Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3CCR:0580:0554
Extra
PDB:
ATOM 1 O3' A A 579 -6.338 103.312 106.461 1.00 65.15 O
ATOM 2 P G A 580 -6.259 103.842 104.945 1.00 67.38 P
ATOM 3 OP1 G A 580 -5.840 105.266 105.031 1.00 66.64 O
ATOM 4 OP2 G A 580 -7.515 103.480 104.216 1.00 65.03 O
ATOM 5 O5' G A 580 -5.077 102.991 104.299 1.00 63.83 O
ATOM 6 C5' G A 580 -3.704 103.335 104.531 1.00 60.48 C
ATOM 7 C4' G A 580 -2.798 102.314 103.891 1.00 59.83 C
ATOM 8 O4' G A 580 -3.123 101.010 104.430 1.00 59.56 O
ATOM 9 C3' G A 580 -2.957 102.128 102.391 1.00 59.08 C
ATOM 10 O3' G A 580 -2.231 103.091 101.656 1.00 59.79 O
ATOM 11 C2' G A 580 -2.402 100.731 102.186 1.00 58.00 C
ATOM 12 O2' G A 580 -0.994 100.706 102.209 1.00 55.77 O
ATOM 13 C1' G A 580 -2.942 100.023 103.427 1.00 59.05 C
ATOM 14 N9 G A 580 -4.230 99.386 103.174 1.00 59.27 N
ATOM 15 C8 G A 580 -5.481 99.875 103.468 1.00 59.82 C
ATOM 16 N7 G A 580 -6.441 99.072 103.103 1.00 60.79 N
ATOM 17 C5 G A 580 -5.784 97.988 102.536 1.00 60.37 C
ATOM 18 C6 G A 580 -6.299 96.796 101.958 1.00 60.86 C
ATOM 19 O6 G A 580 -7.482 96.440 101.841 1.00 60.58 O
ATOM 20 N1 G A 580 -5.276 95.972 101.494 1.00 61.06 N
ATOM 21 C2 G A 580 -3.931 96.251 101.582 1.00 60.75 C
ATOM 22 N2 G A 580 -3.095 95.334 101.078 1.00 60.69 N
ATOM 23 N3 G A 580 -3.443 97.350 102.126 1.00 59.92 N
ATOM 24 C4 G A 580 -4.419 98.168 102.575 1.00 59.56 C
ATOM 25 P A A 581 -2.984 104.399 101.121 1.00 61.69 P
ATOM 26 OP1 A A 581 -3.056 105.327 102.282 1.00 59.96 O
ATOM 27 OP2 A A 581 -4.234 103.975 100.429 1.00 60.85 O
ATOM 28 O5' A A 581 -1.992 105.009 100.035 1.00 61.50 O
TER
ATOM 1 O3' A B 553 -0.789 91.400 98.280 1.00 56.76 O
ATOM 2 P A B 554 -0.952 90.888 99.796 1.00 59.13 P
ATOM 3 OP1 A B 554 -1.223 89.424 99.743 1.00 59.46 O
ATOM 4 OP2 A B 554 -1.899 91.793 100.502 1.00 56.88 O
ATOM 5 O5' A B 554 0.482 91.117 100.442 1.00 55.63 O
ATOM 6 C5' A B 554 1.643 90.463 99.914 1.00 51.88 C
ATOM 7 C4' A B 554 2.867 91.265 100.252 1.00 48.81 C
ATOM 8 O4' A B 554 2.722 92.580 99.665 1.00 49.65 O
ATOM 9 C3' A B 554 3.029 91.567 101.725 1.00 47.68 C
ATOM 10 O3' A B 554 3.621 90.494 102.416 1.00 47.42 O
ATOM 11 C2' A B 554 3.897 92.805 101.692 1.00 47.85 C
ATOM 12 O2' A B 554 5.219 92.485 101.320 1.00 47.13 O
ATOM 13 C1' A B 554 3.246 93.562 100.542 1.00 48.08 C
ATOM 14 N9 A B 554 2.133 94.397 100.984 1.00 46.41 N
ATOM 15 C8 A B 554 0.811 94.048 101.071 1.00 46.04 C
ATOM 16 N7 A B 554 0.037 95.011 101.502 1.00 46.33 N
ATOM 17 C5 A B 554 0.910 96.068 101.715 1.00 46.71 C
ATOM 18 C6 A B 554 0.711 97.387 102.173 1.00 46.41 C
ATOM 19 N6 A B 554 -0.480 97.874 102.534 1.00 45.37 N
ATOM 20 N1 A B 554 1.793 98.194 102.252 1.00 44.99 N
ATOM 21 C2 A B 554 2.987 97.698 101.908 1.00 44.96 C
ATOM 22 N3 A B 554 3.302 96.477 101.475 1.00 45.67 N
ATOM 23 C4 A B 554 2.205 95.704 101.397 1.00 46.29 C
