Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:0184:0187
Extra
PDB:
ATOM 1 O3' C A 183 68.933 91.055 26.312 1.00 44.62 O
ATOM 2 P G A 184 69.302 89.824 27.271 1.00 45.26 P
ATOM 3 OP1 G A 184 68.278 89.796 28.340 1.00 45.13 O
ATOM 4 OP2 G A 184 70.743 89.907 27.627 1.00 43.21 O
ATOM 5 O5' G A 184 69.116 88.537 26.356 1.00 46.73 O
ATOM 6 C5' G A 184 67.816 88.082 25.934 1.00 48.18 C
ATOM 7 C4' G A 184 67.956 86.761 25.219 1.00 49.14 C
ATOM 8 O4' G A 184 68.830 86.952 24.066 1.00 49.66 O
ATOM 9 C3' G A 184 68.620 85.668 26.064 1.00 49.38 C
ATOM 10 O3' G A 184 68.181 84.390 25.609 1.00 50.89 O
ATOM 11 C2' G A 184 70.087 85.830 25.689 1.00 49.70 C
ATOM 12 O2' G A 184 70.911 84.714 25.977 1.00 45.49 O
ATOM 13 C1' G A 184 69.942 86.090 24.191 1.00 52.22 C
ATOM 14 N9 G A 184 71.096 86.643 23.486 1.00 55.66 N
ATOM 15 C8 G A 184 71.970 87.616 23.911 1.00 56.61 C
ATOM 16 N7 G A 184 72.958 87.814 23.080 1.00 56.85 N
ATOM 17 C5 G A 184 72.710 86.934 22.036 1.00 57.58 C
ATOM 18 C6 G A 184 73.449 86.680 20.853 1.00 57.82 C
ATOM 19 O6 G A 184 74.511 87.185 20.487 1.00 57.58 O
ATOM 20 N1 G A 184 72.831 85.716 20.063 1.00 59.24 N
ATOM 21 C2 G A 184 71.653 85.074 20.371 1.00 59.79 C
ATOM 22 N2 G A 184 71.203 84.179 19.473 1.00 60.46 N
ATOM 23 N3 G A 184 70.964 85.294 21.477 1.00 58.37 N
ATOM 24 C4 G A 184 71.548 86.227 22.259 1.00 57.35 C
ATOM 25 P C A 185 67.078 83.563 26.434 1.00 52.29 P
ATOM 26 OP1 C A 185 66.576 84.380 27.570 1.00 50.56 O
ATOM 27 OP2 C A 185 67.641 82.209 26.695 1.00 52.21 O
ATOM 28 O5' C A 185 65.900 83.409 25.382 1.00 48.75 O
TER
ATOM 1 O3' A B 186 67.174 77.987 21.683 1.00 60.70 O
ATOM 2 P A B 187 66.089 76.901 21.207 1.00 60.96 P
ATOM 3 OP1 A B 187 64.930 76.895 22.133 1.00 61.75 O
ATOM 4 OP2 A B 187 66.852 75.652 20.985 1.00 60.38 O
ATOM 5 O5' A B 187 65.564 77.464 19.813 1.00 60.58 O
ATOM 6 C5' A B 187 66.474 77.885 18.779 1.00 64.34 C
ATOM 7 C4' A B 187 65.829 78.959 17.931 1.00 68.22 C
ATOM 8 O4' A B 187 65.528 80.106 18.764 1.00 68.25 O
ATOM 9 C3' A B 187 66.671 79.520 16.793 1.00 70.10 C
ATOM 10 O3' A B 187 66.510 78.710 15.622 1.00 75.86 O
ATOM 11 C2' A B 187 66.066 80.904 16.577 1.00 68.78 C
ATOM 12 O2' A B 187 64.913 80.861 15.766 1.00 68.17 O
ATOM 13 C1' A B 187 65.645 81.292 17.999 1.00 67.79 C
ATOM 14 N9 A B 187 66.503 82.235 18.723 1.00 66.06 N
ATOM 15 C8 A B 187 67.869 82.393 18.672 1.00 65.59 C
ATOM 16 N7 A B 187 68.322 83.324 19.476 1.00 64.60 N
ATOM 17 C5 A B 187 67.179 83.817 20.094 1.00 63.48 C
ATOM 18 C6 A B 187 66.979 84.826 21.061 1.00 62.75 C
ATOM 19 N6 A B 187 67.964 85.553 21.597 1.00 62.97 N
ATOM 20 N1 A B 187 65.715 85.067 21.462 1.00 61.40 N
ATOM 21 C2 A B 187 64.726 84.345 20.924 1.00 62.61 C
ATOM 22 N3 A B 187 64.785 83.377 20.012 1.00 62.86 N
ATOM 23 C4 A B 187 66.055 83.159 19.636 1.00 63.59 C
