Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3SKZ:A21:A47
Extra
PDB:
ATOM 1 O3' A A 20 5.933 9.284 -25.052 1.00 61.50 O
ATOM 2 P A A 21 4.618 9.605 -24.189 1.00 62.83 P
ATOM 3 OP1 A A 21 4.589 11.067 -23.982 1.00 66.75 O
ATOM 4 OP2 A A 21 4.640 8.716 -23.000 1.00 64.55 O
ATOM 5 O5' A A 21 3.436 9.176 -25.167 1.00 65.21 O
ATOM 6 C5' A A 21 3.166 9.917 -26.354 1.00 55.82 C
ATOM 7 C4' A A 21 1.724 9.794 -26.784 1.00 47.31 C
ATOM 8 O4' A A 21 1.444 8.416 -27.154 1.00 43.06 O
ATOM 9 C3' A A 21 0.685 10.173 -25.729 1.00 51.17 C
ATOM 10 O3' A A 21 -0.400 10.850 -26.365 1.00 59.03 O
ATOM 11 C2' A A 21 0.213 8.809 -25.212 1.00 50.37 C
ATOM 12 O2' A A 21 -1.087 8.799 -24.643 1.00 52.78 O
ATOM 13 C1' A A 21 0.284 7.974 -26.482 1.00 41.26 C
ATOM 14 N9 A A 21 0.405 6.537 -26.256 1.00 40.86 N
ATOM 15 C8 A A 21 1.557 5.843 -26.023 1.00 47.13 C
ATOM 16 N7 A A 21 1.370 4.558 -25.862 1.00 45.73 N
ATOM 17 C5 A A 21 0.009 4.392 -26.008 1.00 36.38 C
ATOM 18 C6 A A 21 -0.799 3.250 -25.948 1.00 39.12 C
ATOM 19 N6 A A 21 -0.307 2.036 -25.725 1.00 18.84 N
ATOM 20 N1 A A 21 -2.131 3.397 -26.139 1.00 40.94 N
ATOM 21 C2 A A 21 -2.586 4.638 -26.371 1.00 44.16 C
ATOM 22 N3 A A 21 -1.919 5.796 -26.447 1.00 44.66 N
ATOM 23 C4 A A 21 -0.604 5.603 -26.258 1.00 40.12 C
ATOM 24 P U A 22 -0.357 12.447 -26.556 1.00 98.31 P
ATOM 25 OP1 U A 22 0.915 12.925 -25.959 1.00 96.57 O
ATOM 26 OP2 U A 22 -1.634 12.980 -26.032 1.00100.38 O
ATOM 27 O5' U A 22 -0.305 12.621 -28.137 1.00103.95 O
TER
ATOM 1 O3' C B 46 -6.976 -3.998 -27.812 1.00 48.68 O
ATOM 2 P C B 47 -6.716 -3.549 -26.283 1.00 51.14 P
ATOM 3 OP1 C B 47 -7.227 -4.641 -25.430 1.00 43.13 O
ATOM 4 OP2 C B 47 -7.267 -2.181 -26.109 1.00 49.47 O
ATOM 5 O5' C B 47 -5.136 -3.497 -26.210 1.00 56.73 O
ATOM 6 C5' C B 47 -4.353 -4.042 -27.263 1.00 56.66 C
ATOM 7 C4' C B 47 -3.071 -3.284 -27.453 1.00 55.72 C
ATOM 8 O4' C B 47 -3.303 -2.131 -28.319 1.00 49.32 O
ATOM 9 C3' C B 47 -2.425 -2.743 -26.164 1.00 61.28 C
ATOM 10 O3' C B 47 -1.019 -3.013 -26.181 1.00 34.18 O
ATOM 11 C2' C B 47 -2.666 -1.235 -26.263 1.00 59.76 C
ATOM 12 O2' C B 47 -1.712 -0.434 -25.603 1.00 59.53 O
ATOM 13 C1' C B 47 -2.631 -1.021 -27.772 1.00 55.17 C
ATOM 14 N1 C B 47 -3.281 0.223 -28.206 1.00 49.60 N
ATOM 15 C2 C B 47 -2.441 1.234 -28.697 1.00 48.56 C
ATOM 16 O2 C B 47 -1.224 1.038 -28.836 1.00 33.78 O
ATOM 17 N3 C B 47 -2.977 2.411 -29.059 1.00 52.18 N
ATOM 18 C4 C B 47 -4.285 2.593 -28.919 1.00 50.14 C
ATOM 19 N4 C B 47 -4.773 3.775 -29.293 1.00 48.88 N
ATOM 20 C5 C B 47 -5.149 1.589 -28.396 1.00 47.32 C
ATOM 21 C6 C B 47 -4.612 0.425 -28.043 1.00 33.91 C
