Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:02716:02719
Extra
PDB:
ATOM 1 O3' G A2715 108.746 201.564 115.367 1.00 76.24 O
ATOM 2 P G A2716 109.438 202.928 114.859 1.00 77.56 P
ATOM 3 OP1 G A2716 110.780 202.562 114.342 1.00 76.17 O
ATOM 4 OP2 G A2716 109.313 203.960 115.920 1.00 78.64 O
ATOM 5 O5' G A2716 108.546 203.397 113.628 1.00 77.43 O
ATOM 6 C5' G A2716 108.684 202.775 112.341 1.00 76.94 C
ATOM 7 C4' G A2716 107.614 203.277 111.412 1.00 76.57 C
ATOM 8 O4' G A2716 106.317 202.912 111.948 1.00 75.59 O
ATOM 9 C3' G A2716 107.535 204.787 111.288 1.00 77.93 C
ATOM 10 O3' G A2716 108.502 205.308 110.383 1.00 80.75 O
ATOM 11 C2' G A2716 106.101 204.999 110.824 1.00 76.84 C
ATOM 12 O2' G A2716 105.904 204.786 109.439 1.00 77.72 O
ATOM 13 C1' G A2716 105.372 203.919 111.627 1.00 75.65 C
ATOM 14 N9 G A2716 104.808 204.452 112.862 1.00 74.13 N
ATOM 15 C8 G A2716 105.244 204.252 114.150 1.00 73.34 C
ATOM 16 N7 G A2716 104.538 204.904 115.032 1.00 73.33 N
ATOM 17 C5 G A2716 103.575 205.566 114.281 1.00 72.58 C
ATOM 18 C6 G A2716 102.530 206.440 114.682 1.00 73.19 C
ATOM 19 O6 G A2716 102.229 206.814 115.825 1.00 74.44 O
ATOM 20 N1 G A2716 101.798 206.893 113.589 1.00 72.71 N
ATOM 21 C2 G A2716 102.039 206.552 112.280 1.00 72.46 C
ATOM 22 N2 G A2716 101.237 207.102 111.359 1.00 72.54 N
ATOM 23 N3 G A2716 102.999 205.736 111.899 1.00 72.39 N
ATOM 24 C4 G A2716 103.725 205.287 112.943 1.00 72.97 C
ATOM 25 P U A2717 109.382 206.582 110.812 1.00 81.67 P
ATOM 26 OP1 U A2717 110.037 207.102 109.584 1.00 81.19 O
ATOM 27 OP2 U A2717 110.214 206.174 111.978 1.00 81.07 O
ATOM 28 O5' U A2717 108.296 207.653 111.285 1.00 82.32 O
TER
ATOM 1 O3' A B2718 99.970 210.762 110.292 1.00 83.38 O
ATOM 2 P A B2719 98.713 209.782 110.515 1.00 84.41 P
ATOM 3 OP1 A B2719 97.529 210.653 110.753 1.00 83.98 O
ATOM 4 OP2 A B2719 99.086 208.758 111.524 1.00 84.01 O
ATOM 5 O5' A B2719 98.530 209.053 109.109 1.00 82.08 O
ATOM 6 C5' A B2719 97.947 209.743 107.989 1.00 81.05 C
ATOM 7 C4' A B2719 97.917 208.837 106.785 1.00 81.13 C
ATOM 8 O4' A B2719 99.278 208.450 106.458 1.00 81.12 O
ATOM 9 C3' A B2719 97.197 207.512 106.984 1.00 81.04 C
ATOM 10 O3' A B2719 95.784 207.634 106.829 1.00 80.99 O
ATOM 11 C2' A B2719 97.842 206.638 105.915 1.00 81.13 C
ATOM 12 O2' A B2719 97.348 206.865 104.608 1.00 80.86 O
ATOM 13 C1' A B2719 99.295 207.109 105.990 1.00 80.55 C
ATOM 14 N9 A B2719 100.087 206.309 106.925 1.00 79.58 N
ATOM 15 C8 A B2719 100.327 206.552 108.256 1.00 79.42 C
ATOM 16 N7 A B2719 101.067 205.639 108.835 1.00 79.51 N
ATOM 17 C5 A B2719 101.335 204.733 107.818 1.00 79.42 C
ATOM 18 C6 A B2719 102.077 203.536 107.786 1.00 79.27 C
ATOM 19 N6 A B2719 102.702 203.022 108.848 1.00 78.70 N
ATOM 20 N1 A B2719 102.153 202.877 106.610 1.00 79.00 N
ATOM 21 C2 A B2719 101.522 203.390 105.546 1.00 79.22 C
ATOM 22 N3 A B2719 100.794 204.501 105.451 1.00 79.37 N
ATOM 23 C4 A B2719 100.740 205.135 106.636 1.00 79.52 C