ATOM 24 P U B 555 2.910 89.937 103.731 1.00 45.98 P
ATOM 25 OP1 U B 555 3.648 88.739 104.184 1.00 45.08 O
ATOM 26 OP2 U B 555 1.480 89.823 103.378 1.00 48.01 O
ATOM 27 O5' U B 555 3.066 91.116 104.790 1.00 45.55 O
TER
ATOM 2 P G A 580 -6.259 103.842 104.945 1.00 67.38 P
ATOM 3 OP1 G A 580 -5.840 105.266 105.031 1.00 66.64 O
ATOM 4 OP2 G A 580 -7.515 103.480 104.216 1.00 65.03 O
ATOM 5 O5' G A 580 -5.077 102.991 104.299 1.00 63.83 O
ATOM 6 C5' G A 580 -3.704 103.335 104.531 1.00 60.48 C
ATOM 7 C4' G A 580 -2.798 102.314 103.891 1.00 59.83 C
ATOM 8 O4' G A 580 -3.123 101.010 104.430 1.00 59.56 O
ATOM 9 C3' G A 580 -2.957 102.128 102.391 1.00 59.08 C
ATOM 10 O3' G A 580 -2.231 103.091 101.656 1.00 59.79 O
ATOM 11 C2' G A 580 -2.402 100.731 102.186 1.00 58.00 C
ATOM 12 O2' G A 580 -0.994 100.706 102.209 1.00 55.77 O
ATOM 13 C1' G A 580 -2.942 100.023 103.427 1.00 59.05 C
ATOM 14 N9 G A 580 -4.230 99.386 103.174 1.00 59.27 N
ATOM 15 C8 G A 580 -5.481 99.875 103.468 1.00 59.82 C
ATOM 16 N7 G A 580 -6.441 99.072 103.103 1.00 60.79 N
ATOM 17 C5 G A 580 -5.784 97.988 102.536 1.00 60.37 C
ATOM 18 C6 G A 580 -6.299 96.796 101.958 1.00 60.86 C
ATOM 19 O6 G A 580 -7.482 96.440 101.841 1.00 60.58 O
ATOM 20 N1 G A 580 -5.276 95.972 101.494 1.00 61.06 N
ATOM 21 C2 G A 580 -3.931 96.251 101.582 1.00 60.75 C
ATOM 22 N2 G A 580 -3.095 95.334 101.078 1.00 60.69 N
ATOM 23 N3 G A 580 -3.443 97.350 102.126 1.00 59.92 N
ATOM 24 C4 G A 580 -4.419 98.168 102.575 1.00 59.56 C
ATOM 25 P A A 581 -2.984 104.399 101.121 1.00 61.69 P
ATOM 26 OP1 A A 581 -3.056 105.327 102.282 1.00 59.96 O
ATOM 27 OP2 A A 581 -4.234 103.975 100.429 1.00 60.85 O
ATOM 28 O5' A A 581 -1.992 105.009 100.035 1.00 61.50 O
TER
ATOM 1 O3' A B 553 -0.789 91.400 98.280 1.00 56.76 O
ATOM 2 P A B 554 -0.952 90.888 99.796 1.00 59.13 P
ATOM 3 OP1 A B 554 -1.223 89.424 99.743 1.00 59.46 O
ATOM 4 OP2 A B 554 -1.899 91.793 100.502 1.00 56.88 O
ATOM 5 O5' A B 554 0.482 91.117 100.442 1.00 55.63 O
ATOM 6 C5' A B 554 1.643 90.463 99.914 1.00 51.88 C
ATOM 7 C4' A B 554 2.867 91.265 100.252 1.00 48.81 C
ATOM 8 O4' A B 554 2.722 92.580 99.665 1.00 49.65 O
ATOM 9 C3' A B 554 3.029 91.567 101.725 1.00 47.68 C
ATOM 10 O3' A B 554 3.621 90.494 102.416 1.00 47.42 O
ATOM 11 C2' A B 554 3.897 92.805 101.692 1.00 47.85 C
ATOM 12 O2' A B 554 5.219 92.485 101.320 1.00 47.13 O
ATOM 13 C1' A B 554 3.246 93.562 100.542 1.00 48.08 C
ATOM 14 N9 A B 554 2.133 94.397 100.984 1.00 46.41 N
ATOM 15 C8 A B 554 0.811 94.048 101.071 1.00 46.04 C
ATOM 16 N7 A B 554 0.037 95.011 101.502 1.00 46.33 N
ATOM 17 C5 A B 554 0.910 96.068 101.715 1.00 46.71 C
ATOM 18 C6 A B 554 0.711 97.387 102.173 1.00 46.41 C
ATOM 19 N6 A B 554 -0.480 97.874 102.534 1.00 45.37 N
ATOM 20 N1 A B 554 1.793 98.194 102.252 1.00 44.99 N
ATOM 21 C2 A B 554 2.987 97.698 101.908 1.00 44.96 C
