ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1S72:0355:0273

Extra

PDB:
ATOM 1 O3' U A 354 73.495 112.601 -9.535 1.00 88.36 O
ATOM 2 P G A 355 73.671 111.512 -10.710 1.00 89.28 P
ATOM 3 OP1 G A 355 75.094 111.561 -11.131 1.00 89.54 O
ATOM 4 OP2 G A 355 72.600 111.709 -11.720 1.00 89.13 O
ATOM 5 O5' G A 355 73.429 110.113 -9.989 1.00 88.90 O
ATOM 6 C5' G A 355 74.015 109.837 -8.705 1.00 90.37 C
ATOM 7 C4' G A 355 73.130 108.897 -7.923 1.00 91.47 C
ATOM 8 O4' G A 355 71.783 109.446 -7.915 1.00 91.68 O
ATOM 9 C3' G A 355 73.001 107.478 -8.471 1.00 92.29 C
ATOM 10 O3' G A 355 72.799 106.583 -7.386 1.00 92.80 O
ATOM 11 C2' G A 355 71.738 107.558 -9.324 1.00 92.40 C
ATOM 12 O2' G A 355 71.076 106.315 -9.476 1.00 92.08 O
ATOM 13 C1' G A 355 70.885 108.530 -8.512 1.00 91.81 C
ATOM 14 N9 G A 355 69.946 109.289 -9.331 1.00 91.40 N
ATOM 15 C8 G A 355 70.231 110.008 -10.469 1.00 91.85 C
ATOM 16 N7 G A 355 69.181 110.579 -10.992 1.00 92.27 N
ATOM 17 C5 G A 355 68.137 110.217 -10.150 1.00 91.41 C
ATOM 18 C6 G A 355 66.755 110.536 -10.212 1.00 91.46 C
ATOM 19 O6 G A 355 66.158 111.220 -11.054 1.00 91.65 O
ATOM 20 N1 G A 355 66.053 109.965 -9.154 1.00 91.34 N
ATOM 21 C2 G A 355 66.607 109.188 -8.164 1.00 90.89 C
ATOM 22 N2 G A 355 65.766 108.737 -7.222 1.00 90.45 N
ATOM 23 N3 G A 355 67.892 108.878 -8.100 1.00 90.48 N
ATOM 24 C4 G A 355 68.593 109.424 -9.117 1.00 91.22 C
ATOM 25 P C A 356 73.631 105.210 -7.311 1.00 93.54 P
ATOM 26 OP1 C A 356 74.923 105.490 -6.626 1.00 93.52 O
ATOM 27 OP2 C A 356 73.636 104.589 -8.658 1.00 93.82 O
ATOM 28 O5' C A 356 72.742 104.305 -6.349 1.00 93.21 O
TER

ATOM 1 O3' C B 272 61.195 106.559 -4.484 1.00116.60 O
ATOM 2 P A B 273 62.101 107.228 -3.328 1.00113.55 P
ATOM 3 OP1 A B 273 61.229 107.447 -2.142 1.00113.79 O
ATOM 4 OP2 A B 273 62.802 108.384 -3.951 1.00112.60 O
ATOM 5 O5' A B 273 63.204 106.133 -2.965 1.00110.12 O
ATOM 6 C5' A B 273 62.935 105.054 -2.045 1.00103.72 C
ATOM 7 C4' A B 273 64.195 104.701 -1.282 1.00 98.88 C
ATOM 8 O4' A B 273 65.231 104.302 -2.224 1.00 97.66 O
ATOM 9 C3' A B 273 64.826 105.853 -0.516 1.00 95.87 C
ATOM 10 O3' A B 273 64.203 106.062 0.746 1.00 92.64 O
ATOM 11 C2' A B 273 66.279 105.411 -0.408 1.00 95.16 C
ATOM 12 O2' A B 273 66.484 104.425 0.583 1.00 95.14 O
ATOM 13 C1' A B 273 66.496 104.784 -1.787 1.00 95.09 C
ATOM 14 N9 A B 273 66.994 105.742 -2.782 1.00 93.34 N
ATOM 15 C8 A B 273 66.301 106.306 -3.830 1.00 92.53 C
ATOM 16 N7 A B 273 67.013 107.139 -4.550 1.00 91.19 N
ATOM 17 C5 A B 273 68.260 107.123 -3.941 1.00 90.60 C
ATOM 18 C6 A B 273 69.460 107.798 -4.229 1.00 89.42 C
ATOM 19 N6 A B 273 69.608 108.647 -5.246 1.00 88.47 N
ATOM 20 N1 A B 273 70.518 107.565 -3.426 1.00 89.68 N
ATOM 21 C2 A B 273 70.373 106.709 -2.407 1.00 90.26 C
ATOM 22 N3 A B 273 69.301 106.012 -2.036 1.00 90.88 N
ATOM 23 C4 A B 273 68.264 106.267 -2.852 1.00 91.59 C
ATOM 24 P U B 274 63.960 107.562 1.275 1.00 90.63 P
ATOM 25 OP1 U B 274 63.253 107.476 2.580 1.00 90.61 O
ATOM 26 OP2 U B 274 63.363 108.353 0.168 1.00 89.83 O
ATOM 27 O5' U B 274 65.428 108.121 1.540 1.00 87.23 O
TER

Atoms:
OP1: (75.094,111.561,-11.131)
OP2: (72.600,111.709,-11.720)
C3': (73.001,107.478,-8.471)
C1': (70.885,108.530,-8.512)
C5': (74.015,109.837,-8.705)
O6: (66.158,111.220,-11.054)
O4': (71.783,109.446,-7.915)
C8: (70.231,110.008,-10.469)
C2: (66.607,109.188,-8.164)
C6: (66.755,110.536,-10.212)
C5: (68.137,110.217,-10.150)
C4: (68.593,109.424,-9.117)
P: (73.671,111.512,-10.710)
C4': (73.130,108.897,-7.923)
C2': (71.738,107.558,-9.324)
O2': (71.076,106.315,-9.476)
N1: (66.053,109.965,-9.154)
N2: (65.766,108.737,-7.222)
N3: (67.892,108.878,-8.100)
N7: (69.181,110.579,-10.992)
N9: (69.946,109.289,-9.331)
O5': (73.429,110.113,-9.989)
O3': (72.799,106.583,-7.386)
OP1: (61.229,107.447,-2.142)
OP2: (62.802,108.384,-3.951)
C3': (64.826,105.853,-0.516)
C1': (66.496,104.784,-1.787)
C5': (62.935,105.054,-2.045)
O4': (65.231,104.302,-2.224)
C8: (66.301,106.306,-3.830)
O2': (66.484,104.425,0.583)
C6: (69.460,107.798,-4.229)
C5: (68.260,107.123,-3.941)
C4: (68.264,106.267,-2.852)
P: (62.101,107.228,-3.328)
C4': (64.195,104.701,-1.282)
C2': (66.279,105.411,-0.408)
C2: (70.373,106.709,-2.407)
N1: (70.518,107.565,-3.426)
N3: (69.301,106.012,-2.036)
N6: (69.608,108.647,-5.246)
N7: (67.013,107.139,-4.550)
N9: (66.994,105.742,-2.782)
O5': (63.204,106.133,-2.965)
O3': (64.203,106.062,0.746)
Image (generated by PyMOL):
PyMOL image
show in jmol