Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A2513:A2652
Extra
PDB:
ATOM 1 O3' U A2512 28.748 145.605 139.777 1.00 46.57 O
ATOM 2 P G A2513 29.934 144.550 140.080 1.00 47.36 P
ATOM 3 OP1 G A2513 29.385 143.670 141.144 1.00 47.23 O
ATOM 4 OP2 G A2513 31.251 145.208 140.283 1.00 44.14 O
ATOM 5 O5' G A2513 30.026 143.699 138.744 1.00 47.06 O
ATOM 6 C5' G A2513 28.899 142.939 138.280 1.00 49.52 C
ATOM 7 C4' G A2513 29.280 142.130 137.059 1.00 51.40 C
ATOM 8 O4' G A2513 29.491 143.012 135.920 1.00 51.10 O
ATOM 9 C3' G A2513 30.564 141.331 137.213 1.00 50.19 C
ATOM 10 O3' G A2513 30.473 140.122 136.476 1.00 50.58 O
ATOM 11 C2' G A2513 31.596 142.272 136.614 1.00 49.55 C
ATOM 12 O2' G A2513 32.797 141.651 136.214 1.00 47.52 O
ATOM 13 C1' G A2513 30.806 142.863 135.446 1.00 50.52 C
ATOM 14 N9 G A2513 31.278 144.169 134.998 1.00 50.94 N
ATOM 15 C8 G A2513 31.892 145.135 135.756 1.00 49.44 C
ATOM 16 N7 G A2513 32.280 146.165 135.058 1.00 49.40 N
ATOM 17 C5 G A2513 31.879 145.873 133.762 1.00 50.65 C
ATOM 18 C6 G A2513 32.055 146.602 132.558 1.00 51.10 C
ATOM 19 O6 G A2513 32.633 147.686 132.388 1.00 51.15 O
ATOM 20 N1 G A2513 31.495 145.937 131.469 1.00 51.95 N
ATOM 21 C2 G A2513 30.864 144.722 131.522 1.00 51.95 C
ATOM 22 N2 G A2513 30.423 144.233 130.351 1.00 51.18 N
ATOM 23 N3 G A2513 30.691 144.031 132.640 1.00 52.05 N
ATOM 24 C4 G A2513 31.231 144.659 133.712 1.00 51.31 C
ATOM 25 P A A2514 31.229 138.819 137.012 1.00 50.67 P
ATOM 26 OP1 A A2514 30.541 138.368 138.247 1.00 50.09 O
ATOM 27 OP2 A A2514 32.668 139.162 137.051 1.00 48.87 O
ATOM 28 O5' A A2514 30.953 137.730 135.892 1.00 49.10 O
TER
ATOM 1 O3' A B2651 29.557 141.996 123.091 1.00 44.40 O
ATOM 2 P A B2652 30.245 141.664 124.493 1.00 46.02 P
ATOM 3 OP1 A B2652 30.327 142.900 125.305 1.00 46.23 O
ATOM 4 OP2 A B2652 31.470 140.888 124.197 1.00 45.84 O
ATOM 5 O5' A B2652 29.202 140.708 125.204 1.00 44.03 O
ATOM 6 C5' A B2652 29.152 139.332 124.877 1.00 42.41 C
ATOM 7 C4' A B2652 28.117 138.670 125.710 1.00 42.41 C
ATOM 8 O4' A B2652 28.438 138.917 127.099 1.00 42.01 O
ATOM 9 C3' A B2652 26.706 139.200 125.515 1.00 42.88 C
ATOM 10 O3' A B2652 25.864 138.096 125.731 1.00 45.08 O
ATOM 11 C2' A B2652 26.557 140.182 126.666 1.00 42.72 C
ATOM 12 O2' A B2652 25.216 140.425 127.046 1.00 42.65 O
ATOM 13 C1' A B2652 27.304 139.422 127.751 1.00 41.48 C
ATOM 14 N9 A B2652 27.758 140.208 128.883 1.00 40.40 N
ATOM 15 C8 A B2652 28.662 141.236 128.883 1.00 40.28 C
ATOM 16 N7 A B2652 28.894 141.732 130.071 1.00 39.19 N
ATOM 17 C5 A B2652 28.085 140.981 130.907 1.00 38.41 C
ATOM 18 C6 A B2652 27.881 141.020 132.280 1.00 38.69 C
ATOM 19 N6 A B2652 28.500 141.892 133.081 1.00 39.75 N
ATOM 20 N1 A B2652 27.011 140.135 132.815 1.00 38.88 N
ATOM 21 C2 A B2652 26.387 139.280 131.998 1.00 39.48 C
ATOM 22 N3 A B2652 26.491 139.150 130.678 1.00 38.97 N
ATOM 23 C4 A B2652 27.372 140.043 130.189 1.00 39.92 C