ATOM 24 P C B2720 94.795 206.936 107.894 1.00 80.91 P
ATOM 25 OP1 C B2720 93.472 206.817 107.233 1.00 80.65 O
ATOM 26 OP2 C B2720 94.902 207.640 109.201 1.00 80.42 O
ATOM 27 O5' C B2720 95.382 205.465 108.075 1.00 79.27 O
TER
ATOM 2 P G A2716 109.438 202.928 114.859 1.00 77.56 P
ATOM 3 OP1 G A2716 110.780 202.562 114.342 1.00 76.17 O
ATOM 4 OP2 G A2716 109.313 203.960 115.920 1.00 78.64 O
ATOM 5 O5' G A2716 108.546 203.397 113.628 1.00 77.43 O
ATOM 6 C5' G A2716 108.684 202.775 112.341 1.00 76.94 C
ATOM 7 C4' G A2716 107.614 203.277 111.412 1.00 76.57 C
ATOM 8 O4' G A2716 106.317 202.912 111.948 1.00 75.59 O
ATOM 9 C3' G A2716 107.535 204.787 111.288 1.00 77.93 C
ATOM 10 O3' G A2716 108.502 205.308 110.383 1.00 80.75 O
ATOM 11 C2' G A2716 106.101 204.999 110.824 1.00 76.84 C
ATOM 12 O2' G A2716 105.904 204.786 109.439 1.00 77.72 O
ATOM 13 C1' G A2716 105.372 203.919 111.627 1.00 75.65 C
ATOM 14 N9 G A2716 104.808 204.452 112.862 1.00 74.13 N
ATOM 15 C8 G A2716 105.244 204.252 114.150 1.00 73.34 C
ATOM 16 N7 G A2716 104.538 204.904 115.032 1.00 73.33 N
ATOM 17 C5 G A2716 103.575 205.566 114.281 1.00 72.58 C
ATOM 18 C6 G A2716 102.530 206.440 114.682 1.00 73.19 C
ATOM 19 O6 G A2716 102.229 206.814 115.825 1.00 74.44 O
ATOM 20 N1 G A2716 101.798 206.893 113.589 1.00 72.71 N
ATOM 21 C2 G A2716 102.039 206.552 112.280 1.00 72.46 C
ATOM 22 N2 G A2716 101.237 207.102 111.359 1.00 72.54 N
ATOM 23 N3 G A2716 102.999 205.736 111.899 1.00 72.39 N
ATOM 24 C4 G A2716 103.725 205.287 112.943 1.00 72.97 C
ATOM 25 P U A2717 109.382 206.582 110.812 1.00 81.67 P
ATOM 26 OP1 U A2717 110.037 207.102 109.584 1.00 81.19 O
ATOM 27 OP2 U A2717 110.214 206.174 111.978 1.00 81.07 O
ATOM 28 O5' U A2717 108.296 207.653 111.285 1.00 82.32 O
TER
ATOM 1 O3' A B2718 99.970 210.762 110.292 1.00 83.38 O
ATOM 2 P A B2719 98.713 209.782 110.515 1.00 84.41 P
ATOM 3 OP1 A B2719 97.529 210.653 110.753 1.00 83.98 O
ATOM 4 OP2 A B2719 99.086 208.758 111.524 1.00 84.01 O
ATOM 5 O5' A B2719 98.530 209.053 109.109 1.00 82.08 O
ATOM 6 C5' A B2719 97.947 209.743 107.989 1.00 81.05 C
ATOM 7 C4' A B2719 97.917 208.837 106.785 1.00 81.13 C
ATOM 8 O4' A B2719 99.278 208.450 106.458 1.00 81.12 O
ATOM 9 C3' A B2719 97.197 207.512 106.984 1.00 81.04 C
ATOM 10 O3' A B2719 95.784 207.634 106.829 1.00 80.99 O
ATOM 11 C2' A B2719 97.842 206.638 105.915 1.00 81.13 C
ATOM 12 O2' A B2719 97.348 206.865 104.608 1.00 80.86 O
ATOM 13 C1' A B2719 99.295 207.109 105.990 1.00 80.55 C
ATOM 14 N9 A B2719 100.087 206.309 106.925 1.00 79.58 N
ATOM 15 C8 A B2719 100.327 206.552 108.256 1.00 79.42 C
ATOM 16 N7 A B2719 101.067 205.639 108.835 1.00 79.51 N
ATOM 17 C5 A B2719 101.335 204.733 107.818 1.00 79.42 C
ATOM 18 C6 A B2719 102.077 203.536 107.786 1.00 79.27 C
ATOM 19 N6 A B2719 102.702 203.022 108.848 1.00 78.70 N
ATOM 20 N1 A B2719 102.153 202.877 106.610 1.00 79.00 N
ATOM 21 C2 A B2719 101.522 203.390 105.546 1.00 79.22 C
ATOM 22 N3 A B2719 100.794 204.501 105.451 1.00 79.37 N