ATOM 24 P C B 188 67.673 78.623 14.552 1.00 80.83 P
ATOM 25 OP1 C B 188 68.171 77.230 14.611 1.00 81.47 O
ATOM 26 OP2 C B 188 68.617 79.751 14.781 1.00 81.91 O
ATOM 27 O5' C B 188 66.869 78.840 13.198 1.00 80.55 O
TER
ATOM 2 P G A 184 69.302 89.824 27.271 1.00 45.26 P
ATOM 3 OP1 G A 184 68.278 89.796 28.340 1.00 45.13 O
ATOM 4 OP2 G A 184 70.743 89.907 27.627 1.00 43.21 O
ATOM 5 O5' G A 184 69.116 88.537 26.356 1.00 46.73 O
ATOM 6 C5' G A 184 67.816 88.082 25.934 1.00 48.18 C
ATOM 7 C4' G A 184 67.956 86.761 25.219 1.00 49.14 C
ATOM 8 O4' G A 184 68.830 86.952 24.066 1.00 49.66 O
ATOM 9 C3' G A 184 68.620 85.668 26.064 1.00 49.38 C
ATOM 10 O3' G A 184 68.181 84.390 25.609 1.00 50.89 O
ATOM 11 C2' G A 184 70.087 85.830 25.689 1.00 49.70 C
ATOM 12 O2' G A 184 70.911 84.714 25.977 1.00 45.49 O
ATOM 13 C1' G A 184 69.942 86.090 24.191 1.00 52.22 C
ATOM 14 N9 G A 184 71.096 86.643 23.486 1.00 55.66 N
ATOM 15 C8 G A 184 71.970 87.616 23.911 1.00 56.61 C
ATOM 16 N7 G A 184 72.958 87.814 23.080 1.00 56.85 N
ATOM 17 C5 G A 184 72.710 86.934 22.036 1.00 57.58 C
ATOM 18 C6 G A 184 73.449 86.680 20.853 1.00 57.82 C
ATOM 19 O6 G A 184 74.511 87.185 20.487 1.00 57.58 O
ATOM 20 N1 G A 184 72.831 85.716 20.063 1.00 59.24 N
ATOM 21 C2 G A 184 71.653 85.074 20.371 1.00 59.79 C
ATOM 22 N2 G A 184 71.203 84.179 19.473 1.00 60.46 N
ATOM 23 N3 G A 184 70.964 85.294 21.477 1.00 58.37 N
ATOM 24 C4 G A 184 71.548 86.227 22.259 1.00 57.35 C
ATOM 25 P C A 185 67.078 83.563 26.434 1.00 52.29 P
ATOM 26 OP1 C A 185 66.576 84.380 27.570 1.00 50.56 O
ATOM 27 OP2 C A 185 67.641 82.209 26.695 1.00 52.21 O
ATOM 28 O5' C A 185 65.900 83.409 25.382 1.00 48.75 O
TER
ATOM 1 O3' A B 186 67.174 77.987 21.683 1.00 60.70 O
ATOM 2 P A B 187 66.089 76.901 21.207 1.00 60.96 P
ATOM 3 OP1 A B 187 64.930 76.895 22.133 1.00 61.75 O
ATOM 4 OP2 A B 187 66.852 75.652 20.985 1.00 60.38 O
ATOM 5 O5' A B 187 65.564 77.464 19.813 1.00 60.58 O
ATOM 6 C5' A B 187 66.474 77.885 18.779 1.00 64.34 C
ATOM 7 C4' A B 187 65.829 78.959 17.931 1.00 68.22 C
ATOM 8 O4' A B 187 65.528 80.106 18.764 1.00 68.25 O
ATOM 9 C3' A B 187 66.671 79.520 16.793 1.00 70.10 C
ATOM 10 O3' A B 187 66.510 78.710 15.622 1.00 75.86 O
ATOM 11 C2' A B 187 66.066 80.904 16.577 1.00 68.78 C
ATOM 12 O2' A B 187 64.913 80.861 15.766 1.00 68.17 O
ATOM 13 C1' A B 187 65.645 81.292 17.999 1.00 67.79 C
ATOM 14 N9 A B 187 66.503 82.235 18.723 1.00 66.06 N
ATOM 15 C8 A B 187 67.869 82.393 18.672 1.00 65.59 C
ATOM 16 N7 A B 187 68.322 83.324 19.476 1.00 64.60 N
ATOM 17 C5 A B 187 67.179 83.817 20.094 1.00 63.48 C
ATOM 18 C6 A B 187 66.979 84.826 21.061 1.00 62.75 C
ATOM 19 N6 A B 187 67.964 85.553 21.597 1.00 62.97 N
ATOM 20 N1 A B 187 65.715 85.067 21.462 1.00 61.40 N
ATOM 21 C2 A B 187 64.726 84.345 20.924 1.00 62.61 C