ATOM 24 P A B2653 25.440 137.191 124.495 1.00 48.49 P
ATOM 25 OP1 A B2653 24.849 135.959 125.058 1.00 49.77 O
ATOM 26 OP2 A B2653 26.558 137.090 123.526 1.00 47.91 O
ATOM 27 O5' A B2653 24.264 138.037 123.844 1.00 49.55 O
TER
ATOM 2 P G A2513 29.934 144.550 140.080 1.00 47.36 P
ATOM 3 OP1 G A2513 29.385 143.670 141.144 1.00 47.23 O
ATOM 4 OP2 G A2513 31.251 145.208 140.283 1.00 44.14 O
ATOM 5 O5' G A2513 30.026 143.699 138.744 1.00 47.06 O
ATOM 6 C5' G A2513 28.899 142.939 138.280 1.00 49.52 C
ATOM 7 C4' G A2513 29.280 142.130 137.059 1.00 51.40 C
ATOM 8 O4' G A2513 29.491 143.012 135.920 1.00 51.10 O
ATOM 9 C3' G A2513 30.564 141.331 137.213 1.00 50.19 C
ATOM 10 O3' G A2513 30.473 140.122 136.476 1.00 50.58 O
ATOM 11 C2' G A2513 31.596 142.272 136.614 1.00 49.55 C
ATOM 12 O2' G A2513 32.797 141.651 136.214 1.00 47.52 O
ATOM 13 C1' G A2513 30.806 142.863 135.446 1.00 50.52 C
ATOM 14 N9 G A2513 31.278 144.169 134.998 1.00 50.94 N
ATOM 15 C8 G A2513 31.892 145.135 135.756 1.00 49.44 C
ATOM 16 N7 G A2513 32.280 146.165 135.058 1.00 49.40 N
ATOM 17 C5 G A2513 31.879 145.873 133.762 1.00 50.65 C
ATOM 18 C6 G A2513 32.055 146.602 132.558 1.00 51.10 C
ATOM 19 O6 G A2513 32.633 147.686 132.388 1.00 51.15 O
ATOM 20 N1 G A2513 31.495 145.937 131.469 1.00 51.95 N
ATOM 21 C2 G A2513 30.864 144.722 131.522 1.00 51.95 C
ATOM 22 N2 G A2513 30.423 144.233 130.351 1.00 51.18 N
ATOM 23 N3 G A2513 30.691 144.031 132.640 1.00 52.05 N
ATOM 24 C4 G A2513 31.231 144.659 133.712 1.00 51.31 C
ATOM 25 P A A2514 31.229 138.819 137.012 1.00 50.67 P
ATOM 26 OP1 A A2514 30.541 138.368 138.247 1.00 50.09 O
ATOM 27 OP2 A A2514 32.668 139.162 137.051 1.00 48.87 O
ATOM 28 O5' A A2514 30.953 137.730 135.892 1.00 49.10 O
TER
ATOM 1 O3' A B2651 29.557 141.996 123.091 1.00 44.40 O
ATOM 2 P A B2652 30.245 141.664 124.493 1.00 46.02 P
ATOM 3 OP1 A B2652 30.327 142.900 125.305 1.00 46.23 O
ATOM 4 OP2 A B2652 31.470 140.888 124.197 1.00 45.84 O
ATOM 5 O5' A B2652 29.202 140.708 125.204 1.00 44.03 O
ATOM 6 C5' A B2652 29.152 139.332 124.877 1.00 42.41 C
ATOM 7 C4' A B2652 28.117 138.670 125.710 1.00 42.41 C
ATOM 8 O4' A B2652 28.438 138.917 127.099 1.00 42.01 O
ATOM 9 C3' A B2652 26.706 139.200 125.515 1.00 42.88 C
ATOM 10 O3' A B2652 25.864 138.096 125.731 1.00 45.08 O
ATOM 11 C2' A B2652 26.557 140.182 126.666 1.00 42.72 C
ATOM 12 O2' A B2652 25.216 140.425 127.046 1.00 42.65 O
ATOM 13 C1' A B2652 27.304 139.422 127.751 1.00 41.48 C
ATOM 14 N9 A B2652 27.758 140.208 128.883 1.00 40.40 N
ATOM 15 C8 A B2652 28.662 141.236 128.883 1.00 40.28 C
ATOM 16 N7 A B2652 28.894 141.732 130.071 1.00 39.19 N
ATOM 17 C5 A B2652 28.085 140.981 130.907 1.00 38.41 C
ATOM 18 C6 A B2652 27.881 141.020 132.280 1.00 38.69 C
ATOM 19 N6 A B2652 28.500 141.892 133.081 1.00 39.75 N
ATOM 20 N1 A B2652 27.011 140.135 132.815 1.00 38.88 N
ATOM 21 C2 A B2652 26.387 139.280 131.998 1.00 39.48 C
ATOM 22 N3 A B2652 26.491 139.150 130.678 1.00 38.97 N