ATOM 22 P U B 48 -0.489 -4.484 -25.820 1.00117.05 P
ATOM 23 OP1 U B 48 -0.196 -5.169 -27.097 1.00115.82 O
ATOM 24 OP2 U B 48 -1.482 -5.088 -24.895 1.00118.59 O
ATOM 25 O5' U B 48 0.867 -4.191 -25.047 1.00 62.03 O
TER
ATOM 2 P A A 21 4.618 9.605 -24.189 1.00 62.83 P
ATOM 3 OP1 A A 21 4.589 11.067 -23.982 1.00 66.75 O
ATOM 4 OP2 A A 21 4.640 8.716 -23.000 1.00 64.55 O
ATOM 5 O5' A A 21 3.436 9.176 -25.167 1.00 65.21 O
ATOM 6 C5' A A 21 3.166 9.917 -26.354 1.00 55.82 C
ATOM 7 C4' A A 21 1.724 9.794 -26.784 1.00 47.31 C
ATOM 8 O4' A A 21 1.444 8.416 -27.154 1.00 43.06 O
ATOM 9 C3' A A 21 0.685 10.173 -25.729 1.00 51.17 C
ATOM 10 O3' A A 21 -0.400 10.850 -26.365 1.00 59.03 O
ATOM 11 C2' A A 21 0.213 8.809 -25.212 1.00 50.37 C
ATOM 12 O2' A A 21 -1.087 8.799 -24.643 1.00 52.78 O
ATOM 13 C1' A A 21 0.284 7.974 -26.482 1.00 41.26 C
ATOM 14 N9 A A 21 0.405 6.537 -26.256 1.00 40.86 N
ATOM 15 C8 A A 21 1.557 5.843 -26.023 1.00 47.13 C
ATOM 16 N7 A A 21 1.370 4.558 -25.862 1.00 45.73 N
ATOM 17 C5 A A 21 0.009 4.392 -26.008 1.00 36.38 C
ATOM 18 C6 A A 21 -0.799 3.250 -25.948 1.00 39.12 C
ATOM 19 N6 A A 21 -0.307 2.036 -25.725 1.00 18.84 N
ATOM 20 N1 A A 21 -2.131 3.397 -26.139 1.00 40.94 N
ATOM 21 C2 A A 21 -2.586 4.638 -26.371 1.00 44.16 C
ATOM 22 N3 A A 21 -1.919 5.796 -26.447 1.00 44.66 N
ATOM 23 C4 A A 21 -0.604 5.603 -26.258 1.00 40.12 C
ATOM 24 P U A 22 -0.357 12.447 -26.556 1.00 98.31 P
ATOM 25 OP1 U A 22 0.915 12.925 -25.959 1.00 96.57 O
ATOM 26 OP2 U A 22 -1.634 12.980 -26.032 1.00100.38 O
ATOM 27 O5' U A 22 -0.305 12.621 -28.137 1.00103.95 O
TER
ATOM 1 O3' C B 46 -6.976 -3.998 -27.812 1.00 48.68 O
ATOM 2 P C B 47 -6.716 -3.549 -26.283 1.00 51.14 P
ATOM 3 OP1 C B 47 -7.227 -4.641 -25.430 1.00 43.13 O
ATOM 4 OP2 C B 47 -7.267 -2.181 -26.109 1.00 49.47 O
ATOM 5 O5' C B 47 -5.136 -3.497 -26.210 1.00 56.73 O
ATOM 6 C5' C B 47 -4.353 -4.042 -27.263 1.00 56.66 C
ATOM 7 C4' C B 47 -3.071 -3.284 -27.453 1.00 55.72 C
ATOM 8 O4' C B 47 -3.303 -2.131 -28.319 1.00 49.32 O
ATOM 9 C3' C B 47 -2.425 -2.743 -26.164 1.00 61.28 C
ATOM 10 O3' C B 47 -1.019 -3.013 -26.181 1.00 34.18 O
ATOM 11 C2' C B 47 -2.666 -1.235 -26.263 1.00 59.76 C
ATOM 12 O2' C B 47 -1.712 -0.434 -25.603 1.00 59.53 O
ATOM 13 C1' C B 47 -2.631 -1.021 -27.772 1.00 55.17 C
ATOM 14 N1 C B 47 -3.281 0.223 -28.206 1.00 49.60 N
ATOM 15 C2 C B 47 -2.441 1.234 -28.697 1.00 48.56 C
ATOM 16 O2 C B 47 -1.224 1.038 -28.836 1.00 33.78 O
ATOM 17 N3 C B 47 -2.977 2.411 -29.059 1.00 52.18 N
ATOM 18 C4 C B 47 -4.285 2.593 -28.919 1.00 50.14 C
ATOM 19 N4 C B 47 -4.773 3.775 -29.293 1.00 48.88 N
