Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A468:A459
Extra
PDB:
ATOM 1 O3' G A 467 -51.974 -64.283 34.915 1.00 0.01 O
ATOM 2 P G A 468 -51.955 -65.728 35.591 1.00 0.01 P
ATOM 3 OP1 G A 468 -53.136 -66.453 35.120 1.00 0.01 O
ATOM 4 OP2 G A 468 -51.773 -65.538 37.038 1.00 0.01 O
ATOM 5 O5' G A 468 -50.672 -66.365 34.959 1.00 0.01 O
ATOM 6 C5' G A 468 -50.722 -66.892 33.673 1.00 0.01 C
ATOM 7 C4' G A 468 -49.477 -67.634 33.358 1.00 0.01 C
ATOM 8 O4' G A 468 -48.372 -66.717 33.281 1.00 0.01 O
ATOM 9 C3' G A 468 -49.034 -68.627 34.387 1.00 0.01 C
ATOM 10 O3' G A 468 -49.767 -69.826 34.339 1.00 0.01 O
ATOM 11 C2' G A 468 -47.580 -68.773 34.033 1.00 0.01 C
ATOM 12 O2' G A 468 -47.444 -69.461 32.817 1.00 0.01 O
ATOM 13 C1' G A 468 -47.223 -67.322 33.792 1.00 0.01 C
ATOM 14 N9 G A 468 -46.891 -66.660 35.051 1.00 0.01 N
ATOM 15 C8 G A 468 -47.742 -66.027 35.905 1.00 0.01 C
ATOM 16 N7 G A 468 -47.164 -65.603 36.969 1.00 0.01 N
ATOM 17 C5 G A 468 -45.861 -65.998 36.814 1.00 0.01 C
ATOM 18 C6 G A 468 -44.758 -65.825 37.659 1.00 0.01 C
ATOM 19 O6 G A 468 -44.743 -65.276 38.747 1.00 0.01 O
ATOM 20 N1 G A 468 -43.615 -66.375 37.121 1.00 0.01 N
ATOM 21 C2 G A 468 -43.559 -67.028 35.922 1.00 0.01 C
ATOM 22 N2 G A 468 -42.380 -67.518 35.546 1.00 0.01 N
ATOM 23 N3 G A 468 -44.580 -67.218 35.126 1.00 0.01 N
ATOM 24 C4 G A 468 -45.679 -66.663 35.639 1.00 0.01 C
ATOM 25 P A A 469 -49.550 -70.939 35.457 1.00 0.01 P
ATOM 26 OP1 A A 469 -50.424 -72.060 35.120 1.00 0.01 O
ATOM 27 OP2 A A 469 -49.694 -70.302 36.773 1.00 0.01 O
ATOM 28 O5' A A 469 -48.067 -71.345 35.214 1.00 0.01 O
TER
ATOM 1 O3' U B 458 -36.376 -68.090 35.940 1.00 0.01 O
ATOM 2 P A B 459 -36.384 -66.929 34.843 1.00 0.01 P
ATOM 3 OP1 A B 459 -35.010 -66.440 34.741 1.00 0.01 O
ATOM 4 OP2 A B 459 -37.452 -65.962 35.206 1.00 0.01 O
ATOM 5 O5' A B 459 -36.758 -67.715 33.529 1.00 0.01 O
ATOM 6 C5' A B 459 -35.881 -68.703 33.028 1.00 0.01 C
ATOM 7 C4' A B 459 -36.479 -69.429 31.865 1.00 0.01 C
ATOM 8 O4' A B 459 -37.632 -70.151 32.303 1.00 0.01 O
ATOM 9 C3' A B 459 -37.007 -68.558 30.762 1.00 0.01 C
ATOM 10 O3' A B 459 -36.009 -68.133 29.901 1.00 0.01 O
ATOM 11 C2' A B 459 -38.027 -69.439 30.090 1.00 0.01 C
ATOM 12 O2' A B 459 -37.395 -70.325 29.186 1.00 0.01 O
ATOM 13 C1' A B 459 -38.564 -70.237 31.262 1.00 0.01 C
ATOM 14 N9 A B 459 -39.848 -69.738 31.754 1.00 0.01 N
ATOM 15 C8 A B 459 -40.081 -69.017 32.880 1.00 0.01 C
ATOM 16 N7 A B 459 -41.342 -68.756 33.082 1.00 0.01 N
ATOM 17 C5 A B 459 -41.970 -69.372 32.022 1.00 0.01 C
ATOM 18 C6 A B 459 -43.308 -69.471 31.657 1.00 0.01 C
ATOM 19 N6 A B 459 -44.312 -68.931 32.328 1.00 0.01 N
ATOM 20 N1 A B 459 -43.588 -70.161 30.547 1.00 0.01 N
ATOM 21 C2 A B 459 -42.584 -70.709 29.859 1.00 0.01 C
ATOM 22 N3 A B 459 -41.286 -70.681 30.094 1.00 0.01 N
ATOM 23 C4 A B 459 -41.056 -69.987 31.205 1.00 0.01 C
ATOM 24 P C B 460 -35.995 -66.630 29.439 1.00 0.01 P
