Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:01275:01300
Extra
PDB:
ATOM 1 O3' G A1274 3.988 136.701 57.059 1.00 50.79 O
ATOM 2 P G A1275 4.960 136.760 58.330 1.00 47.62 P
ATOM 3 OP1 G A1275 4.809 135.459 59.026 1.00 46.33 O
ATOM 4 OP2 G A1275 4.708 138.025 59.064 1.00 45.47 O
ATOM 5 O5' G A1275 6.417 136.830 57.705 1.00 47.93 O
ATOM 6 C5' G A1275 6.978 135.713 56.995 1.00 47.63 C
ATOM 7 C4' G A1275 8.483 135.797 57.034 1.00 46.87 C
ATOM 8 O4' G A1275 8.897 137.056 56.431 1.00 46.66 O
ATOM 9 C3' G A1275 9.080 135.805 58.439 1.00 45.69 C
ATOM 10 O3' G A1275 10.394 135.275 58.356 1.00 45.82 O
ATOM 11 C2' G A1275 9.155 137.290 58.755 1.00 44.54 C
ATOM 12 O2' G A1275 10.101 137.583 59.759 1.00 41.56 O
ATOM 13 C1' G A1275 9.573 137.839 57.392 1.00 45.15 C
ATOM 14 N9 G A1275 9.266 139.245 57.153 1.00 44.67 N
ATOM 15 C8 G A1275 8.108 139.923 57.458 1.00 44.36 C
ATOM 16 N7 G A1275 8.167 141.193 57.162 1.00 44.04 N
ATOM 17 C5 G A1275 9.434 141.359 56.616 1.00 44.84 C
ATOM 18 C6 G A1275 10.078 142.517 56.123 1.00 44.71 C
ATOM 19 O6 G A1275 9.655 143.673 56.083 1.00 46.94 O
ATOM 20 N1 G A1275 11.352 142.232 55.653 1.00 43.44 N
ATOM 21 C2 G A1275 11.939 140.997 55.670 1.00 42.38 C
ATOM 22 N2 G A1275 13.175 140.928 55.178 1.00 43.28 N
ATOM 23 N3 G A1275 11.360 139.912 56.135 1.00 41.90 N
ATOM 24 C4 G A1275 10.116 140.163 56.590 1.00 44.22 C
ATOM 25 P A A1276 10.982 134.396 59.556 1.00 44.12 P
ATOM 26 OP1 A A1276 9.933 133.451 60.020 1.00 43.51 O
ATOM 27 OP2 A A1276 11.590 135.344 60.519 1.00 41.93 O
ATOM 28 O5' A A1276 12.106 133.532 58.829 1.00 41.79 O
TER
ATOM 1 O3' G B1299 17.935 141.452 54.876 1.00 46.75 O
ATOM 2 P A B1300 18.782 141.816 53.566 1.00 47.51 P
ATOM 3 OP1 A B1300 20.024 142.536 53.962 1.00 46.66 O
ATOM 4 OP2 A B1300 17.862 142.430 52.580 1.00 47.72 O
ATOM 5 O5' A B1300 19.196 140.387 53.020 1.00 45.89 O
ATOM 6 C5' A B1300 20.143 139.588 53.738 1.00 46.39 C
ATOM 7 C4' A B1300 19.845 138.128 53.540 1.00 45.95 C
ATOM 8 O4' A B1300 18.657 137.764 54.294 1.00 46.23 O
ATOM 9 C3' A B1300 19.580 137.703 52.103 1.00 44.52 C
ATOM 10 O3' A B1300 20.008 136.367 51.946 1.00 44.41 O
ATOM 11 C2' A B1300 18.061 137.719 52.036 1.00 45.78 C
ATOM 12 O2' A B1300 17.572 136.869 51.020 1.00 47.49 O
ATOM 13 C1' A B1300 17.712 137.183 53.424 1.00 45.46 C
ATOM 14 N9 A B1300 16.376 137.507 53.922 1.00 45.30 N
ATOM 15 C8 A B1300 15.935 138.681 54.481 1.00 45.50 C
ATOM 16 N7 A B1300 14.685 138.642 54.871 1.00 45.18 N
ATOM 17 C5 A B1300 14.272 137.360 54.540 1.00 44.79 C
ATOM 18 C6 A B1300 13.049 136.689 54.702 1.00 44.91 C
ATOM 19 N6 A B1300 11.974 137.230 55.282 1.00 45.49 N
ATOM 20 N1 A B1300 12.968 135.421 54.251 1.00 44.76 N
ATOM 21 C2 A B1300 14.047 134.868 53.690 1.00 44.96 C
ATOM 22 N3 A B1300 15.252 135.390 53.491 1.00 45.48 N
ATOM 23 C4 A B1300 15.299 136.655 53.943 1.00 45.18 C