ATOM 23 C4 A B2719 100.740 205.135 106.636 1.00 79.52 C
ATOM 24 P C B2720 94.795 206.936 107.894 1.00 80.91 P
ATOM 25 OP1 C B2720 93.472 206.817 107.233 1.00 80.65 O
ATOM 26 OP2 C B2720 94.902 207.640 109.201 1.00 80.42 O
ATOM 27 O5' C B2720 95.382 205.465 108.075 1.00 79.27 O
TER
Atoms:
OP1: (110.780,202.562,114.342)
OP2: (109.313,203.960,115.920)
C3': (107.535,204.787,111.288)
C1': (105.372,203.919,111.627)
C5': (108.684,202.775,112.341)
O6: (102.229,206.814,115.825)
O4': (106.317,202.912,111.948)
C8: (105.244,204.252,114.150)
C2: (102.039,206.552,112.280)
C6: (102.530,206.440,114.682)
C5: (103.575,205.566,114.281)
C4: (103.725,205.287,112.943)
P: (109.438,202.928,114.859)
C4': (107.614,203.277,111.412)
C2': (106.101,204.999,110.824)
O2': (105.904,204.786,109.439)
N1: (101.798,206.893,113.589)
N2: (101.237,207.102,111.359)
N3: (102.999,205.736,111.899)
N7: (104.538,204.904,115.032)
N9: (104.808,204.452,112.862)
O5': (108.546,203.397,113.628)
O3': (108.502,205.308,110.383)
OP2: (109.313,203.960,115.920)
C3': (107.535,204.787,111.288)
C1': (105.372,203.919,111.627)
C5': (108.684,202.775,112.341)
O6: (102.229,206.814,115.825)
O4': (106.317,202.912,111.948)
C8: (105.244,204.252,114.150)
C2: (102.039,206.552,112.280)
C6: (102.530,206.440,114.682)
C5: (103.575,205.566,114.281)
C4: (103.725,205.287,112.943)
P: (109.438,202.928,114.859)
C4': (107.614,203.277,111.412)
C2': (106.101,204.999,110.824)
O2': (105.904,204.786,109.439)
N1: (101.798,206.893,113.589)
N2: (101.237,207.102,111.359)
N3: (102.999,205.736,111.899)
N7: (104.538,204.904,115.032)
N9: (104.808,204.452,112.862)
O5': (108.546,203.397,113.628)
O3': (108.502,205.308,110.383)
OP1: (97.529,210.653,110.753)
OP2: (99.086,208.758,111.524)
C3': (97.197,207.512,106.984)
C1': (99.295,207.109,105.990)
C5': (97.947,209.743,107.989)
O4': (99.278,208.450,106.458)
C8: (100.327,206.552,108.256)
O2': (97.348,206.865,104.608)
C6: (102.077,203.536,107.786)
C5: (101.335,204.733,107.818)
C4: (100.740,205.135,106.636)
P: (98.713,209.782,110.515)
C4': (97.917,208.837,106.785)
C2': (97.842,206.638,105.915)
C2: (101.522,203.390,105.546)
N1: (102.153,202.877,106.610)
N3: (100.794,204.501,105.451)
N6: (102.702,203.022,108.848)
N7: (101.067,205.639,108.835)
N9: (100.087,206.309,106.925)
O5': (98.530,209.053,109.109)
O3': (95.784,207.634,106.829)
OP2: (99.086,208.758,111.524)
C3': (97.197,207.512,106.984)
C1': (99.295,207.109,105.990)
C5': (97.947,209.743,107.989)
O4': (99.278,208.450,106.458)
C8: (100.327,206.552,108.256)
O2': (97.348,206.865,104.608)
C6: (102.077,203.536,107.786)
C5: (101.335,204.733,107.818)
C4: (100.740,205.135,106.636)
P: (98.713,209.782,110.515)
C4': (97.917,208.837,106.785)
C2': (97.842,206.638,105.915)
C2: (101.522,203.390,105.546)
N1: (102.153,202.877,106.610)
N3: (100.794,204.501,105.451)
N6: (102.702,203.022,108.848)
N7: (101.067,205.639,108.835)
N9: (100.087,206.309,106.925)
O5': (98.530,209.053,109.109)
O3': (95.784,207.634,106.829)
Image (generated by PyMOL):