Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQP:0280:0348
Extra
PDB:
ATOM 1 O3' C A 279 54.547 127.866 -1.806 1.00 83.90 O
ATOM 2 P G A 280 54.004 128.723 -0.557 1.00 84.50 P
ATOM 3 OP1 G A 280 53.137 129.804 -1.098 1.00 84.07 O
ATOM 4 OP2 G A 280 55.164 129.076 0.306 1.00 84.41 O
ATOM 5 O5' G A 280 53.080 127.701 0.243 1.00 84.80 O
ATOM 6 C5' G A 280 51.933 127.083 -0.380 1.00 85.17 C
ATOM 7 C4' G A 280 51.569 125.811 0.351 1.00 85.33 C
ATOM 8 O4' G A 280 52.666 124.864 0.235 1.00 85.54 O
ATOM 9 C3' G A 280 51.372 125.962 1.852 1.00 85.79 C
ATOM 10 O3' G A 280 50.075 126.443 2.187 1.00 86.93 O
ATOM 11 C2' G A 280 51.660 124.556 2.359 1.00 84.95 C
ATOM 12 O2' G A 280 50.593 123.653 2.150 1.00 84.31 O
ATOM 13 C1' G A 280 52.830 124.163 1.458 1.00 84.74 C
ATOM 14 N9 G A 280 54.117 124.549 2.031 1.00 84.10 N
ATOM 15 C8 G A 280 54.771 125.753 1.882 1.00 83.98 C
ATOM 16 N7 G A 280 55.907 125.803 2.523 1.00 83.35 N
ATOM 17 C5 G A 280 56.012 124.558 3.131 1.00 84.12 C
ATOM 18 C6 G A 280 57.033 124.022 3.959 1.00 84.01 C
ATOM 19 O6 G A 280 58.088 124.555 4.323 1.00 84.04 O
ATOM 20 N1 G A 280 56.733 122.725 4.367 1.00 83.63 N
ATOM 21 C2 G A 280 55.599 122.029 4.017 1.00 83.26 C
ATOM 22 N2 G A 280 55.487 120.791 4.509 1.00 82.82 N
ATOM 23 N3 G A 280 54.645 122.513 3.242 1.00 83.47 N
ATOM 24 C4 G A 280 54.914 123.774 2.838 1.00 84.13 C
ATOM 25 P A A 281 49.863 127.278 3.548 1.00 87.44 P
ATOM 26 OP1 A A 281 48.510 127.900 3.464 1.00 86.51 O
ATOM 27 OP2 A A 281 51.057 128.142 3.775 1.00 85.73 O
ATOM 28 O5' A A 281 49.843 126.149 4.673 1.00 85.87 O
TER
ATOM 1 O3' U B 347 56.870 116.276 8.392 1.00 91.70 O
ATOM 2 P A B 348 56.956 115.461 7.006 1.00 93.68 P
ATOM 3 OP1 A B 348 57.517 114.124 7.350 1.00 92.80 O
ATOM 4 OP2 A B 348 57.645 116.303 5.988 1.00 92.95 O
ATOM 5 O5' A B 348 55.432 115.285 6.564 1.00 91.98 O
ATOM 6 C5' A B 348 54.578 114.325 7.220 1.00 91.59 C
ATOM 7 C4' A B 348 53.205 114.314 6.586 1.00 91.44 C
ATOM 8 O4' A B 348 52.532 115.576 6.831 1.00 90.46 O
ATOM 9 C3' A B 348 53.164 114.168 5.075 1.00 91.65 C
ATOM 10 O3' A B 348 53.315 112.815 4.673 1.00 94.18 O
ATOM 11 C2' A B 348 51.789 114.730 4.732 1.00 90.44 C
ATOM 12 O2' A B 348 50.733 113.816 4.957 1.00 88.73 O
ATOM 13 C1' A B 348 51.679 115.880 5.735 1.00 89.63 C
ATOM 14 N9 A B 348 52.066 117.181 5.188 1.00 88.53 N
ATOM 15 C8 A B 348 53.233 117.878 5.395 1.00 88.03 C
ATOM 16 N7 A B 348 53.267 119.042 4.794 1.00 87.57 N
ATOM 17 C5 A B 348 52.045 119.116 4.139 1.00 87.33 C
ATOM 18 C6 A B 348 51.463 120.111 3.330 1.00 86.62 C
ATOM 19 N6 A B 348 52.059 121.271 3.040 1.00 85.79 N
ATOM 20 N1 A B 348 50.231 119.870 2.826 1.00 85.86 N
ATOM 21 C2 A B 348 49.633 118.707 3.124 1.00 86.29 C
ATOM 22 N3 A B 348 50.074 117.699 3.878 1.00 86.53 N
ATOM 23 C4 A B 348 51.299 117.971 4.363 1.00 87.51 C
