C4' G A 280 52.672 127.375 0.886 1.00 79.61 C
ATOM 8 O4' G A 280 53.709 126.356 0.787 1.00 78.96 O
ATOM 9 C3' G A 280 52.546 127.635 2.373 1.00 78.98 C
ATOM 10 O3' G A 280 51.301 128.237 2.726 1.00 79.81 O
ATOM 11 C2' G A 280 52.766 126.249 2.962 1.00 77.54 C
ATOM 12 O2' G A 280 51.625 125.420 2.881 1.00 77.57 O
ATOM 13 C1' G A 280 53.874 125.716 2.047 1.00 76.53 C
ATOM 14 N9 G A 280 55.194 126.069 2.560 1.00 73.51 N
ATOM 15 C8 G A 280 55.870 127.245 2.337 1.00 72.32 C
ATOM 16 N7 G A 280 57.002 127.315 2.976 1.00 72.10 N
ATOM 17 C5 G A 280 57.085 126.109 3.657 1.00 71.88 C
ATOM 18 C6 G A 280 58.086 125.621 4.530 1.00 71.48 C
ATOM 19 O6 G A 280 59.119 126.185 4.902 1.00 70.72 O
ATOM 20 N1 G A 280 57.786 124.341 4.985 1.00 71.07 N
ATOM 21 C2 G A 280 56.660 123.628 4.648 1.00 71.31 C
ATOM 22 N2 G A 280 56.551 122.413 5.181 1.00 71.61 N
ATOM 23 N3 G A 280 55.712 124.076 3.846 1.00 71.35 N
ATOM 24 C4 G A 280 55.987 125.316 3.390 1.00 72.23 C
ATOM 25 P A A 281 51.170 129.003 4.138 1.00 80.92 P
ATOM 26 OP1 A A 281 49.936 129.854 4.141 1.00 79.55 O
ATOM 27 OP2 A A 281 52.504 129.644 4.408 1.00 81.09 O
ATOM 28 O5' A A 281 50.977 127.795 5.160 1.00 79.33 O
TER

ATOM 1 O3' U B 347 57.759 118.075 8.703 1.00 82.10 O
ATOM 2 P A B 348 57.743 117.290 7.301 1.00 83.71 P
ATOM 3 OP1 A B 348 58.287 115.931 7.605 1.00 84.09 O
ATOM 4 OP2 A B 348 58.384 118.116 6.234 1.00 83.19 O
ATOM 5 O5' A B 348 56.192 117.116 6.980 1.00 84.00 O
ATOM 6 C5' A B 348 55.432 116.067 7.618 1.00 85.11 C
ATOM 7 C4' A B 348 54.039 116.012 7.052 1.00 86.04 C
ATOM 8 O4' A B 348 53.386 117.282 7.303 1.00 85.79 O
ATOM 9 C3' A B 348 53.951 115.841 5.545 1.00 87.02 C
ATOM 10 O3' A B 348 54.076 114.478 5.157 1.00 89.90 O
ATOM 11 C2' A B 348 52.576 116.422 5.236 1.00 86.27 C
ATOM 12 O2' A B 348 51.510 115.531 5.516 1.00 85.60 O
ATOM 13 C1' A B 348 52.526 117.592 6.222 1.00 85.26 C
ATOM 14 N9 A B 348 52.938 118.872 5.649 1.00 83.94 N
ATOM 15 C8 A B 348 54.117 119.568 5.796 1.00 83.31 C
ATOM 16 N7 A B 348 54.129 120.719 5.170 1.00 82.91 N
ATOM 17 C5 A B 348 52.879 120.781 4.564 1.00 83.64 C
ATOM 18 C6 A B 348 52.257 121.761 3.761 1.00 83.71 C
ATOM 19 N6 A B 348 52.832 122.927 3.432 1.00 83.41 N
ATOM 20 N1 A B 348 51.007 121.500 3.309 1.00 83.33 N
ATOM 21 C2 A B 348 50.427 120.335 3.653 1.00 82.86 C
ATOM 22 N3 A B 348 50.904 119.349 4.409 1.00 82.50 N
ATOM 23 C4 A B 348 52.146 119.640 4.838 1.00 83.35 C
ATOM 24 P C B 349 54.693 114.120 3.718 1.00 91.97 P
ATOM 25 OP1 C B 349 54.581 112.649 3.540 1.00 92.18 O
ATOM 26 OP2 C B 349 56.017 114.775 3.593 1.00 91.66 O
ATOM 27 O5' C B 349 53.704 114.833 2.692 1.00 93.05 O
TER

Atoms:
OP1: (54.015,131.233,-0.821)
OP2: (56.187,130.835,0.512)
C3': (52.546,127.635,2.373)
C1': (53.874,125.716,2.047)
C5': (53.046,128.586,0.064)
O6: (59.119,126.185,4.902)
O4': (53.709,126.356,0.787)
C8: (55.870,127.245,2.337)
C2: (56.660,123.628,4.648)
C6: (58.086,125.621,4.530)
C5: (57.085,126.109,3.657)
C4: (55.987,125.316,3.390)
P: (55.036,130.294,-0.261)
C4': (52.672,127.375,0.886)
C2': (52.766,126.249,2.962)
O2': (51.625,125.420,2.881)
N1: (57.786,124.341,4.985)
N2: (56.551,122.413,5.181)
N3: (55.712,124.076,3.846)
N7: (57.002,127.315,2.976)
N9: (55.194,126.069,2.560)
O5': (54.233,129.220,0.602)
O3': (51.301,128.237,2.726)
OP1: (58.287,115.931,7.605)
OP2: (58.384,118.116,6.234)
C3': (53.951,115.841,5.545)
C1': (52.526,117.592,6.222)
C5': (55.432,116.067,7.618)
O4': (53.386,117.282,7.303)
C8: (54.117,119.568,5.796)
O2': (51.510,115.531,5.516)
C6: (52.257,121.761,3.761)
C5: (52.879,120.781,4.564)
C4: (52.146,119.640,4.838)
P: (57.743,117.290,7.301)
C4': (54.039,116.012,7.052)
C2': (52.576,116.422,5.236)
C2: (50.427,120.335,3.653)
N1: (51.007,121.500,3.309)
N3: (50.904,119.349,4.409)
N6: (52.832,122.927,3.432)
N7: (54.129,120.719,5.170)
N9: (52.938,118.872,5.649)
O5': (56.192,117.116,6.980)
O3': (54.076,114.478,5.157)
Image (generated by PyMOL):
PyMOL image
show in jmol