ATOM 25 OP1 C B 460 -34.953 -66.499 28.396 1.00 0.01 O
ATOM 26 OP2 C B 460 -35.899 -65.808 30.672 1.00 0.01 O
ATOM 27 O5' C B 460 -37.414 -66.468 28.775 1.00 0.01 O
TER
ATOM 2 P G A 468 -51.955 -65.728 35.591 1.00 0.01 P
ATOM 3 OP1 G A 468 -53.136 -66.453 35.120 1.00 0.01 O
ATOM 4 OP2 G A 468 -51.773 -65.538 37.038 1.00 0.01 O
ATOM 5 O5' G A 468 -50.672 -66.365 34.959 1.00 0.01 O
ATOM 6 C5' G A 468 -50.722 -66.892 33.673 1.00 0.01 C
ATOM 7 C4' G A 468 -49.477 -67.634 33.358 1.00 0.01 C
ATOM 8 O4' G A 468 -48.372 -66.717 33.281 1.00 0.01 O
ATOM 9 C3' G A 468 -49.034 -68.627 34.387 1.00 0.01 C
ATOM 10 O3' G A 468 -49.767 -69.826 34.339 1.00 0.01 O
ATOM 11 C2' G A 468 -47.580 -68.773 34.033 1.00 0.01 C
ATOM 12 O2' G A 468 -47.444 -69.461 32.817 1.00 0.01 O
ATOM 13 C1' G A 468 -47.223 -67.322 33.792 1.00 0.01 C
ATOM 14 N9 G A 468 -46.891 -66.660 35.051 1.00 0.01 N
ATOM 15 C8 G A 468 -47.742 -66.027 35.905 1.00 0.01 C
ATOM 16 N7 G A 468 -47.164 -65.603 36.969 1.00 0.01 N
ATOM 17 C5 G A 468 -45.861 -65.998 36.814 1.00 0.01 C
ATOM 18 C6 G A 468 -44.758 -65.825 37.659 1.00 0.01 C
ATOM 19 O6 G A 468 -44.743 -65.276 38.747 1.00 0.01 O
ATOM 20 N1 G A 468 -43.615 -66.375 37.121 1.00 0.01 N
ATOM 21 C2 G A 468 -43.559 -67.028 35.922 1.00 0.01 C
ATOM 22 N2 G A 468 -42.380 -67.518 35.546 1.00 0.01 N
ATOM 23 N3 G A 468 -44.580 -67.218 35.126 1.00 0.01 N
ATOM 24 C4 G A 468 -45.679 -66.663 35.639 1.00 0.01 C
ATOM 25 P A A 469 -49.550 -70.939 35.457 1.00 0.01 P
ATOM 26 OP1 A A 469 -50.424 -72.060 35.120 1.00 0.01 O
ATOM 27 OP2 A A 469 -49.694 -70.302 36.773 1.00 0.01 O
ATOM 28 O5' A A 469 -48.067 -71.345 35.214 1.00 0.01 O
TER
ATOM 1 O3' U B 458 -36.376 -68.090 35.940 1.00 0.01 O
ATOM 2 P A B 459 -36.384 -66.929 34.843 1.00 0.01 P
ATOM 3 OP1 A B 459 -35.010 -66.440 34.741 1.00 0.01 O
ATOM 4 OP2 A B 459 -37.452 -65.962 35.206 1.00 0.01 O
ATOM 5 O5' A B 459 -36.758 -67.715 33.529 1.00 0.01 O
ATOM 6 C5' A B 459 -35.881 -68.703 33.028 1.00 0.01 C
ATOM 7 C4' A B 459 -36.479 -69.429 31.865 1.00 0.01 C
ATOM 8 O4' A B 459 -37.632 -70.151 32.303 1.00 0.01 O
ATOM 9 C3' A B 459 -37.007 -68.558 30.762 1.00 0.01 C
ATOM 10 O3' A B 459 -36.009 -68.133 29.901 1.00 0.01 O
ATOM 11 C2' A B 459 -38.027 -69.439 30.090 1.00 0.01 C
ATOM 12 O2' A B 459 -37.395 -70.325 29.186 1.00 0.01 O
ATOM 13 C1' A B 459 -38.564 -70.237 31.262 1.00 0.01 C
ATOM 14 N9 A B 459 -39.848 -69.738 31.754 1.00 0.01 N
ATOM 15 C8 A B 459 -40.081 -69.017 32.880 1.00 0.01 C
ATOM 16 N7 A B 459 -41.342 -68.756 33.082 1.00 0.01 N
ATOM 17 C5 A B 459 -41.970 -69.372 32.022 1.00 0.01 C
ATOM 18 C6 A B 459 -43.308 -69.471 31.657 1.00 0.01 C
ATOM 19 N6 A B 459 -44.312 -68.931 32.328 1.00 0.01 N
ATOM 20 N1 A B 459 -43.588 -70.161 30.547 1.00 0.01 N
ATOM 21 C2 A B 459 -42.584 -70.709 29.859 1.00 0.01 C
ATOM 22 N3 A B 459 -41.286 -70.681 30.094 1.00 0.01 N
ATOM 23 C4 A B 459 -41.056 -69.987 31.205 1.00 0.01 C
