Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQM:0423:0223
Extra
PDB:
ATOM 1 O3' U A 422 66.196 114.917 15.803 1.00 49.06 O
ATOM 2 P A A 423 65.298 114.680 17.106 1.00 49.72 P
ATOM 3 OP1 A A 423 65.690 115.687 18.115 1.00 53.37 O
ATOM 4 OP2 A A 423 65.350 113.230 17.454 1.00 50.76 O
ATOM 5 O5' A A 423 63.817 115.031 16.647 1.00 49.74 O
ATOM 6 C5' A A 423 63.531 116.182 15.835 1.00 49.10 C
ATOM 7 C4' A A 423 62.236 115.963 15.093 1.00 49.38 C
ATOM 8 O4' A A 423 62.418 114.883 14.143 1.00 50.80 O
ATOM 9 C3' A A 423 61.095 115.502 15.984 1.00 51.18 C
ATOM 10 O3' A A 423 60.404 116.612 16.534 1.00 52.20 O
ATOM 11 C2' A A 423 60.222 114.699 15.034 1.00 49.94 C
ATOM 12 O2' A A 423 59.416 115.540 14.244 1.00 52.54 O
ATOM 13 C1' A A 423 61.274 114.048 14.137 1.00 49.07 C
ATOM 14 N9 A A 423 61.700 112.703 14.525 1.00 48.27 N
ATOM 15 C8 A A 423 62.885 112.334 15.115 1.00 47.19 C
ATOM 16 N7 A A 423 63.020 111.040 15.269 1.00 46.63 N
ATOM 17 C5 A A 423 61.839 110.519 14.761 1.00 45.83 C
ATOM 18 C6 A A 423 61.373 109.202 14.616 1.00 44.07 C
ATOM 19 N6 A A 423 62.074 108.123 14.960 1.00 43.82 N
ATOM 20 N1 A A 423 60.147 109.028 14.087 1.00 47.08 N
ATOM 21 C2 A A 423 59.447 110.111 13.714 1.00 48.67 C
ATOM 22 N3 A A 423 59.783 111.397 13.783 1.00 46.82 N
ATOM 23 C4 A A 423 61.005 111.535 14.322 1.00 46.90 C
ATOM 24 P A A 424 59.651 116.458 17.936 1.00 53.73 P
ATOM 25 OP1 A A 424 58.838 117.678 18.153 1.00 54.03 O
ATOM 26 OP2 A A 424 60.652 116.053 18.948 1.00 53.40 O
ATOM 27 O5' A A 424 58.667 115.227 17.705 1.00 54.32 O
TER
ATOM 1 O3' A B 222 53.056 109.456 16.593 1.00 53.88 O
ATOM 2 P C B 223 53.254 109.336 15.001 1.00 56.33 P
ATOM 3 OP1 C B 223 53.221 110.721 14.460 1.00 59.35 O
ATOM 4 OP2 C B 223 52.344 108.303 14.438 1.00 55.92 O
ATOM 5 O5' C B 223 54.748 108.814 14.892 1.00 55.66 O
ATOM 6 C5' C B 223 55.217 108.137 13.745 1.00 53.44 C
ATOM 7 C4' C B 223 56.565 107.547 14.040 1.00 53.13 C
ATOM 8 O4' C B 223 56.454 106.628 15.157 1.00 53.42 O
ATOM 9 C3' C B 223 57.139 106.719 12.912 1.00 52.22 C
ATOM 10 O3' C B 223 57.787 107.571 11.972 1.00 54.65 O
ATOM 11 C2' C B 223 58.070 105.774 13.653 1.00 50.06 C
ATOM 12 O2' C B 223 59.262 106.403 14.055 1.00 47.82 O
ATOM 13 C1' C B 223 57.247 105.475 14.909 1.00 49.97 C
ATOM 14 N1 C B 223 56.343 104.311 14.762 1.00 47.38 N
ATOM 15 C2 C B 223 56.895 103.021 14.691 1.00 46.95 C
ATOM 16 O2 C B 223 58.124 102.882 14.777 1.00 45.52 O
ATOM 17 N3 C B 223 56.072 101.960 14.530 1.00 47.20 N
ATOM 18 C4 C B 223 54.751 102.145 14.440 1.00 47.91 C
ATOM 19 N4 C B 223 53.984 101.071 14.249 1.00 48.09 N
ATOM 20 C5 C B 223 54.161 103.440 14.531 1.00 46.79 C
ATOM 21 C6 C B 223 54.985 104.483 14.687 1.00 48.18 C