ATOM 22 N3 A B 187 64.785 83.377 20.012 1.00 62.86 N
ATOM 23 C4 A B 187 66.055 83.159 19.636 1.00 63.59 C
ATOM 24 P C B 188 67.673 78.623 14.552 1.00 80.83 P
ATOM 25 OP1 C B 188 68.171 77.230 14.611 1.00 81.47 O
ATOM 26 OP2 C B 188 68.617 79.751 14.781 1.00 81.91 O
ATOM 27 O5' C B 188 66.869 78.840 13.198 1.00 80.55 O
TER
Atoms:
OP1: (68.278,89.796,28.340)
OP2: (70.743,89.907,27.627)
C3': (68.620,85.668,26.064)
C1': (69.942,86.090,24.191)
C5': (67.816,88.082,25.934)
O6: (74.511,87.185,20.487)
O4': (68.830,86.952,24.066)
C8: (71.970,87.616,23.911)
C2: (71.653,85.074,20.371)
C6: (73.449,86.680,20.853)
C5: (72.710,86.934,22.036)
C4: (71.548,86.227,22.259)
P: (69.302,89.824,27.271)
C4': (67.956,86.761,25.219)
C2': (70.087,85.830,25.689)
O2': (70.911,84.714,25.977)
N1: (72.831,85.716,20.063)
N2: (71.203,84.179,19.473)
N3: (70.964,85.294,21.477)
N7: (72.958,87.814,23.080)
N9: (71.096,86.643,23.486)
O5': (69.116,88.537,26.356)
O3': (68.181,84.390,25.609)
OP2: (70.743,89.907,27.627)
C3': (68.620,85.668,26.064)
C1': (69.942,86.090,24.191)
C5': (67.816,88.082,25.934)
O6: (74.511,87.185,20.487)
O4': (68.830,86.952,24.066)
C8: (71.970,87.616,23.911)
C2: (71.653,85.074,20.371)
C6: (73.449,86.680,20.853)
C5: (72.710,86.934,22.036)
C4: (71.548,86.227,22.259)
P: (69.302,89.824,27.271)
C4': (67.956,86.761,25.219)
C2': (70.087,85.830,25.689)
O2': (70.911,84.714,25.977)
N1: (72.831,85.716,20.063)
N2: (71.203,84.179,19.473)
N3: (70.964,85.294,21.477)
N7: (72.958,87.814,23.080)
N9: (71.096,86.643,23.486)
O5': (69.116,88.537,26.356)
O3': (68.181,84.390,25.609)
OP1: (64.930,76.895,22.133)
OP2: (66.852,75.652,20.985)
C3': (66.671,79.520,16.793)
C1': (65.645,81.292,17.999)
C5': (66.474,77.885,18.779)
O4': (65.528,80.106,18.764)
C8: (67.869,82.393,18.672)
O2': (64.913,80.861,15.766)
C6: (66.979,84.826,21.061)
C5: (67.179,83.817,20.094)
C4: (66.055,83.159,19.636)
P: (66.089,76.901,21.207)
C4': (65.829,78.959,17.931)
C2': (66.066,80.904,16.577)
C2: (64.726,84.345,20.924)
N1: (65.715,85.067,21.462)
N3: (64.785,83.377,20.012)
N6: (67.964,85.553,21.597)
N7: (68.322,83.324,19.476)
N9: (66.503,82.235,18.723)
O5': (65.564,77.464,19.813)
O3': (66.510,78.710,15.622)
OP2: (66.852,75.652,20.985)
C3': (66.671,79.520,16.793)
C1': (65.645,81.292,17.999)
C5': (66.474,77.885,18.779)
O4': (65.528,80.106,18.764)
C8: (67.869,82.393,18.672)
O2': (64.913,80.861,15.766)
C6: (66.979,84.826,21.061)
C5: (67.179,83.817,20.094)
C4: (66.055,83.159,19.636)
P: (66.089,76.901,21.207)
C4': (65.829,78.959,17.931)
C2': (66.066,80.904,16.577)
C2: (64.726,84.345,20.924)
N1: (65.715,85.067,21.462)
N3: (64.785,83.377,20.012)
N6: (67.964,85.553,21.597)
N7: (68.322,83.324,19.476)
N9: (66.503,82.235,18.723)
O5': (65.564,77.464,19.813)
O3': (66.510,78.710,15.622)
Image (generated by PyMOL):