Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ4:0257:0230
Extra
PDB:
ATOM 1 O3' U A 256 80.434 108.817 -4.303 1.00 62.88 O
ATOM 2 P G A 257 79.150 108.471 -3.402 1.00 63.73 P
ATOM 3 OP1 G A 257 78.240 107.559 -4.144 1.00 61.63 O
ATOM 4 OP2 G A 257 78.629 109.767 -2.893 1.00 64.60 O
ATOM 5 O5' G A 257 79.756 107.659 -2.177 1.00 62.42 O
ATOM 6 C5' G A 257 80.539 106.473 -2.379 1.00 61.44 C
ATOM 7 C4' G A 257 81.228 106.102 -1.090 1.00 63.03 C
ATOM 8 O4' G A 257 82.227 107.109 -0.763 1.00 62.34 O
ATOM 9 C3' G A 257 80.294 106.082 0.108 1.00 63.19 C
ATOM 10 O3' G A 257 79.610 104.839 0.193 1.00 66.16 O
ATOM 11 C2' G A 257 81.233 106.373 1.275 1.00 62.25 C
ATOM 12 O2' G A 257 81.941 105.241 1.746 1.00 62.41 O
ATOM 13 C1' G A 257 82.204 107.372 0.632 1.00 59.24 C
ATOM 14 N9 G A 257 81.826 108.772 0.815 1.00 52.79 N
ATOM 15 C8 G A 257 80.742 109.420 0.271 1.00 50.92 C
ATOM 16 N7 G A 257 80.667 110.673 0.625 1.00 48.86 N
ATOM 17 C5 G A 257 81.767 110.864 1.447 1.00 46.21 C
ATOM 18 C6 G A 257 82.206 112.015 2.128 1.00 45.53 C
ATOM 19 O6 G A 257 81.699 113.143 2.140 1.00 44.58 O
ATOM 20 N1 G A 257 83.364 111.766 2.855 1.00 43.98 N
ATOM 21 C2 G A 257 84.012 110.559 2.917 1.00 44.07 C
ATOM 22 N2 G A 257 85.110 110.504 3.683 1.00 43.12 N
ATOM 23 N3 G A 257 83.614 109.481 2.280 1.00 46.04 N
ATOM 24 C4 G A 257 82.492 109.702 1.572 1.00 47.70 C
ATOM 25 P U A 258 78.106 104.790 0.755 1.00 67.77 P
ATOM 26 OP1 U A 258 77.454 103.593 0.165 1.00 67.85 O
ATOM 27 OP2 U A 258 77.482 106.128 0.570 1.00 66.71 O
ATOM 28 O5' U A 258 78.320 104.533 2.311 1.00 68.33 O
TER
ATOM 1 O3' A B 229 89.834 112.095 7.179 1.00 57.98 O
ATOM 2 P A B 230 90.294 112.167 5.645 1.00 55.97 P
ATOM 3 OP1 A B 230 91.526 112.994 5.610 1.00 56.55 O
ATOM 4 OP2 A B 230 89.105 112.571 4.845 1.00 54.71 O
ATOM 5 O5' A B 230 90.661 110.657 5.300 1.00 53.31 O
ATOM 6 C5' A B 230 91.706 109.978 6.016 1.00 52.99 C
ATOM 7 C4' A B 230 91.667 108.496 5.725 1.00 53.37 C
ATOM 8 O4' A B 230 90.403 107.950 6.179 1.00 52.85 O
ATOM 9 C3' A B 230 91.713 108.082 4.264 1.00 54.36 C
ATOM 10 O3' A B 230 93.036 108.118 3.732 1.00 56.90 O
ATOM 11 C2' A B 230 91.148 106.670 4.326 1.00 53.46 C
ATOM 12 O2' A B 230 92.092 105.730 4.814 1.00 52.04 O
ATOM 13 C1' A B 230 90.042 106.845 5.366 1.00 51.16 C
ATOM 14 N9 A B 230 88.715 107.100 4.805 1.00 49.91 N
ATOM 15 C8 A B 230 88.144 108.307 4.471 1.00 49.91 C
ATOM 16 N7 A B 230 86.910 108.206 4.034 1.00 48.37 N
ATOM 17 C5 A B 230 86.653 106.844 4.073 1.00 47.31 C
ATOM 18 C6 A B 230 85.512 106.091 3.750 1.00 47.32 C
ATOM 19 N6 A B 230 84.375 106.625 3.296 1.00 48.12 N
ATOM 20 N1 A B 230 85.578 104.751 3.909 1.00 47.36 N
ATOM 21 C2 A B 230 86.727 104.214 4.361 1.00 49.49 C
ATOM 22 N3 A B 230 87.868 104.818 4.698 1.00 47.13 N
ATOM 23 C4 A B 230 87.761 106.148 4.533 1.00 48.91 C