ATOM 22 P A B 224 57.871 107.133 10.434 1.00 54.06 P
ATOM 23 OP1 A B 224 58.525 108.224 9.671 1.00 57.21 O
ATOM 24 OP2 A B 224 56.495 106.700 10.064 1.00 53.61 O
ATOM 25 O5' A B 224 58.859 105.884 10.494 1.00 52.34 O
TER
ATOM 2 P A A 423 65.298 114.680 17.106 1.00 49.72 P
ATOM 3 OP1 A A 423 65.690 115.687 18.115 1.00 53.37 O
ATOM 4 OP2 A A 423 65.350 113.230 17.454 1.00 50.76 O
ATOM 5 O5' A A 423 63.817 115.031 16.647 1.00 49.74 O
ATOM 6 C5' A A 423 63.531 116.182 15.835 1.00 49.10 C
ATOM 7 C4' A A 423 62.236 115.963 15.093 1.00 49.38 C
ATOM 8 O4' A A 423 62.418 114.883 14.143 1.00 50.80 O
ATOM 9 C3' A A 423 61.095 115.502 15.984 1.00 51.18 C
ATOM 10 O3' A A 423 60.404 116.612 16.534 1.00 52.20 O
ATOM 11 C2' A A 423 60.222 114.699 15.034 1.00 49.94 C
ATOM 12 O2' A A 423 59.416 115.540 14.244 1.00 52.54 O
ATOM 13 C1' A A 423 61.274 114.048 14.137 1.00 49.07 C
ATOM 14 N9 A A 423 61.700 112.703 14.525 1.00 48.27 N
ATOM 15 C8 A A 423 62.885 112.334 15.115 1.00 47.19 C
ATOM 16 N7 A A 423 63.020 111.040 15.269 1.00 46.63 N
ATOM 17 C5 A A 423 61.839 110.519 14.761 1.00 45.83 C
ATOM 18 C6 A A 423 61.373 109.202 14.616 1.00 44.07 C
ATOM 19 N6 A A 423 62.074 108.123 14.960 1.00 43.82 N
ATOM 20 N1 A A 423 60.147 109.028 14.087 1.00 47.08 N
ATOM 21 C2 A A 423 59.447 110.111 13.714 1.00 48.67 C
ATOM 22 N3 A A 423 59.783 111.397 13.783 1.00 46.82 N
ATOM 23 C4 A A 423 61.005 111.535 14.322 1.00 46.90 C
ATOM 24 P A A 424 59.651 116.458 17.936 1.00 53.73 P
ATOM 25 OP1 A A 424 58.838 117.678 18.153 1.00 54.03 O
ATOM 26 OP2 A A 424 60.652 116.053 18.948 1.00 53.40 O
ATOM 27 O5' A A 424 58.667 115.227 17.705 1.00 54.32 O
TER
ATOM 1 O3' A B 222 53.056 109.456 16.593 1.00 53.88 O
ATOM 2 P C B 223 53.254 109.336 15.001 1.00 56.33 P
ATOM 3 OP1 C B 223 53.221 110.721 14.460 1.00 59.35 O
ATOM 4 OP2 C B 223 52.344 108.303 14.438 1.00 55.92 O
ATOM 5 O5' C B 223 54.748 108.814 14.892 1.00 55.66 O
ATOM 6 C5' C B 223 55.217 108.137 13.745 1.00 53.44 C
ATOM 7 C4' C B 223 56.565 107.547 14.040 1.00 53.13 C
ATOM 8 O4' C B 223 56.454 106.628 15.157 1.00 53.42 O
ATOM 9 C3' C B 223 57.139 106.719 12.912 1.00 52.22 C
ATOM 10 O3' C B 223 57.787 107.571 11.972 1.00 54.65 O
ATOM 11 C2' C B 223 58.070 105.774 13.653 1.00 50.06 C
ATOM 12 O2' C B 223 59.262 106.403 14.055 1.00 47.82 O
ATOM 13 C1' C B 223 57.247 105.475 14.909 1.00 49.97 C
ATOM 14 N1 C B 223 56.343 104.311 14.762 1.00 47.38 N
ATOM 15 C2 C B 223 56.895 103.021 14.691 1.00 46.95 C
ATOM 16 O2 C B 223 58.124 102.882 14.777 1.00 45.52 O
ATOM 17 N3 C B 223 56.072 101.960 14.530 1.00 47.20 N
ATOM 18 C4 C B 223 54.751 102.145 14.440 1.00 47.91 C
ATOM 19 N4 C B 223 53.984 101.071 14.249 1.00 48.09 N
