Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:1800:1781
Extra
PDB:
ATOM 1 O3' U A 799 -14.304 41.444 116.867 1.00 57.60 O
ATOM 2 P G A 800 -12.789 41.314 116.337 1.00 60.28 P
ATOM 3 OP1 G A 800 -11.919 42.000 117.329 1.00 60.62 O
ATOM 4 OP2 G A 800 -12.761 41.786 114.921 1.00 60.02 O
ATOM 5 O5' G A 800 -12.528 39.746 116.382 1.00 59.69 O
ATOM 6 C5' G A 800 -12.432 39.062 117.614 1.00 59.81 C
ATOM 7 C4' G A 800 -12.749 37.611 117.441 1.00 59.34 C
ATOM 8 O4' G A 800 -13.963 37.485 116.676 1.00 59.36 O
ATOM 9 C3' G A 800 -11.711 36.778 116.684 1.00 58.61 C
ATOM 10 O3' G A 800 -10.712 36.252 117.558 1.00 58.48 O
ATOM 11 C2' G A 800 -12.553 35.678 116.030 1.00 58.25 C
ATOM 12 O2' G A 800 -12.742 34.601 116.937 1.00 58.23 O
ATOM 13 C1' G A 800 -13.907 36.362 115.832 1.00 58.73 C
ATOM 14 N9 G A 800 -14.148 36.810 114.449 1.00 58.53 N
ATOM 15 C8 G A 800 -13.995 38.097 114.015 1.00 58.79 C
ATOM 16 N7 G A 800 -14.314 38.260 112.771 1.00 58.58 N
ATOM 17 C5 G A 800 -14.742 36.995 112.362 1.00 58.16 C
ATOM 18 C6 G A 800 -15.227 36.552 111.094 1.00 57.80 C
ATOM 19 O6 G A 800 -15.367 37.224 110.056 1.00 57.78 O
ATOM 20 N1 G A 800 -15.536 35.180 111.115 1.00 57.45 N
ATOM 21 C2 G A 800 -15.408 34.346 112.214 1.00 57.45 C
ATOM 22 N2 G A 800 -15.746 33.057 112.075 1.00 57.10 N
ATOM 23 N3 G A 800 -14.964 34.775 113.390 1.00 57.79 N
ATOM 24 C4 G A 800 -14.649 36.092 113.397 1.00 58.13 C
ATOM 25 P G A 801 -9.178 36.697 117.432 1.00 53.57 P
ATOM 26 OP1 G A 801 -8.582 36.636 118.789 1.00 53.84 O
ATOM 27 OP2 G A 801 -9.163 37.976 116.707 1.00 53.76 O
ATOM 28 O5' G A 801 -8.551 35.562 116.525 1.00 52.80 O
TER
ATOM 1 O3' A B 780 -17.562 28.065 108.804 1.00 51.01 O
ATOM 2 P A B 781 -18.647 28.343 109.971 1.00 53.22 P
ATOM 3 OP1 A B 781 -19.976 28.109 109.373 1.00 53.36 O
ATOM 4 OP2 A B 781 -18.363 29.673 110.549 1.00 53.66 O
ATOM 5 O5' A B 781 -18.305 27.208 111.028 1.00 53.10 O
ATOM 6 C5' A B 781 -19.032 27.092 112.237 1.00 53.57 C
ATOM 7 C4' A B 781 -18.205 26.447 113.328 1.00 53.48 C
ATOM 8 O4' A B 781 -16.805 26.768 113.135 1.00 53.16 O
ATOM 9 C3' A B 781 -18.518 26.917 114.738 1.00 54.07 C
ATOM 10 O3' A B 781 -19.553 26.179 115.329 1.00 54.31 O
ATOM 11 C2' A B 781 -17.184 26.800 115.471 1.00 53.91 C
ATOM 12 O2' A B 781 -16.955 25.475 115.918 1.00 53.64 O
ATOM 13 C1' A B 781 -16.204 27.115 114.359 1.00 53.43 C
ATOM 14 N9 A B 781 -15.877 28.544 114.314 1.00 53.72 N
ATOM 15 C8 A B 781 -16.109 29.449 113.314 1.00 53.75 C
ATOM 16 N7 A B 781 -15.662 30.653 113.611 1.00 54.06 N
ATOM 17 C5 A B 781 -15.103 30.495 114.874 1.00 54.23 C
ATOM 18 C6 A B 781 -14.472 31.371 115.742 1.00 54.58 C
ATOM 19 N6 A B 781 -14.286 32.647 115.438 1.00 54.82 N
ATOM 20 N1 A B 781 -14.052 30.913 116.925 1.00 54.70 N
ATOM 21 C2 A B 781 -14.249 29.643 117.195 1.00 54.47 C
ATOM 22 N3 A B 781 -14.822 28.704 116.471 1.00 54.13 N
ATOM 23 C4 A B 781 -15.232 29.210 115.315 1.00 54.03 C