ATOM 24 P C B1301 21.076 136.000 50.820 1.00 44.19 P
ATOM 25 OP1 C B1301 22.386 136.021 51.483 1.00 47.30 O
ATOM 26 OP2 C B1301 20.855 136.836 49.627 1.00 47.20 O
ATOM 27 O5' C B1301 20.702 134.502 50.447 1.00 44.89 O
TER
ATOM 2 P G A1275 4.960 136.760 58.330 1.00 47.62 P
ATOM 3 OP1 G A1275 4.809 135.459 59.026 1.00 46.33 O
ATOM 4 OP2 G A1275 4.708 138.025 59.064 1.00 45.47 O
ATOM 5 O5' G A1275 6.417 136.830 57.705 1.00 47.93 O
ATOM 6 C5' G A1275 6.978 135.713 56.995 1.00 47.63 C
ATOM 7 C4' G A1275 8.483 135.797 57.034 1.00 46.87 C
ATOM 8 O4' G A1275 8.897 137.056 56.431 1.00 46.66 O
ATOM 9 C3' G A1275 9.080 135.805 58.439 1.00 45.69 C
ATOM 10 O3' G A1275 10.394 135.275 58.356 1.00 45.82 O
ATOM 11 C2' G A1275 9.155 137.290 58.755 1.00 44.54 C
ATOM 12 O2' G A1275 10.101 137.583 59.759 1.00 41.56 O
ATOM 13 C1' G A1275 9.573 137.839 57.392 1.00 45.15 C
ATOM 14 N9 G A1275 9.266 139.245 57.153 1.00 44.67 N
ATOM 15 C8 G A1275 8.108 139.923 57.458 1.00 44.36 C
ATOM 16 N7 G A1275 8.167 141.193 57.162 1.00 44.04 N
ATOM 17 C5 G A1275 9.434 141.359 56.616 1.00 44.84 C
ATOM 18 C6 G A1275 10.078 142.517 56.123 1.00 44.71 C
ATOM 19 O6 G A1275 9.655 143.673 56.083 1.00 46.94 O
ATOM 20 N1 G A1275 11.352 142.232 55.653 1.00 43.44 N
ATOM 21 C2 G A1275 11.939 140.997 55.670 1.00 42.38 C
ATOM 22 N2 G A1275 13.175 140.928 55.178 1.00 43.28 N
ATOM 23 N3 G A1275 11.360 139.912 56.135 1.00 41.90 N
ATOM 24 C4 G A1275 10.116 140.163 56.590 1.00 44.22 C
ATOM 25 P A A1276 10.982 134.396 59.556 1.00 44.12 P
ATOM 26 OP1 A A1276 9.933 133.451 60.020 1.00 43.51 O
ATOM 27 OP2 A A1276 11.590 135.344 60.519 1.00 41.93 O
ATOM 28 O5' A A1276 12.106 133.532 58.829 1.00 41.79 O
TER
ATOM 1 O3' G B1299 17.935 141.452 54.876 1.00 46.75 O
ATOM 2 P A B1300 18.782 141.816 53.566 1.00 47.51 P
ATOM 3 OP1 A B1300 20.024 142.536 53.962 1.00 46.66 O
ATOM 4 OP2 A B1300 17.862 142.430 52.580 1.00 47.72 O
ATOM 5 O5' A B1300 19.196 140.387 53.020 1.00 45.89 O
ATOM 6 C5' A B1300 20.143 139.588 53.738 1.00 46.39 C
ATOM 7 C4' A B1300 19.845 138.128 53.540 1.00 45.95 C
ATOM 8 O4' A B1300 18.657 137.764 54.294 1.00 46.23 O
ATOM 9 C3' A B1300 19.580 137.703 52.103 1.00 44.52 C
ATOM 10 O3' A B1300 20.008 136.367 51.946 1.00 44.41 O
ATOM 11 C2' A B1300 18.061 137.719 52.036 1.00 45.78 C
ATOM 12 O2' A B1300 17.572 136.869 51.020 1.00 47.49 O
ATOM 13 C1' A B1300 17.712 137.183 53.424 1.00 45.46 C
ATOM 14 N9 A B1300 16.376 137.507 53.922 1.00 45.30 N
ATOM 15 C8 A B1300 15.935 138.681 54.481 1.00 45.50 C
ATOM 16 N7 A B1300 14.685 138.642 54.871 1.00 45.18 N
ATOM 17 C5 A B1300 14.272 137.360 54.540 1.00 44.79 C
ATOM 18 C6 A B1300 13.049 136.689 54.702 1.00 44.91 C
ATOM 19 N6 A B1300 11.974 137.230 55.282 1.00 45.49 N
ATOM 20 N1 A B1300 12.968 135.421 54.251 1.00 44.76 N
ATOM 21 C2 A B1300 14.047 134.868 53.690 1.00 44.96 C