ATOM 20 C5 C B 223 54.161 103.440 14.531 1.00 46.79 C
ATOM 21 C6 C B 223 54.985 104.483 14.687 1.00 48.18 C
ATOM 22 P A B 224 57.871 107.133 10.434 1.00 54.06 P
ATOM 23 OP1 A B 224 58.525 108.224 9.671 1.00 57.21 O
ATOM 24 OP2 A B 224 56.495 106.700 10.064 1.00 53.61 O
ATOM 25 O5' A B 224 58.859 105.884 10.494 1.00 52.34 O
TER
Atoms:
OP1: (65.690,115.687,18.115)
OP2: (65.350,113.230,17.454)
C3': (61.095,115.502,15.984)
C1': (61.274,114.048,14.137)
C5': (63.531,116.182,15.835)
O4': (62.418,114.883,14.143)
C8: (62.885,112.334,15.115)
O2': (59.416,115.540,14.244)
C6: (61.373,109.202,14.616)
C5: (61.839,110.519,14.761)
C4: (61.005,111.535,14.322)
P: (65.298,114.680,17.106)
C4': (62.236,115.963,15.093)
C2': (60.222,114.699,15.034)
C2: (59.447,110.111,13.714)
N1: (60.147,109.028,14.087)
N3: (59.783,111.397,13.783)
N6: (62.074,108.123,14.960)
N7: (63.020,111.040,15.269)
N9: (61.700,112.703,14.525)
O5': (63.817,115.031,16.647)
O3': (60.404,116.612,16.534)
OP2: (65.350,113.230,17.454)
C3': (61.095,115.502,15.984)
C1': (61.274,114.048,14.137)
C5': (63.531,116.182,15.835)
O4': (62.418,114.883,14.143)
C8: (62.885,112.334,15.115)
O2': (59.416,115.540,14.244)
C6: (61.373,109.202,14.616)
C5: (61.839,110.519,14.761)
C4: (61.005,111.535,14.322)
P: (65.298,114.680,17.106)
C4': (62.236,115.963,15.093)
C2': (60.222,114.699,15.034)
C2: (59.447,110.111,13.714)
N1: (60.147,109.028,14.087)
N3: (59.783,111.397,13.783)
N6: (62.074,108.123,14.960)
N7: (63.020,111.040,15.269)
N9: (61.700,112.703,14.525)
O5': (63.817,115.031,16.647)
O3': (60.404,116.612,16.534)
C2: (56.895,103.021,14.691)
OP1: (53.221,110.721,14.460)
OP2: (52.344,108.303,14.438)
C4: (54.751,102.145,14.440)
O5': (54.748,108.814,14.892)
C3': (57.139,106.719,12.912)
C1': (57.247,105.475,14.909)
O4': (56.454,106.628,15.157)
C5': (55.217,108.137,13.745)
P: (53.254,109.336,15.001)
O2: (58.124,102.882,14.777)
C4': (56.565,107.547,14.040)
C2': (58.070,105.774,13.653)
O2': (59.262,106.403,14.055)
N1: (56.343,104.311,14.762)
N3: (56.072,101.960,14.530)
N4: (53.984,101.071,14.249)
C6: (54.985,104.483,14.687)
C5: (54.161,103.440,14.531)
O3': (57.787,107.571,11.972)
OP1: (53.221,110.721,14.460)
OP2: (52.344,108.303,14.438)
C4: (54.751,102.145,14.440)
O5': (54.748,108.814,14.892)
C3': (57.139,106.719,12.912)
C1': (57.247,105.475,14.909)
O4': (56.454,106.628,15.157)
C5': (55.217,108.137,13.745)
P: (53.254,109.336,15.001)
O2: (58.124,102.882,14.777)
C4': (56.565,107.547,14.040)
C2': (58.070,105.774,13.653)
O2': (59.262,106.403,14.055)
N1: (56.343,104.311,14.762)
N3: (56.072,101.960,14.530)
N4: (53.984,101.071,14.249)
C6: (54.985,104.483,14.687)
C5: (54.161,103.440,14.531)
O3': (57.787,107.571,11.972)
Image (generated by PyMOL):