ATOM 24 P A B 231 93.264 108.524 2.188 1.00 59.17 P
ATOM 25 OP1 A B 231 94.715 108.846 2.053 1.00 55.65 O
ATOM 26 OP2 A B 231 92.238 109.525 1.757 1.00 54.13 O
ATOM 27 O5' A B 231 92.949 107.178 1.395 1.00 59.04 O
TER
ATOM 2 P G A 257 79.150 108.471 -3.402 1.00 63.73 P
ATOM 3 OP1 G A 257 78.240 107.559 -4.144 1.00 61.63 O
ATOM 4 OP2 G A 257 78.629 109.767 -2.893 1.00 64.60 O
ATOM 5 O5' G A 257 79.756 107.659 -2.177 1.00 62.42 O
ATOM 6 C5' G A 257 80.539 106.473 -2.379 1.00 61.44 C
ATOM 7 C4' G A 257 81.228 106.102 -1.090 1.00 63.03 C
ATOM 8 O4' G A 257 82.227 107.109 -0.763 1.00 62.34 O
ATOM 9 C3' G A 257 80.294 106.082 0.108 1.00 63.19 C
ATOM 10 O3' G A 257 79.610 104.839 0.193 1.00 66.16 O
ATOM 11 C2' G A 257 81.233 106.373 1.275 1.00 62.25 C
ATOM 12 O2' G A 257 81.941 105.241 1.746 1.00 62.41 O
ATOM 13 C1' G A 257 82.204 107.372 0.632 1.00 59.24 C
ATOM 14 N9 G A 257 81.826 108.772 0.815 1.00 52.79 N
ATOM 15 C8 G A 257 80.742 109.420 0.271 1.00 50.92 C
ATOM 16 N7 G A 257 80.667 110.673 0.625 1.00 48.86 N
ATOM 17 C5 G A 257 81.767 110.864 1.447 1.00 46.21 C
ATOM 18 C6 G A 257 82.206 112.015 2.128 1.00 45.53 C
ATOM 19 O6 G A 257 81.699 113.143 2.140 1.00 44.58 O
ATOM 20 N1 G A 257 83.364 111.766 2.855 1.00 43.98 N
ATOM 21 C2 G A 257 84.012 110.559 2.917 1.00 44.07 C
ATOM 22 N2 G A 257 85.110 110.504 3.683 1.00 43.12 N
ATOM 23 N3 G A 257 83.614 109.481 2.280 1.00 46.04 N
ATOM 24 C4 G A 257 82.492 109.702 1.572 1.00 47.70 C
ATOM 25 P U A 258 78.106 104.790 0.755 1.00 67.77 P
ATOM 26 OP1 U A 258 77.454 103.593 0.165 1.00 67.85 O
ATOM 27 OP2 U A 258 77.482 106.128 0.570 1.00 66.71 O
ATOM 28 O5' U A 258 78.320 104.533 2.311 1.00 68.33 O
TER
ATOM 1 O3' A B 229 89.834 112.095 7.179 1.00 57.98 O
ATOM 2 P A B 230 90.294 112.167 5.645 1.00 55.97 P
ATOM 3 OP1 A B 230 91.526 112.994 5.610 1.00 56.55 O
ATOM 4 OP2 A B 230 89.105 112.571 4.845 1.00 54.71 O
ATOM 5 O5' A B 230 90.661 110.657 5.300 1.00 53.31 O
ATOM 6 C5' A B 230 91.706 109.978 6.016 1.00 52.99 C
ATOM 7 C4' A B 230 91.667 108.496 5.725 1.00 53.37 C
ATOM 8 O4' A B 230 90.403 107.950 6.179 1.00 52.85 O
ATOM 9 C3' A B 230 91.713 108.082 4.264 1.00 54.36 C
ATOM 10 O3' A B 230 93.036 108.118 3.732 1.00 56.90 O
ATOM 11 C2' A B 230 91.148 106.670 4.326 1.00 53.46 C
ATOM 12 O2' A B 230 92.092 105.730 4.814 1.00 52.04 O
ATOM 13 C1' A B 230 90.042 106.845 5.366 1.00 51.16 C
ATOM 14 N9 A B 230 88.715 107.100 4.805 1.00 49.91 N
ATOM 15 C8 A B 230 88.144 108.307 4.471 1.00 49.91 C
ATOM 16 N7 A B 230 86.910 108.206 4.034 1.00 48.37 N
ATOM 17 C5 A B 230 86.653 106.844 4.073 1.00 47.31 C
ATOM 18 C6 A B 230 85.512 106.091 3.750 1.00 47.32 C
ATOM 19 N6 A B 230 84.375 106.625 3.296 1.00 48.12 N
ATOM 20 N1 A B 230 85.578 104.751 3.909 1.00 47.36 N
ATOM 21 C2 A B 230 86.727 104.214 4.361 1.00 49.49 C