ATOM 20 C5 C B 47 -5.149 1.589 -28.396 1.00 47.32 C
ATOM 21 C6 C B 47 -4.612 0.425 -28.043 1.00 33.91 C
ATOM 22 P U B 48 -0.489 -4.484 -25.820 1.00117.05 P
ATOM 23 OP1 U B 48 -0.196 -5.169 -27.097 1.00115.82 O
ATOM 24 OP2 U B 48 -1.482 -5.088 -24.895 1.00118.59 O
ATOM 25 O5' U B 48 0.867 -4.191 -25.047 1.00 62.03 O
TER
Atoms:
OP1: (4.589,11.067,-23.982)
OP2: (4.640,8.716,-23.000)
C3': (0.685,10.173,-25.729)
C1': (0.284,7.974,-26.482)
C5': (3.166,9.917,-26.354)
O4': (1.444,8.416,-27.154)
C8: (1.557,5.843,-26.023)
O2': (-1.087,8.799,-24.643)
C6: (-0.799,3.250,-25.948)
C5: (0.009,4.392,-26.008)
C4: (-0.604,5.603,-26.258)
P: (4.618,9.605,-24.189)
C4': (1.724,9.794,-26.784)
C2': (0.213,8.809,-25.212)
C2: (-2.586,4.638,-26.371)
N1: (-2.131,3.397,-26.139)
N3: (-1.919,5.796,-26.447)
N6: (-0.307,2.036,-25.725)
N7: (1.370,4.558,-25.862)
N9: (0.405,6.537,-26.256)
O5': (3.436,9.176,-25.167)
O3': (-0.400,10.850,-26.365)
OP2: (4.640,8.716,-23.000)
C3': (0.685,10.173,-25.729)
C1': (0.284,7.974,-26.482)
C5': (3.166,9.917,-26.354)
O4': (1.444,8.416,-27.154)
C8: (1.557,5.843,-26.023)
O2': (-1.087,8.799,-24.643)
C6: (-0.799,3.250,-25.948)
C5: (0.009,4.392,-26.008)
C4: (-0.604,5.603,-26.258)
P: (4.618,9.605,-24.189)
C4': (1.724,9.794,-26.784)
C2': (0.213,8.809,-25.212)
C2: (-2.586,4.638,-26.371)
N1: (-2.131,3.397,-26.139)
N3: (-1.919,5.796,-26.447)
N6: (-0.307,2.036,-25.725)
N7: (1.370,4.558,-25.862)
N9: (0.405,6.537,-26.256)
O5': (3.436,9.176,-25.167)
O3': (-0.400,10.850,-26.365)
C2: (-2.441,1.234,-28.697)
OP1: (-7.227,-4.641,-25.430)
OP2: (-7.267,-2.181,-26.109)
C4: (-4.285,2.593,-28.919)
O5': (-5.136,-3.497,-26.210)
C3': (-2.425,-2.743,-26.164)
C1': (-2.631,-1.021,-27.772)
O4': (-3.303,-2.131,-28.319)
C5': (-4.353,-4.042,-27.263)
P: (-6.716,-3.549,-26.283)
O2: (-1.224,1.038,-28.836)
C4': (-3.071,-3.284,-27.453)
C2': (-2.666,-1.235,-26.263)
O2': (-1.712,-0.434,-25.603)
N1: (-3.281,0.223,-28.206)
N3: (-2.977,2.411,-29.059)
N4: (-4.773,3.775,-29.293)
C6: (-4.612,0.425,-28.043)
C5: (-5.149,1.589,-28.396)
O3': (-1.019,-3.013,-26.181)
OP1: (-7.227,-4.641,-25.430)
OP2: (-7.267,-2.181,-26.109)
C4: (-4.285,2.593,-28.919)
O5': (-5.136,-3.497,-26.210)
C3': (-2.425,-2.743,-26.164)
C1': (-2.631,-1.021,-27.772)
O4': (-3.303,-2.131,-28.319)
C5': (-4.353,-4.042,-27.263)
P: (-6.716,-3.549,-26.283)
O2: (-1.224,1.038,-28.836)
C4': (-3.071,-3.284,-27.453)
C2': (-2.666,-1.235,-26.263)
O2': (-1.712,-0.434,-25.603)
N1: (-3.281,0.223,-28.206)
N3: (-2.977,2.411,-29.059)
N4: (-4.773,3.775,-29.293)
C6: (-4.612,0.425,-28.043)
C5: (-5.149,1.589,-28.396)
O3': (-1.019,-3.013,-26.181)
Image (generated by PyMOL):