ATOM 24 P G B 782 -20.835 26.931 115.899 1.00 56.30 P
ATOM 25 OP1 G B 782 -21.737 25.877 116.418 1.00 56.42 O
ATOM 26 OP2 G B 782 -21.320 27.818 114.815 1.00 56.37 O
ATOM 27 O5' G B 782 -20.233 27.814 117.098 1.00 56.73 O
TER
ATOM 2 P G A 800 -12.789 41.314 116.337 1.00 60.28 P
ATOM 3 OP1 G A 800 -11.919 42.000 117.329 1.00 60.62 O
ATOM 4 OP2 G A 800 -12.761 41.786 114.921 1.00 60.02 O
ATOM 5 O5' G A 800 -12.528 39.746 116.382 1.00 59.69 O
ATOM 6 C5' G A 800 -12.432 39.062 117.614 1.00 59.81 C
ATOM 7 C4' G A 800 -12.749 37.611 117.441 1.00 59.34 C
ATOM 8 O4' G A 800 -13.963 37.485 116.676 1.00 59.36 O
ATOM 9 C3' G A 800 -11.711 36.778 116.684 1.00 58.61 C
ATOM 10 O3' G A 800 -10.712 36.252 117.558 1.00 58.48 O
ATOM 11 C2' G A 800 -12.553 35.678 116.030 1.00 58.25 C
ATOM 12 O2' G A 800 -12.742 34.601 116.937 1.00 58.23 O
ATOM 13 C1' G A 800 -13.907 36.362 115.832 1.00 58.73 C
ATOM 14 N9 G A 800 -14.148 36.810 114.449 1.00 58.53 N
ATOM 15 C8 G A 800 -13.995 38.097 114.015 1.00 58.79 C
ATOM 16 N7 G A 800 -14.314 38.260 112.771 1.00 58.58 N
ATOM 17 C5 G A 800 -14.742 36.995 112.362 1.00 58.16 C
ATOM 18 C6 G A 800 -15.227 36.552 111.094 1.00 57.80 C
ATOM 19 O6 G A 800 -15.367 37.224 110.056 1.00 57.78 O
ATOM 20 N1 G A 800 -15.536 35.180 111.115 1.00 57.45 N
ATOM 21 C2 G A 800 -15.408 34.346 112.214 1.00 57.45 C
ATOM 22 N2 G A 800 -15.746 33.057 112.075 1.00 57.10 N
ATOM 23 N3 G A 800 -14.964 34.775 113.390 1.00 57.79 N
ATOM 24 C4 G A 800 -14.649 36.092 113.397 1.00 58.13 C
ATOM 25 P G A 801 -9.178 36.697 117.432 1.00 53.57 P
ATOM 26 OP1 G A 801 -8.582 36.636 118.789 1.00 53.84 O
ATOM 27 OP2 G A 801 -9.163 37.976 116.707 1.00 53.76 O
ATOM 28 O5' G A 801 -8.551 35.562 116.525 1.00 52.80 O
TER
ATOM 1 O3' A B 780 -17.562 28.065 108.804 1.00 51.01 O
ATOM 2 P A B 781 -18.647 28.343 109.971 1.00 53.22 P
ATOM 3 OP1 A B 781 -19.976 28.109 109.373 1.00 53.36 O
ATOM 4 OP2 A B 781 -18.363 29.673 110.549 1.00 53.66 O
ATOM 5 O5' A B 781 -18.305 27.208 111.028 1.00 53.10 O
ATOM 6 C5' A B 781 -19.032 27.092 112.237 1.00 53.57 C
ATOM 7 C4' A B 781 -18.205 26.447 113.328 1.00 53.48 C
ATOM 8 O4' A B 781 -16.805 26.768 113.135 1.00 53.16 O
ATOM 9 C3' A B 781 -18.518 26.917 114.738 1.00 54.07 C
ATOM 10 O3' A B 781 -19.553 26.179 115.329 1.00 54.31 O
ATOM 11 C2' A B 781 -17.184 26.800 115.471 1.00 53.91 C
ATOM 12 O2' A B 781 -16.955 25.475 115.918 1.00 53.64 O
ATOM 13 C1' A B 781 -16.204 27.115 114.359 1.00 53.43 C
ATOM 14 N9 A B 781 -15.877 28.544 114.314 1.00 53.72 N
ATOM 15 C8 A B 781 -16.109 29.449 113.314 1.00 53.75 C
ATOM 16 N7 A B 781 -15.662 30.653 113.611 1.00 54.06 N
ATOM 17 C5 A B 781 -15.103 30.495 114.874 1.00 54.23 C
ATOM 18 C6 A B 781 -14.472 31.371 115.742 1.00 54.58 C
ATOM 19 N6 A B 781 -14.286 32.647 115.438 1.00 54.82 N
ATOM 20 N1 A B 781 -14.052 30.913 116.925 1.00 54.70 N
ATOM 21 C2 A B 781 -14.249 29.643 117.195 1.00 54.47 C
ATOM 22 N3 A B 781 -14.822 28.704 116.471 1.00 54.13 N