ATOM 22 N3 A B 230 87.868 104.818 4.698 1.00 47.13 N
ATOM 23 C4 A B 230 87.761 106.148 4.533 1.00 48.91 C
ATOM 24 P A B 231 93.264 108.524 2.188 1.00 59.17 P
ATOM 25 OP1 A B 231 94.715 108.846 2.053 1.00 55.65 O
ATOM 26 OP2 A B 231 92.238 109.525 1.757 1.00 54.13 O
ATOM 27 O5' A B 231 92.949 107.178 1.395 1.00 59.04 O
TER
Atoms:
OP1: (78.240,107.559,-4.144)
OP2: (78.629,109.767,-2.893)
C3': (80.294,106.082,0.108)
C1': (82.204,107.372,0.632)
C5': (80.539,106.473,-2.379)
O6: (81.699,113.143,2.140)
O4': (82.227,107.109,-0.763)
C8: (80.742,109.420,0.271)
C2: (84.012,110.559,2.917)
C6: (82.206,112.015,2.128)
C5: (81.767,110.864,1.447)
C4: (82.492,109.702,1.572)
P: (79.150,108.471,-3.402)
C4': (81.228,106.102,-1.090)
C2': (81.233,106.373,1.275)
O2': (81.941,105.241,1.746)
N1: (83.364,111.766,2.855)
N2: (85.110,110.504,3.683)
N3: (83.614,109.481,2.280)
N7: (80.667,110.673,0.625)
N9: (81.826,108.772,0.815)
O5': (79.756,107.659,-2.177)
O3': (79.610,104.839,0.193)
OP2: (78.629,109.767,-2.893)
C3': (80.294,106.082,0.108)
C1': (82.204,107.372,0.632)
C5': (80.539,106.473,-2.379)
O6: (81.699,113.143,2.140)
O4': (82.227,107.109,-0.763)
C8: (80.742,109.420,0.271)
C2: (84.012,110.559,2.917)
C6: (82.206,112.015,2.128)
C5: (81.767,110.864,1.447)
C4: (82.492,109.702,1.572)
P: (79.150,108.471,-3.402)
C4': (81.228,106.102,-1.090)
C2': (81.233,106.373,1.275)
O2': (81.941,105.241,1.746)
N1: (83.364,111.766,2.855)
N2: (85.110,110.504,3.683)
N3: (83.614,109.481,2.280)
N7: (80.667,110.673,0.625)
N9: (81.826,108.772,0.815)
O5': (79.756,107.659,-2.177)
O3': (79.610,104.839,0.193)
OP1: (91.526,112.994,5.610)
OP2: (89.105,112.571,4.845)
C3': (91.713,108.082,4.264)
C1': (90.042,106.845,5.366)
C5': (91.706,109.978,6.016)
O4': (90.403,107.950,6.179)
C8: (88.144,108.307,4.471)
O2': (92.092,105.730,4.814)
C6: (85.512,106.091,3.750)
C5: (86.653,106.844,4.073)
C4: (87.761,106.148,4.533)
P: (90.294,112.167,5.645)
C4': (91.667,108.496,5.725)
C2': (91.148,106.670,4.326)
C2: (86.727,104.214,4.361)
N1: (85.578,104.751,3.909)
N3: (87.868,104.818,4.698)
N6: (84.375,106.625,3.296)
N7: (86.910,108.206,4.034)
N9: (88.715,107.100,4.805)
O5': (90.661,110.657,5.300)
O3': (93.036,108.118,3.732)
OP2: (89.105,112.571,4.845)
C3': (91.713,108.082,4.264)
C1': (90.042,106.845,5.366)
C5': (91.706,109.978,6.016)
O4': (90.403,107.950,6.179)
C8: (88.144,108.307,4.471)
O2': (92.092,105.730,4.814)
C6: (85.512,106.091,3.750)
C5: (86.653,106.844,4.073)
C4: (87.761,106.148,4.533)
P: (90.294,112.167,5.645)
C4': (91.667,108.496,5.725)
C2': (91.148,106.670,4.326)
C2: (86.727,104.214,4.361)
N1: (85.578,104.751,3.909)
N3: (87.868,104.818,4.698)
N6: (84.375,106.625,3.296)
N7: (86.910,108.206,4.034)
N9: (88.715,107.100,4.805)
O5': (90.661,110.657,5.300)
O3': (93.036,108.118,3.732)
Image (generated by PyMOL):