ATOM 22 N3 A B1300 15.252 135.390 53.491 1.00 45.48 N
ATOM 23 C4 A B1300 15.299 136.655 53.943 1.00 45.18 C
ATOM 24 P C B1301 21.076 136.000 50.820 1.00 44.19 P
ATOM 25 OP1 C B1301 22.386 136.021 51.483 1.00 47.30 O
ATOM 26 OP2 C B1301 20.855 136.836 49.627 1.00 47.20 O
ATOM 27 O5' C B1301 20.702 134.502 50.447 1.00 44.89 O
TER
Atoms:
OP1: (4.809,135.459,59.026)
OP2: (4.708,138.025,59.064)
C3': (9.080,135.805,58.439)
C1': (9.573,137.839,57.392)
C5': (6.978,135.713,56.995)
O6: (9.655,143.673,56.083)
O4': (8.897,137.056,56.431)
C8: (8.108,139.923,57.458)
C2: (11.939,140.997,55.670)
C6: (10.078,142.517,56.123)
C5: (9.434,141.359,56.616)
C4: (10.116,140.163,56.590)
P: (4.960,136.760,58.330)
C4': (8.483,135.797,57.034)
C2': (9.155,137.290,58.755)
O2': (10.101,137.583,59.759)
N1: (11.352,142.232,55.653)
N2: (13.175,140.928,55.178)
N3: (11.360,139.912,56.135)
N7: (8.167,141.193,57.162)
N9: (9.266,139.245,57.153)
O5': (6.417,136.830,57.705)
O3': (10.394,135.275,58.356)
OP2: (4.708,138.025,59.064)
C3': (9.080,135.805,58.439)
C1': (9.573,137.839,57.392)
C5': (6.978,135.713,56.995)
O6: (9.655,143.673,56.083)
O4': (8.897,137.056,56.431)
C8: (8.108,139.923,57.458)
C2: (11.939,140.997,55.670)
C6: (10.078,142.517,56.123)
C5: (9.434,141.359,56.616)
C4: (10.116,140.163,56.590)
P: (4.960,136.760,58.330)
C4': (8.483,135.797,57.034)
C2': (9.155,137.290,58.755)
O2': (10.101,137.583,59.759)
N1: (11.352,142.232,55.653)
N2: (13.175,140.928,55.178)
N3: (11.360,139.912,56.135)
N7: (8.167,141.193,57.162)
N9: (9.266,139.245,57.153)
O5': (6.417,136.830,57.705)
O3': (10.394,135.275,58.356)
OP1: (20.024,142.536,53.962)
OP2: (17.862,142.430,52.580)
C3': (19.580,137.703,52.103)
C1': (17.712,137.183,53.424)
C5': (20.143,139.588,53.738)
O4': (18.657,137.764,54.294)
C8: (15.935,138.681,54.481)
O2': (17.572,136.869,51.020)
C6: (13.049,136.689,54.702)
C5: (14.272,137.360,54.540)
C4: (15.299,136.655,53.943)
P: (18.782,141.816,53.566)
C4': (19.845,138.128,53.540)
C2': (18.061,137.719,52.036)
C2: (14.047,134.868,53.690)
N1: (12.968,135.421,54.251)
N3: (15.252,135.390,53.491)
N6: (11.974,137.230,55.282)
N7: (14.685,138.642,54.871)
N9: (16.376,137.507,53.922)
O5': (19.196,140.387,53.020)
O3': (20.008,136.367,51.946)
OP2: (17.862,142.430,52.580)
C3': (19.580,137.703,52.103)
C1': (17.712,137.183,53.424)
C5': (20.143,139.588,53.738)
O4': (18.657,137.764,54.294)
C8: (15.935,138.681,54.481)
O2': (17.572,136.869,51.020)
C6: (13.049,136.689,54.702)
C5: (14.272,137.360,54.540)
C4: (15.299,136.655,53.943)
P: (18.782,141.816,53.566)
C4': (19.845,138.128,53.540)
C2': (18.061,137.719,52.036)
C2: (14.047,134.868,53.690)
N1: (12.968,135.421,54.251)
N3: (15.252,135.390,53.491)
N6: (11.974,137.230,55.282)
N7: (14.685,138.642,54.871)
N9: (16.376,137.507,53.922)
O5': (19.196,140.387,53.020)
O3': (20.008,136.367,51.946)
Image (generated by PyMOL):