ATOM 23 C4 A B 781 -15.232 29.210 115.315 1.00 54.03 C
ATOM 24 P G B 782 -20.835 26.931 115.899 1.00 56.30 P
ATOM 25 OP1 G B 782 -21.737 25.877 116.418 1.00 56.42 O
ATOM 26 OP2 G B 782 -21.320 27.818 114.815 1.00 56.37 O
ATOM 27 O5' G B 782 -20.233 27.814 117.098 1.00 56.73 O
TER
Atoms:
OP1: (-11.919,42.000,117.329)
OP2: (-12.761,41.786,114.921)
C3': (-11.711,36.778,116.684)
C1': (-13.907,36.362,115.832)
C5': (-12.432,39.062,117.614)
O6: (-15.367,37.224,110.056)
O4': (-13.963,37.485,116.676)
C8: (-13.995,38.097,114.015)
C2: (-15.408,34.346,112.214)
C6: (-15.227,36.552,111.094)
C5: (-14.742,36.995,112.362)
C4: (-14.649,36.092,113.397)
P: (-12.789,41.314,116.337)
C4': (-12.749,37.611,117.441)
C2': (-12.553,35.678,116.030)
O2': (-12.742,34.601,116.937)
N1: (-15.536,35.180,111.115)
N2: (-15.746,33.057,112.075)
N3: (-14.964,34.775,113.390)
N7: (-14.314,38.260,112.771)
N9: (-14.148,36.810,114.449)
O5': (-12.528,39.746,116.382)
O3': (-10.712,36.252,117.558)
OP2: (-12.761,41.786,114.921)
C3': (-11.711,36.778,116.684)
C1': (-13.907,36.362,115.832)
C5': (-12.432,39.062,117.614)
O6: (-15.367,37.224,110.056)
O4': (-13.963,37.485,116.676)
C8: (-13.995,38.097,114.015)
C2: (-15.408,34.346,112.214)
C6: (-15.227,36.552,111.094)
C5: (-14.742,36.995,112.362)
C4: (-14.649,36.092,113.397)
P: (-12.789,41.314,116.337)
C4': (-12.749,37.611,117.441)
C2': (-12.553,35.678,116.030)
O2': (-12.742,34.601,116.937)
N1: (-15.536,35.180,111.115)
N2: (-15.746,33.057,112.075)
N3: (-14.964,34.775,113.390)
N7: (-14.314,38.260,112.771)
N9: (-14.148,36.810,114.449)
O5': (-12.528,39.746,116.382)
O3': (-10.712,36.252,117.558)
OP1: (-19.976,28.109,109.373)
OP2: (-18.363,29.673,110.549)
C3': (-18.518,26.917,114.738)
C1': (-16.204,27.115,114.359)
C5': (-19.032,27.092,112.237)
O4': (-16.805,26.768,113.135)
C8: (-16.109,29.449,113.314)
O2': (-16.955,25.475,115.918)
C6: (-14.472,31.371,115.742)
C5: (-15.103,30.495,114.874)
C4: (-15.232,29.210,115.315)
P: (-18.647,28.343,109.971)
C4': (-18.205,26.447,113.328)
C2': (-17.184,26.800,115.471)
C2: (-14.249,29.643,117.195)
N1: (-14.052,30.913,116.925)
N3: (-14.822,28.704,116.471)
N6: (-14.286,32.647,115.438)
N7: (-15.662,30.653,113.611)
N9: (-15.877,28.544,114.314)
O5': (-18.305,27.208,111.028)
O3': (-19.553,26.179,115.329)
OP2: (-18.363,29.673,110.549)
C3': (-18.518,26.917,114.738)
C1': (-16.204,27.115,114.359)
C5': (-19.032,27.092,112.237)
O4': (-16.805,26.768,113.135)
C8: (-16.109,29.449,113.314)
O2': (-16.955,25.475,115.918)
C6: (-14.472,31.371,115.742)
C5: (-15.103,30.495,114.874)
C4: (-15.232,29.210,115.315)
P: (-18.647,28.343,109.971)
C4': (-18.205,26.447,113.328)
C2': (-17.184,26.800,115.471)
C2: (-14.249,29.643,117.195)
N1: (-14.052,30.913,116.925)
N3: (-14.822,28.704,116.471)
N6: (-14.286,32.647,115.438)
N7: (-15.662,30.653,113.611)
N9: (-15.877,28.544,114.314)
O5': (-18.305,27.208,111.028)
O3': (-19.553,26.179,115.329)
Image (generated by PyMOL):