ATOM 22 N3 A B 554 3.302 96.477 101.475 1.00 45.67 N
ATOM 23 C4 A B 554 2.205 95.704 101.397 1.00 46.29 C
ATOM 24 P U B 555 2.910 89.937 103.731 1.00 45.98 P
ATOM 25 OP1 U B 555 3.648 88.739 104.184 1.00 45.08 O
ATOM 26 OP2 U B 555 1.480 89.823 103.378 1.00 48.01 O
ATOM 27 O5' U B 555 3.066 91.116 104.790 1.00 45.55 O
TER
Atoms:
OP1: (-5.840,105.266,105.031)
OP2: (-7.515,103.480,104.216)
C3': (-2.957,102.128,102.391)
C1': (-2.942,100.023,103.427)
C5': (-3.704,103.335,104.531)
O6: (-7.482,96.440,101.841)
O4': (-3.123,101.010,104.430)
C8: (-5.481,99.875,103.468)
C2: (-3.931,96.251,101.582)
C6: (-6.299,96.796,101.958)
C5: (-5.784,97.988,102.536)
C4: (-4.419,98.168,102.575)
P: (-6.259,103.842,104.945)
C4': (-2.798,102.314,103.891)
C2': (-2.402,100.731,102.186)
O2': (-0.994,100.706,102.209)
N1: (-5.276,95.972,101.494)
N2: (-3.095,95.334,101.078)
N3: (-3.443,97.350,102.126)
N7: (-6.441,99.072,103.103)
N9: (-4.230,99.386,103.174)
O5': (-5.077,102.991,104.299)
O3': (-2.231,103.091,101.656)
OP2: (-7.515,103.480,104.216)
C3': (-2.957,102.128,102.391)
C1': (-2.942,100.023,103.427)
C5': (-3.704,103.335,104.531)
O6: (-7.482,96.440,101.841)
O4': (-3.123,101.010,104.430)
C8: (-5.481,99.875,103.468)
C2: (-3.931,96.251,101.582)
C6: (-6.299,96.796,101.958)
C5: (-5.784,97.988,102.536)
C4: (-4.419,98.168,102.575)
P: (-6.259,103.842,104.945)
C4': (-2.798,102.314,103.891)
C2': (-2.402,100.731,102.186)
O2': (-0.994,100.706,102.209)
N1: (-5.276,95.972,101.494)
N2: (-3.095,95.334,101.078)
N3: (-3.443,97.350,102.126)
N7: (-6.441,99.072,103.103)
N9: (-4.230,99.386,103.174)
O5': (-5.077,102.991,104.299)
O3': (-2.231,103.091,101.656)
OP1: (-1.223,89.424,99.743)
OP2: (-1.899,91.793,100.502)
C3': (3.029,91.567,101.725)
C1': (3.246,93.562,100.542)
C5': (1.643,90.463,99.914)
O4': (2.722,92.580,99.665)
C8: (0.811,94.048,101.071)
O2': (5.219,92.485,101.320)
C6: (0.711,97.387,102.173)
C5: (0.910,96.068,101.715)
C4: (2.205,95.704,101.397)
P: (-0.952,90.888,99.796)
C4': (2.867,91.265,100.252)
C2': (3.897,92.805,101.692)
C2: (2.987,97.698,101.908)
N1: (1.793,98.194,102.252)
N3: (3.302,96.477,101.475)
N6: (-0.480,97.874,102.534)
N7: (0.037,95.011,101.502)
N9: (2.133,94.397,100.984)
O5': (0.482,91.117,100.442)
O3': (3.621,90.494,102.416)
OP2: (-1.899,91.793,100.502)
C3': (3.029,91.567,101.725)
C1': (3.246,93.562,100.542)
C5': (1.643,90.463,99.914)
O4': (2.722,92.580,99.665)
C8: (0.811,94.048,101.071)
O2': (5.219,92.485,101.320)
C6: (0.711,97.387,102.173)
C5: (0.910,96.068,101.715)
C4: (2.205,95.704,101.397)
P: (-0.952,90.888,99.796)
C4': (2.867,91.265,100.252)
C2': (3.897,92.805,101.692)
C2: (2.987,97.698,101.908)
N1: (1.793,98.194,102.252)
N3: (3.302,96.477,101.475)
N6: (-0.480,97.874,102.534)
N7: (0.037,95.011,101.502)
N9: (2.133,94.397,100.984)
O5': (0.482,91.117,100.442)
O3': (3.621,90.494,102.416)
Image (generated by PyMOL):