ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YIJ:02116:02069

Extra

PDB:
ATOM 1 O3' C A2115 103.052 104.498 67.220 1.00 48.74 O
ATOM 2 P G A2116 101.622 104.677 67.928 1.00 50.50 P
ATOM 3 OP1 G A2116 101.896 105.150 69.308 1.00 53.23 O
ATOM 4 OP2 G A2116 100.805 103.448 67.723 1.00 45.55 O
ATOM 5 O5' G A2116 100.951 105.885 67.134 1.00 50.06 O
ATOM 6 C5' G A2116 101.502 107.220 67.198 1.00 48.44 C
ATOM 7 C4' G A2116 100.695 108.161 66.332 1.00 48.80 C
ATOM 8 O4' G A2116 100.840 107.798 64.934 1.00 48.76 O
ATOM 9 C3' G A2116 99.196 108.101 66.571 1.00 49.69 C
ATOM 10 O3' G A2116 98.811 108.874 67.691 1.00 50.12 O
ATOM 11 C2' G A2116 98.638 108.625 65.260 1.00 49.76 C
ATOM 12 O2' G A2116 98.736 110.032 65.148 1.00 50.12 O
ATOM 13 C1' G A2116 99.597 107.972 64.265 1.00 49.37 C
ATOM 14 N9 G A2116 99.129 106.661 63.825 1.00 47.70 N
ATOM 15 C8 G A2116 99.450 105.443 64.371 1.00 47.09 C
ATOM 16 N7 G A2116 98.895 104.441 63.747 1.00 47.32 N
ATOM 17 C5 G A2116 98.160 105.032 62.732 1.00 46.82 C
ATOM 18 C6 G A2116 97.356 104.448 61.726 1.00 47.72 C
ATOM 19 O6 G A2116 97.133 103.249 61.516 1.00 50.33 O
ATOM 20 N1 G A2116 96.785 105.412 60.904 1.00 47.00 N
ATOM 21 C2 G A2116 96.971 106.763 61.027 1.00 46.51 C
ATOM 22 N2 G A2116 96.336 107.527 60.128 1.00 45.82 N
ATOM 23 N3 G A2116 97.723 107.324 61.960 1.00 46.98 N
ATOM 24 C4 G A2116 98.284 106.404 62.772 1.00 47.28 C
ATOM 25 P G A2117 98.108 108.153 68.940 1.00 53.56 P
ATOM 26 OP1 G A2117 98.985 108.410 70.124 1.00 47.91 O
ATOM 27 OP2 G A2117 97.767 106.750 68.561 1.00 52.21 O
ATOM 28 O5' G A2117 96.731 108.940 69.098 1.00 48.66 O
TER

ATOM 1 O3' C B2068 91.308 109.066 55.461 1.00 37.13 O
ATOM 2 P A B2069 92.682 109.438 54.717 1.00 37.59 P
ATOM 3 OP1 A B2069 92.336 109.501 53.277 1.00 34.67 O
ATOM 4 OP2 A B2069 93.757 108.521 55.184 1.00 33.40 O
ATOM 5 O5' A B2069 92.997 110.916 55.227 1.00 35.42 O
ATOM 6 C5' A B2069 94.325 111.447 55.194 1.00 34.91 C
ATOM 7 C4' A B2069 94.402 112.716 56.011 1.00 34.72 C
ATOM 8 O4' A B2069 93.971 112.448 57.372 1.00 35.22 O
ATOM 9 C3' A B2069 95.808 113.273 56.161 1.00 33.94 C
ATOM 10 O3' A B2069 96.159 114.089 55.050 1.00 34.09 O
ATOM 11 C2' A B2069 95.714 114.065 57.456 1.00 33.57 C
ATOM 12 O2' A B2069 95.105 115.325 57.292 1.00 35.83 O
ATOM 13 C1' A B2069 94.784 113.175 58.281 1.00 34.23 C
ATOM 14 N9 A B2069 95.503 112.218 59.123 1.00 32.75 N
ATOM 15 C8 A B2069 95.470 110.850 59.062 1.00 31.69 C
ATOM 16 N7 A B2069 96.208 110.264 59.967 1.00 31.76 N
ATOM 17 C5 A B2069 96.768 111.316 60.672 1.00 32.58 C
ATOM 18 C6 A B2069 97.630 111.355 61.773 1.00 34.22 C
ATOM 19 N6 A B2069 98.085 110.265 62.393 1.00 37.12 N
ATOM 20 N1 A B2069 98.007 112.566 62.232 1.00 33.84 N
ATOM 21 C2 A B2069 97.529 113.657 61.623 1.00 33.14 C
ATOM 22 N3 A B2069 96.702 113.748 60.588 1.00 33.67 N
ATOM 23 C4 A B2069 96.353 112.525 60.155 1.00 32.84 C
ATOM 24 P G B2070 97.547 113.839 54.275 1.00 32.70 P
ATOM 25 OP1 G B2070 97.686 114.963 53.309 1.00 33.76 O
ATOM 26 OP2 G B2070 97.569 112.447 53.773 1.00 33.01 O
ATOM 27 O5' G B2070 98.651 113.998 55.415 1.00 32.12 O
TER

Atoms:
OP1: (101.896,105.150,69.308)
OP2: (100.805,103.448,67.723)
C3': (99.196,108.101,66.571)
C1': (99.597,107.972,64.265)
C5': (101.502,107.220,67.198)
O6: (97.133,103.249,61.516)
O4': (100.840,107.798,64.934)
C8: (99.450,105.443,64.371)
C2: (96.971,106.763,61.027)
C6: (97.356,104.448,61.726)
C5: (98.160,105.032,62.732)
C4: (98.284,106.404,62.772)
P: (101.622,104.677,67.928)
C4': (100.695,108.161,66.332)
C2': (98.638,108.625,65.260)
O2': (98.736,110.032,65.148)
N1: (96.785,105.412,60.904)
N2: (96.336,107.527,60.128)
N3: (97.723,107.324,61.960)
N7: (98.895,104.441,63.747)
N9: (99.129,106.661,63.825)
O5': (100.951,105.885,67.134)
O3': (98.811,108.874,67.691)
OP1: (92.336,109.501,53.277)
OP2: (93.757,108.521,55.184)
C3': (95.808,113.273,56.161)
C1': (94.784,113.175,58.281)
C5': (94.325,111.447,55.194)
O4': (93.971,112.448,57.372)
C8: (95.470,110.850,59.062)
O2': (95.105,115.325,57.292)
C6: (97.630,111.355,61.773)
C5: (96.768,111.316,60.672)
C4: (96.353,112.525,60.155)
P: (92.682,109.438,54.717)
C4': (94.402,112.716,56.011)
C2': (95.714,114.065,57.456)
C2: (97.529,113.657,61.623)
N1: (98.007,112.566,62.232)
N3: (96.702,113.748,60.588)
N6: (98.085,110.265,62.393)
N7: (96.208,110.264,59.967)
N9: (95.503,112.218,59.123)
O5': (92.997,110.916,55.227)
O3': (96.159,114.089,55.050)
Image (generated by PyMOL):
PyMOL image
show in jmol