ATOM 23 C4 A B2652 27.372 140.043 130.189 1.00 39.92 C
ATOM 24 P A B2653 25.440 137.191 124.495 1.00 48.49 P
ATOM 25 OP1 A B2653 24.849 135.959 125.058 1.00 49.77 O
ATOM 26 OP2 A B2653 26.558 137.090 123.526 1.00 47.91 O
ATOM 27 O5' A B2653 24.264 138.037 123.844 1.00 49.55 O
TER
Atoms:
OP1: (29.385,143.670,141.144)
OP2: (31.251,145.208,140.283)
C3': (30.564,141.331,137.213)
C1': (30.806,142.863,135.446)
C5': (28.899,142.939,138.280)
O6: (32.633,147.686,132.388)
O4': (29.491,143.012,135.920)
C8: (31.892,145.135,135.756)
C2: (30.864,144.722,131.522)
C6: (32.055,146.602,132.558)
C5: (31.879,145.873,133.762)
C4: (31.231,144.659,133.712)
P: (29.934,144.550,140.080)
C4': (29.280,142.130,137.059)
C2': (31.596,142.272,136.614)
O2': (32.797,141.651,136.214)
N1: (31.495,145.937,131.469)
N2: (30.423,144.233,130.351)
N3: (30.691,144.031,132.640)
N7: (32.280,146.165,135.058)
N9: (31.278,144.169,134.998)
O5': (30.026,143.699,138.744)
O3': (30.473,140.122,136.476)
OP2: (31.251,145.208,140.283)
C3': (30.564,141.331,137.213)
C1': (30.806,142.863,135.446)
C5': (28.899,142.939,138.280)
O6: (32.633,147.686,132.388)
O4': (29.491,143.012,135.920)
C8: (31.892,145.135,135.756)
C2: (30.864,144.722,131.522)
C6: (32.055,146.602,132.558)
C5: (31.879,145.873,133.762)
C4: (31.231,144.659,133.712)
P: (29.934,144.550,140.080)
C4': (29.280,142.130,137.059)
C2': (31.596,142.272,136.614)
O2': (32.797,141.651,136.214)
N1: (31.495,145.937,131.469)
N2: (30.423,144.233,130.351)
N3: (30.691,144.031,132.640)
N7: (32.280,146.165,135.058)
N9: (31.278,144.169,134.998)
O5': (30.026,143.699,138.744)
O3': (30.473,140.122,136.476)
OP1: (30.327,142.900,125.305)
OP2: (31.470,140.888,124.197)
C3': (26.706,139.200,125.515)
C1': (27.304,139.422,127.751)
C5': (29.152,139.332,124.877)
O4': (28.438,138.917,127.099)
C8: (28.662,141.236,128.883)
O2': (25.216,140.425,127.046)
C6: (27.881,141.020,132.280)
C5: (28.085,140.981,130.907)
C4: (27.372,140.043,130.189)
P: (30.245,141.664,124.493)
C4': (28.117,138.670,125.710)
C2': (26.557,140.182,126.666)
C2: (26.387,139.280,131.998)
N1: (27.011,140.135,132.815)
N3: (26.491,139.150,130.678)
N6: (28.500,141.892,133.081)
N7: (28.894,141.732,130.071)
N9: (27.758,140.208,128.883)
O5': (29.202,140.708,125.204)
O3': (25.864,138.096,125.731)
OP2: (31.470,140.888,124.197)
C3': (26.706,139.200,125.515)
C1': (27.304,139.422,127.751)
C5': (29.152,139.332,124.877)
O4': (28.438,138.917,127.099)
C8: (28.662,141.236,128.883)
O2': (25.216,140.425,127.046)
C6: (27.881,141.020,132.280)
C5: (28.085,140.981,130.907)
C4: (27.372,140.043,130.189)
P: (30.245,141.664,124.493)
C4': (28.117,138.670,125.710)
C2': (26.557,140.182,126.666)
C2: (26.387,139.280,131.998)
N1: (27.011,140.135,132.815)
N3: (26.491,139.150,130.678)
N6: (28.500,141.892,133.081)
N7: (28.894,141.732,130.071)
N9: (27.758,140.208,128.883)
O5': (29.202,140.708,125.204)
O3': (25.864,138.096,125.731)
Image (generated by PyMOL):