ATOM 24 P C B 349 54.076 112.476 3.299 1.00 96.60 P
ATOM 25 OP1 C B 349 54.098 110.995 3.171 1.00 96.85 O
ATOM 26 OP2 C B 349 55.355 113.235 3.283 1.00 96.49 O
ATOM 27 O5' C B 349 53.122 113.068 2.164 1.00 96.05 O
TER
ATOM 2 P G A 280 54.004 128.723 -0.557 1.00 84.50 P
ATOM 3 OP1 G A 280 53.137 129.804 -1.098 1.00 84.07 O
ATOM 4 OP2 G A 280 55.164 129.076 0.306 1.00 84.41 O
ATOM 5 O5' G A 280 53.080 127.701 0.243 1.00 84.80 O
ATOM 6 C5' G A 280 51.933 127.083 -0.380 1.00 85.17 C
ATOM 7 C4' G A 280 51.569 125.811 0.351 1.00 85.33 C
ATOM 8 O4' G A 280 52.666 124.864 0.235 1.00 85.54 O
ATOM 9 C3' G A 280 51.372 125.962 1.852 1.00 85.79 C
ATOM 10 O3' G A 280 50.075 126.443 2.187 1.00 86.93 O
ATOM 11 C2' G A 280 51.660 124.556 2.359 1.00 84.95 C
ATOM 12 O2' G A 280 50.593 123.653 2.150 1.00 84.31 O
ATOM 13 C1' G A 280 52.830 124.163 1.458 1.00 84.74 C
ATOM 14 N9 G A 280 54.117 124.549 2.031 1.00 84.10 N
ATOM 15 C8 G A 280 54.771 125.753 1.882 1.00 83.98 C
ATOM 16 N7 G A 280 55.907 125.803 2.523 1.00 83.35 N
ATOM 17 C5 G A 280 56.012 124.558 3.131 1.00 84.12 C
ATOM 18 C6 G A 280 57.033 124.022 3.959 1.00 84.01 C
ATOM 19 O6 G A 280 58.088 124.555 4.323 1.00 84.04 O
ATOM 20 N1 G A 280 56.733 122.725 4.367 1.00 83.63 N
ATOM 21 C2 G A 280 55.599 122.029 4.017 1.00 83.26 C
ATOM 22 N2 G A 280 55.487 120.791 4.509 1.00 82.82 N
ATOM 23 N3 G A 280 54.645 122.513 3.242 1.00 83.47 N
ATOM 24 C4 G A 280 54.914 123.774 2.838 1.00 84.13 C
ATOM 25 P A A 281 49.863 127.278 3.548 1.00 87.44 P
ATOM 26 OP1 A A 281 48.510 127.900 3.464 1.00 86.51 O
ATOM 27 OP2 A A 281 51.057 128.142 3.775 1.00 85.73 O
ATOM 28 O5' A A 281 49.843 126.149 4.673 1.00 85.87 O
TER
ATOM 1 O3' U B 347 56.870 116.276 8.392 1.00 91.70 O
ATOM 2 P A B 348 56.956 115.461 7.006 1.00 93.68 P
ATOM 3 OP1 A B 348 57.517 114.124 7.350 1.00 92.80 O
ATOM 4 OP2 A B 348 57.645 116.303 5.988 1.00 92.95 O
ATOM 5 O5' A B 348 55.432 115.285 6.564 1.00 91.98 O
ATOM 6 C5' A B 348 54.578 114.325 7.220 1.00 91.59 C
ATOM 7 C4' A B 348 53.205 114.314 6.586 1.00 91.44 C
ATOM 8 O4' A B 348 52.532 115.576 6.831 1.00 90.46 O
ATOM 9 C3' A B 348 53.164 114.168 5.075 1.00 91.65 C
ATOM 10 O3' A B 348 53.315 112.815 4.673 1.00 94.18 O
ATOM 11 C2' A B 348 51.789 114.730 4.732 1.00 90.44 C
ATOM 12 O2' A B 348 50.733 113.816 4.957 1.00 88.73 O
ATOM 13 C1' A B 348 51.679 115.880 5.735 1.00 89.63 C
ATOM 14 N9 A B 348 52.066 117.181 5.188 1.00 88.53 N
ATOM 15 C8 A B 348 53.233 117.878 5.395 1.00 88.03 C
ATOM 16 N7 A B 348 53.267 119.042 4.794 1.00 87.57 N
ATOM 17 C5 A B 348 52.045 119.116 4.139 1.00 87.33 C
ATOM 18 C6 A B 348 51.463 120.111 3.330 1.00 86.62 C
ATOM 19 N6 A B 348 52.059 121.271 3.040 1.00 85.79 N
ATOM 20 N1 A B 348 50.231 119.870 2.826 1.00 85.86 N
ATOM 21 C2 A B 348 49.633 118.707 3.124 1.00 86.29 C
