Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8T:A1880:A1846
Extra
PDB:
ATOM 1 O3' C A1879 -35.430 176.705 107.630 1.00 24.82 O
ATOM 2 P G A1880 -35.861 175.175 107.403 1.00 26.61 P
ATOM 3 OP1 G A1880 -35.605 174.857 105.977 1.00 26.61 O
ATOM 4 OP2 G A1880 -37.256 175.026 107.940 1.00 26.61 O
ATOM 5 O5' G A1880 -34.829 174.383 108.327 1.00 26.61 O
ATOM 6 C5' G A1880 -33.803 175.072 109.031 1.00 26.61 C
ATOM 7 C4' G A1880 -33.631 174.544 110.437 1.00 26.61 C
ATOM 8 O4' G A1880 -34.283 175.424 111.395 1.00 26.61 O
ATOM 9 C3' G A1880 -34.252 173.202 110.738 1.00 26.61 C
ATOM 10 O3' G A1880 -33.517 172.115 110.208 1.00 26.61 O
ATOM 11 C2' G A1880 -34.294 173.238 112.255 1.00 26.61 C
ATOM 12 O2' G A1880 -32.987 173.104 112.793 1.00 26.61 O
ATOM 13 C1' G A1880 -34.752 174.669 112.488 1.00 26.61 C
ATOM 14 N9 G A1880 -36.210 174.764 112.520 1.00 26.58 N
ATOM 15 C8 G A1880 -36.994 174.589 111.424 1.00 26.58 C
ATOM 16 N7 G A1880 -38.266 174.701 111.684 1.00 26.58 N
ATOM 17 C5 G A1880 -38.330 174.949 113.046 1.00 26.58 C
ATOM 18 C6 G A1880 -39.471 175.142 113.885 1.00 26.58 C
ATOM 19 O6 G A1880 -40.670 175.138 113.560 1.00 26.58 O
ATOM 20 N1 G A1880 -39.107 175.354 115.220 1.00 26.58 N
ATOM 21 C2 G A1880 -37.803 175.377 115.668 1.00 26.58 C
ATOM 22 N2 G A1880 -37.667 175.612 116.979 1.00 26.58 N
ATOM 23 N3 G A1880 -36.723 175.193 114.892 1.00 26.58 N
ATOM 24 C4 G A1880 -37.055 174.987 113.589 1.00 26.58 C
ATOM 25 P A A1881 -34.275 170.748 109.816 1.00 23.27 P
ATOM 26 OP1 A A1881 -34.500 170.762 108.348 1.00 23.27 O
ATOM 27 OP2 A A1881 -35.460 170.636 110.719 1.00 23.27 O
ATOM 28 O5' A A1881 -33.206 169.632 110.178 1.00 23.27 O
TER
ATOM 1 O3' A B1845 -38.804 174.120 121.667 1.00 9.57 O
ATOM 2 P A B1846 -38.930 175.649 121.232 1.00 7.01 P
ATOM 3 OP1 A B1846 -40.193 176.175 121.817 1.00 7.01 O
ATOM 4 OP2 A B1846 -38.746 175.685 119.754 1.00 7.01 O
ATOM 5 O5' A B1846 -37.693 176.321 121.938 1.00 7.01 O
ATOM 6 C5' A B1846 -37.247 175.852 123.176 1.00 7.01 C
ATOM 7 C4' A B1846 -35.784 176.077 123.315 1.00 7.01 C
ATOM 8 O4' A B1846 -35.074 175.067 122.567 1.00 7.01 O
ATOM 9 C3' A B1846 -35.271 177.394 122.754 1.00 7.01 C
ATOM 10 O3' A B1846 -35.454 178.494 123.648 1.00 7.01 O
ATOM 11 C2' A B1846 -33.816 177.064 122.465 1.00 7.01 C
ATOM 12 O2' A B1846 -33.057 177.047 123.666 1.00 7.01 O
ATOM 13 C1' A B1846 -33.942 175.632 121.956 1.00 7.01 C
ATOM 14 N9 A B1846 -34.156 175.575 120.514 1.00 6.85 N
ATOM 15 C8 A B1846 -35.323 175.911 119.869 1.00 6.85 C
ATOM 16 N7 A B1846 -35.257 175.731 118.566 1.00 6.85 N
ATOM 17 C5 A B1846 -33.971 175.221 118.371 1.00 6.85 C
ATOM 18 C6 A B1846 -33.295 174.824 117.220 1.00 6.85 C
ATOM 19 N6 A B1846 -33.890 174.895 116.027 1.00 6.85 N
ATOM 20 N1 A B1846 -32.027 174.369 117.336 1.00 6.85 N
ATOM 21 C2 A B1846 -31.492 174.320 118.552 1.00 6.85 C
ATOM 22 N3 A B1846 -32.029 174.656 119.716 1.00 6.85 N
ATOM 23 C4 A B1846 -33.280 175.108 119.559 1.00 6.85 C
ATOM 24 P U B1847 -36.118 179.867 123.120 1.00 26.77 P