ATOM 24 P C B 460 -35.995 -66.630 29.439 1.00 0.01 P
ATOM 25 OP1 C B 460 -34.953 -66.499 28.396 1.00 0.01 O
ATOM 26 OP2 C B 460 -35.899 -65.808 30.672 1.00 0.01 O
ATOM 27 O5' C B 460 -37.414 -66.468 28.775 1.00 0.01 O
TER
Atoms:
OP1: (-53.136,-66.453,35.120)
OP2: (-51.773,-65.538,37.038)
C3': (-49.034,-68.627,34.387)
C1': (-47.223,-67.322,33.792)
C5': (-50.722,-66.892,33.673)
O6: (-44.743,-65.276,38.747)
O4': (-48.372,-66.717,33.281)
C8: (-47.742,-66.027,35.905)
C2: (-43.559,-67.028,35.922)
C6: (-44.758,-65.825,37.659)
C5: (-45.861,-65.998,36.814)
C4: (-45.679,-66.663,35.639)
P: (-51.955,-65.728,35.591)
C4': (-49.477,-67.634,33.358)
C2': (-47.580,-68.773,34.033)
O2': (-47.444,-69.461,32.817)
N1: (-43.615,-66.375,37.121)
N2: (-42.380,-67.518,35.546)
N3: (-44.580,-67.218,35.126)
N7: (-47.164,-65.603,36.969)
N9: (-46.891,-66.660,35.051)
O5': (-50.672,-66.365,34.959)
O3': (-49.767,-69.826,34.339)
OP2: (-51.773,-65.538,37.038)
C3': (-49.034,-68.627,34.387)
C1': (-47.223,-67.322,33.792)
C5': (-50.722,-66.892,33.673)
O6: (-44.743,-65.276,38.747)
O4': (-48.372,-66.717,33.281)
C8: (-47.742,-66.027,35.905)
C2: (-43.559,-67.028,35.922)
C6: (-44.758,-65.825,37.659)
C5: (-45.861,-65.998,36.814)
C4: (-45.679,-66.663,35.639)
P: (-51.955,-65.728,35.591)
C4': (-49.477,-67.634,33.358)
C2': (-47.580,-68.773,34.033)
O2': (-47.444,-69.461,32.817)
N1: (-43.615,-66.375,37.121)
N2: (-42.380,-67.518,35.546)
N3: (-44.580,-67.218,35.126)
N7: (-47.164,-65.603,36.969)
N9: (-46.891,-66.660,35.051)
O5': (-50.672,-66.365,34.959)
O3': (-49.767,-69.826,34.339)
OP1: (-35.010,-66.440,34.741)
OP2: (-37.452,-65.962,35.206)
C3': (-37.007,-68.558,30.762)
C1': (-38.564,-70.237,31.262)
C5': (-35.881,-68.703,33.028)
O4': (-37.632,-70.151,32.303)
C8: (-40.081,-69.017,32.880)
O2': (-37.395,-70.325,29.186)
C6: (-43.308,-69.471,31.657)
C5: (-41.970,-69.372,32.022)
C4: (-41.056,-69.987,31.205)
P: (-36.384,-66.929,34.843)
C4': (-36.479,-69.429,31.865)
C2': (-38.027,-69.439,30.090)
C2: (-42.584,-70.709,29.859)
N1: (-43.588,-70.161,30.547)
N3: (-41.286,-70.681,30.094)
N6: (-44.312,-68.931,32.328)
N7: (-41.342,-68.756,33.082)
N9: (-39.848,-69.738,31.754)
O5': (-36.758,-67.715,33.529)
O3': (-36.009,-68.133,29.901)
OP2: (-37.452,-65.962,35.206)
C3': (-37.007,-68.558,30.762)
C1': (-38.564,-70.237,31.262)
C5': (-35.881,-68.703,33.028)
O4': (-37.632,-70.151,32.303)
C8: (-40.081,-69.017,32.880)
O2': (-37.395,-70.325,29.186)
C6: (-43.308,-69.471,31.657)
C5: (-41.970,-69.372,32.022)
C4: (-41.056,-69.987,31.205)
P: (-36.384,-66.929,34.843)
C4': (-36.479,-69.429,31.865)
C2': (-38.027,-69.439,30.090)
C2: (-42.584,-70.709,29.859)
N1: (-43.588,-70.161,30.547)
N3: (-41.286,-70.681,30.094)
N6: (-44.312,-68.931,32.328)
N7: (-41.342,-68.756,33.082)
N9: (-39.848,-69.738,31.754)
O5': (-36.758,-67.715,33.529)
O3': (-36.009,-68.133,29.901)
Image (generated by PyMOL):