ATOM 22 N3 A B 348 50.074 117.699 3.878 1.00 86.53 N
ATOM 23 C4 A B 348 51.299 117.971 4.363 1.00 87.51 C
ATOM 24 P C B 349 54.076 112.476 3.299 1.00 96.60 P
ATOM 25 OP1 C B 349 54.098 110.995 3.171 1.00 96.85 O
ATOM 26 OP2 C B 349 55.355 113.235 3.283 1.00 96.49 O
ATOM 27 O5' C B 349 53.122 113.068 2.164 1.00 96.05 O
TER
Atoms:
OP1: (53.137,129.804,-1.098)
OP2: (55.164,129.076,0.306)
C3': (51.372,125.962,1.852)
C1': (52.830,124.163,1.458)
C5': (51.933,127.083,-0.380)
O6: (58.088,124.555,4.323)
O4': (52.666,124.864,0.235)
C8: (54.771,125.753,1.882)
C2: (55.599,122.029,4.017)
C6: (57.033,124.022,3.959)
C5: (56.012,124.558,3.131)
C4: (54.914,123.774,2.838)
P: (54.004,128.723,-0.557)
C4': (51.569,125.811,0.351)
C2': (51.660,124.556,2.359)
O2': (50.593,123.653,2.150)
N1: (56.733,122.725,4.367)
N2: (55.487,120.791,4.509)
N3: (54.645,122.513,3.242)
N7: (55.907,125.803,2.523)
N9: (54.117,124.549,2.031)
O5': (53.080,127.701,0.243)
O3': (50.075,126.443,2.187)
OP2: (55.164,129.076,0.306)
C3': (51.372,125.962,1.852)
C1': (52.830,124.163,1.458)
C5': (51.933,127.083,-0.380)
O6: (58.088,124.555,4.323)
O4': (52.666,124.864,0.235)
C8: (54.771,125.753,1.882)
C2: (55.599,122.029,4.017)
C6: (57.033,124.022,3.959)
C5: (56.012,124.558,3.131)
C4: (54.914,123.774,2.838)
P: (54.004,128.723,-0.557)
C4': (51.569,125.811,0.351)
C2': (51.660,124.556,2.359)
O2': (50.593,123.653,2.150)
N1: (56.733,122.725,4.367)
N2: (55.487,120.791,4.509)
N3: (54.645,122.513,3.242)
N7: (55.907,125.803,2.523)
N9: (54.117,124.549,2.031)
O5': (53.080,127.701,0.243)
O3': (50.075,126.443,2.187)
OP1: (57.517,114.124,7.350)
OP2: (57.645,116.303,5.988)
C3': (53.164,114.168,5.075)
C1': (51.679,115.880,5.735)
C5': (54.578,114.325,7.220)
O4': (52.532,115.576,6.831)
C8: (53.233,117.878,5.395)
O2': (50.733,113.816,4.957)
C6: (51.463,120.111,3.330)
C5: (52.045,119.116,4.139)
C4: (51.299,117.971,4.363)
P: (56.956,115.461,7.006)
C4': (53.205,114.314,6.586)
C2': (51.789,114.730,4.732)
C2: (49.633,118.707,3.124)
N1: (50.231,119.870,2.826)
N3: (50.074,117.699,3.878)
N6: (52.059,121.271,3.040)
N7: (53.267,119.042,4.794)
N9: (52.066,117.181,5.188)
O5': (55.432,115.285,6.564)
O3': (53.315,112.815,4.673)
OP2: (57.645,116.303,5.988)
C3': (53.164,114.168,5.075)
C1': (51.679,115.880,5.735)
C5': (54.578,114.325,7.220)
O4': (52.532,115.576,6.831)
C8: (53.233,117.878,5.395)
O2': (50.733,113.816,4.957)
C6: (51.463,120.111,3.330)
C5: (52.045,119.116,4.139)
C4: (51.299,117.971,4.363)
P: (56.956,115.461,7.006)
C4': (53.205,114.314,6.586)
C2': (51.789,114.730,4.732)
C2: (49.633,118.707,3.124)
N1: (50.231,119.870,2.826)
N3: (50.074,117.699,3.878)
N6: (52.059,121.271,3.040)
N7: (53.267,119.042,4.794)
N9: (52.066,117.181,5.188)
O5': (55.432,115.285,6.564)
O3': (53.315,112.815,4.673)
Image (generated by PyMOL):