ATOM 25 OP1 U B1847 -36.030 180.861 124.217 1.00 26.77 O
ATOM 26 OP2 U B1847 -37.461 179.526 122.581 1.00 26.77 O
ATOM 27 O5' U B1847 -35.131 180.279 121.943 1.00 26.77 O
TER
ATOM 2 P G A1880 -35.861 175.175 107.403 1.00 26.61 P
ATOM 3 OP1 G A1880 -35.605 174.857 105.977 1.00 26.61 O
ATOM 4 OP2 G A1880 -37.256 175.026 107.940 1.00 26.61 O
ATOM 5 O5' G A1880 -34.829 174.383 108.327 1.00 26.61 O
ATOM 6 C5' G A1880 -33.803 175.072 109.031 1.00 26.61 C
ATOM 7 C4' G A1880 -33.631 174.544 110.437 1.00 26.61 C
ATOM 8 O4' G A1880 -34.283 175.424 111.395 1.00 26.61 O
ATOM 9 C3' G A1880 -34.252 173.202 110.738 1.00 26.61 C
ATOM 10 O3' G A1880 -33.517 172.115 110.208 1.00 26.61 O
ATOM 11 C2' G A1880 -34.294 173.238 112.255 1.00 26.61 C
ATOM 12 O2' G A1880 -32.987 173.104 112.793 1.00 26.61 O
ATOM 13 C1' G A1880 -34.752 174.669 112.488 1.00 26.61 C
ATOM 14 N9 G A1880 -36.210 174.764 112.520 1.00 26.58 N
ATOM 15 C8 G A1880 -36.994 174.589 111.424 1.00 26.58 C
ATOM 16 N7 G A1880 -38.266 174.701 111.684 1.00 26.58 N
ATOM 17 C5 G A1880 -38.330 174.949 113.046 1.00 26.58 C
ATOM 18 C6 G A1880 -39.471 175.142 113.885 1.00 26.58 C
ATOM 19 O6 G A1880 -40.670 175.138 113.560 1.00 26.58 O
ATOM 20 N1 G A1880 -39.107 175.354 115.220 1.00 26.58 N
ATOM 21 C2 G A1880 -37.803 175.377 115.668 1.00 26.58 C
ATOM 22 N2 G A1880 -37.667 175.612 116.979 1.00 26.58 N
ATOM 23 N3 G A1880 -36.723 175.193 114.892 1.00 26.58 N
ATOM 24 C4 G A1880 -37.055 174.987 113.589 1.00 26.58 C
ATOM 25 P A A1881 -34.275 170.748 109.816 1.00 23.27 P
ATOM 26 OP1 A A1881 -34.500 170.762 108.348 1.00 23.27 O
ATOM 27 OP2 A A1881 -35.460 170.636 110.719 1.00 23.27 O
ATOM 28 O5' A A1881 -33.206 169.632 110.178 1.00 23.27 O
TER
ATOM 1 O3' A B1845 -38.804 174.120 121.667 1.00 9.57 O
ATOM 2 P A B1846 -38.930 175.649 121.232 1.00 7.01 P
ATOM 3 OP1 A B1846 -40.193 176.175 121.817 1.00 7.01 O
ATOM 4 OP2 A B1846 -38.746 175.685 119.754 1.00 7.01 O
ATOM 5 O5' A B1846 -37.693 176.321 121.938 1.00 7.01 O
ATOM 6 C5' A B1846 -37.247 175.852 123.176 1.00 7.01 C
ATOM 7 C4' A B1846 -35.784 176.077 123.315 1.00 7.01 C
ATOM 8 O4' A B1846 -35.074 175.067 122.567 1.00 7.01 O
ATOM 9 C3' A B1846 -35.271 177.394 122.754 1.00 7.01 C
ATOM 10 O3' A B1846 -35.454 178.494 123.648 1.00 7.01 O
ATOM 11 C2' A B1846 -33.816 177.064 122.465 1.00 7.01 C
ATOM 12 O2' A B1846 -33.057 177.047 123.666 1.00 7.01 O
ATOM 13 C1' A B1846 -33.942 175.632 121.956 1.00 7.01 C
ATOM 14 N9 A B1846 -34.156 175.575 120.514 1.00 6.85 N
ATOM 15 C8 A B1846 -35.323 175.911 119.869 1.00 6.85 C
ATOM 16 N7 A B1846 -35.257 175.731 118.566 1.00 6.85 N
ATOM 17 C5 A B1846 -33.971 175.221 118.371 1.00 6.85 C
ATOM 18 C6 A B1846 -33.295 174.824 117.220 1.00 6.85 C
ATOM 19 N6 A B1846 -33.890 174.895 116.027 1.00 6.85 N
ATOM 20 N1 A B1846 -32.027 174.369 117.336 1.00 6.85 N
ATOM 21 C2 A B1846 -31.492 174.320 118.552 1.00 6.85 C
ATOM 22 N3 A B1846 -32.029 174.656 119.716 1.00 6.85 N
ATOM 23 C4 A B1846 -33.280 175.108 119.559 1.00 6.85 C
