ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQP:01866:01889

Extra

PDB:
ATOM 1 O3' U A1865 108.484 85.917 60.425 1.00 70.26 O
ATOM 2 P G A1866 108.056 86.129 58.891 1.00 70.73 P
ATOM 3 OP1 G A1866 106.659 85.631 58.750 1.00 70.44 O
ATOM 4 OP2 G A1866 109.125 85.581 58.013 1.00 69.83 O
ATOM 5 O5' G A1866 108.047 87.711 58.715 1.00 69.24 O
ATOM 6 C5' G A1866 107.004 88.516 59.301 1.00 66.72 C
ATOM 7 C4' G A1866 107.168 89.956 58.883 1.00 64.16 C
ATOM 8 O4' G A1866 108.386 90.488 59.467 1.00 63.42 O
ATOM 9 C3' G A1866 107.359 90.168 57.391 1.00 63.22 C
ATOM 10 O3' G A1866 106.132 90.157 56.672 1.00 60.99 O
ATOM 11 C2' G A1866 108.068 91.515 57.348 1.00 62.94 C
ATOM 12 O2' G A1866 107.196 92.615 57.508 1.00 63.07 O
ATOM 13 C1' G A1866 108.994 91.396 58.561 1.00 62.95 C
ATOM 14 N9 G A1866 110.300 90.862 58.185 1.00 62.91 N
ATOM 15 C8 G A1866 110.656 89.538 58.073 1.00 62.01 C
ATOM 16 N7 G A1866 111.884 89.373 57.667 1.00 62.25 N
ATOM 17 C5 G A1866 112.373 90.663 57.512 1.00 61.68 C
ATOM 18 C6 G A1866 113.644 91.117 57.085 1.00 61.91 C
ATOM 19 O6 G A1866 114.625 90.450 56.735 1.00 62.67 O
ATOM 20 N1 G A1866 113.714 92.506 57.083 1.00 62.51 N
ATOM 21 C2 G A1866 112.693 93.350 57.434 1.00 61.04 C
ATOM 22 N2 G A1866 112.961 94.660 57.370 1.00 60.82 N
ATOM 23 N3 G A1866 111.501 92.941 57.821 1.00 61.16 N
ATOM 24 C4 G A1866 111.411 91.594 57.839 1.00 61.83 C
ATOM 25 P A A1867 105.942 89.142 55.439 1.00 59.74 P
ATOM 26 OP1 A A1867 105.132 88.001 55.947 1.00 59.73 O
ATOM 27 OP2 A A1867 107.258 88.885 54.809 1.00 59.54 O
ATOM 28 O5' A A1867 105.059 89.958 54.394 1.00 58.81 O
TER

ATOM 1 O3' A B1888 115.627 98.510 55.570 1.00 57.45 O
ATOM 2 P A B1889 115.821 98.389 57.161 1.00 57.38 P
ATOM 3 OP1 A B1889 117.118 99.042 57.478 1.00 57.25 O
ATOM 4 OP2 A B1889 115.576 96.989 57.598 1.00 55.52 O
ATOM 5 O5' A B1889 114.651 99.286 57.758 1.00 56.57 O
ATOM 6 C5' A B1889 114.609 100.702 57.516 1.00 54.80 C
ATOM 7 C4' A B1889 113.234 101.238 57.822 1.00 54.71 C
ATOM 8 O4' A B1889 112.268 100.605 56.938 1.00 54.05 O
ATOM 9 C3' A B1889 112.702 100.931 59.214 1.00 54.31 C
ATOM 10 O3' A B1889 113.202 101.832 60.198 1.00 54.51 O
ATOM 11 C2' A B1889 111.203 101.071 59.003 1.00 53.35 C
ATOM 12 O2' A B1889 110.815 102.426 58.915 1.00 55.61 O
ATOM 13 C1' A B1889 111.041 100.418 57.628 1.00 53.38 C
ATOM 14 N9 A B1889 110.788 98.980 57.739 1.00 51.51 N
ATOM 15 C8 A B1889 111.713 97.962 57.786 1.00 50.66 C
ATOM 16 N7 A B1889 111.184 96.771 57.932 1.00 49.56 N
ATOM 17 C5 A B1889 109.819 97.016 57.974 1.00 49.03 C
ATOM 18 C6 A B1889 108.712 96.162 58.118 1.00 46.95 C
ATOM 19 N6 A B1889 108.810 94.842 58.250 1.00 46.22 N
ATOM 20 N1 A B1889 107.485 96.721 58.120 1.00 46.56 N
ATOM 21 C2 A B1889 107.387 98.054 57.984 1.00 47.14 C
ATOM 22 N3 A B1889 108.351 98.961 57.841 1.00 46.16 N
ATOM 23 C4 A B1889 109.559 98.371 57.846 1.00 49.66 C
ATOM 24 P G B1890 113.545 101.291 61.676 1.00 54.48 P
ATOM 25 OP1 G B1890 113.733 102.481 62.543 1.00 54.84 O
ATOM 26 OP2 G B1890 114.624 100.268 61.588 1.00 56.94 O
ATOM 27 O5' G B1890 112.209 100.558 62.137 1.00 55.23 O
TER

Atoms:
OP1: (106.659,85.631,58.750)
OP2: (109.125,85.581,58.013)
C3': (107.359,90.168,57.391)
C1': (108.994,91.396,58.561)
C5': (107.004,88.516,59.301)
O6: (114.625,90.450,56.735)
O4': (108.386,90.488,59.467)
C8: (110.656,89.538,58.073)
C2: (112.693,93.350,57.434)
C6: (113.644,91.117,57.085)
C5: (112.373,90.663,57.512)
C4: (111.411,91.594,57.839)
P: (108.056,86.129,58.891)
C4': (107.168,89.956,58.883)
C2': (108.068,91.515,57.348)
O2': (107.196,92.615,57.508)
N1: (113.714,92.506,57.083)
N2: (112.961,94.660,57.370)
N3: (111.501,92.941,57.821)
N7: (111.884,89.373,57.667)
N9: (110.300,90.862,58.185)
O5': (108.047,87.711,58.715)
O3': (106.132,90.157,56.672)
OP1: (117.118,99.042,57.478)
OP2: (115.576,96.989,57.598)
C3': (112.702,100.931,59.214)
C1': (111.041,100.418,57.628)
C5': (114.609,100.702,57.516)
O4': (112.268,100.605,56.938)
C8: (111.713,97.962,57.786)
O2': (110.815,102.426,58.915)
C6: (108.712,96.162,58.118)
C5: (109.819,97.016,57.974)
C4: (109.559,98.371,57.846)
P: (115.821,98.389,57.161)
C4': (113.234,101.238,57.822)
C2': (111.203,101.071,59.003)
C2: (107.387,98.054,57.984)
N1: (107.485,96.721,58.120)
N3: (108.351,98.961,57.841)
N6: (108.810,94.842,58.250)
N7: (111.184,96.771,57.932)
N9: (110.788,98.980,57.739)
O5': (114.651,99.286,57.758)
O3': (113.202,101.832,60.198)
Image (generated by PyMOL):
PyMOL image
show in jmol