ATOM 24 P U B1847 -36.118 179.867 123.120 1.00 26.77 P
ATOM 25 OP1 U B1847 -36.030 180.861 124.217 1.00 26.77 O
ATOM 26 OP2 U B1847 -37.461 179.526 122.581 1.00 26.77 O
ATOM 27 O5' U B1847 -35.131 180.279 121.943 1.00 26.77 O
TER
Atoms:
OP1: (-35.605,174.857,105.977)
OP2: (-37.256,175.026,107.940)
C3': (-34.252,173.202,110.738)
C1': (-34.752,174.669,112.488)
C5': (-33.803,175.072,109.031)
O6: (-40.670,175.138,113.560)
O4': (-34.283,175.424,111.395)
C8: (-36.994,174.589,111.424)
C2: (-37.803,175.377,115.668)
C6: (-39.471,175.142,113.885)
C5: (-38.330,174.949,113.046)
C4: (-37.055,174.987,113.589)
P: (-35.861,175.175,107.403)
C4': (-33.631,174.544,110.437)
C2': (-34.294,173.238,112.255)
O2': (-32.987,173.104,112.793)
N1: (-39.107,175.354,115.220)
N2: (-37.667,175.612,116.979)
N3: (-36.723,175.193,114.892)
N7: (-38.266,174.701,111.684)
N9: (-36.210,174.764,112.520)
O5': (-34.829,174.383,108.327)
O3': (-33.517,172.115,110.208)
OP2: (-37.256,175.026,107.940)
C3': (-34.252,173.202,110.738)
C1': (-34.752,174.669,112.488)
C5': (-33.803,175.072,109.031)
O6: (-40.670,175.138,113.560)
O4': (-34.283,175.424,111.395)
C8: (-36.994,174.589,111.424)
C2: (-37.803,175.377,115.668)
C6: (-39.471,175.142,113.885)
C5: (-38.330,174.949,113.046)
C4: (-37.055,174.987,113.589)
P: (-35.861,175.175,107.403)
C4': (-33.631,174.544,110.437)
C2': (-34.294,173.238,112.255)
O2': (-32.987,173.104,112.793)
N1: (-39.107,175.354,115.220)
N2: (-37.667,175.612,116.979)
N3: (-36.723,175.193,114.892)
N7: (-38.266,174.701,111.684)
N9: (-36.210,174.764,112.520)
O5': (-34.829,174.383,108.327)
O3': (-33.517,172.115,110.208)
OP1: (-40.193,176.175,121.817)
OP2: (-38.746,175.685,119.754)
C3': (-35.271,177.394,122.754)
C1': (-33.942,175.632,121.956)
C5': (-37.247,175.852,123.176)
O4': (-35.074,175.067,122.567)
C8: (-35.323,175.911,119.869)
O2': (-33.057,177.047,123.666)
C6: (-33.295,174.824,117.220)
C5: (-33.971,175.221,118.371)
C4: (-33.280,175.108,119.559)
P: (-38.930,175.649,121.232)
C4': (-35.784,176.077,123.315)
C2': (-33.816,177.064,122.465)
C2: (-31.492,174.320,118.552)
N1: (-32.027,174.369,117.336)
N3: (-32.029,174.656,119.716)
N6: (-33.890,174.895,116.027)
N7: (-35.257,175.731,118.566)
N9: (-34.156,175.575,120.514)
O5': (-37.693,176.321,121.938)
O3': (-35.454,178.494,123.648)
OP2: (-38.746,175.685,119.754)
C3': (-35.271,177.394,122.754)
C1': (-33.942,175.632,121.956)
C5': (-37.247,175.852,123.176)
O4': (-35.074,175.067,122.567)
C8: (-35.323,175.911,119.869)
O2': (-33.057,177.047,123.666)
C6: (-33.295,174.824,117.220)
C5: (-33.971,175.221,118.371)
C4: (-33.280,175.108,119.559)
P: (-38.930,175.649,121.232)
C4': (-35.784,176.077,123.315)
C2': (-33.816,177.064,122.465)
C2: (-31.492,174.320,118.552)
N1: (-32.027,174.369,117.336)
N3: (-32.029,174.656,119.716)
N6: (-33.890,174.895,116.027)
N7: (-35.257,175.731,118.566)
N9: (-34.156,175.575,120.514)
O5': (-37.693,176.321,121.938)
O3': (-35.454,178.494,123.648)
Image (generated by PyMOL):