ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQN:0394:0371

Extra

PDB:
ATOM 1 O3' C A 393 103.613 96.497 29.331 1.00 56.84 O
ATOM 2 P G A 394 103.851 96.787 27.758 1.00 58.48 P
ATOM 3 OP1 G A 394 104.919 95.842 27.339 1.00 59.19 O
ATOM 4 OP2 G A 394 104.036 98.245 27.527 1.00 59.08 O
ATOM 5 O5' G A 394 102.483 96.367 27.055 1.00 56.13 O
ATOM 6 C5' G A 394 102.122 94.984 26.891 1.00 54.21 C
ATOM 7 C4' G A 394 100.757 94.878 26.257 1.00 55.54 C
ATOM 8 O4' G A 394 99.769 95.459 27.147 1.00 56.14 O
ATOM 9 C3' G A 394 100.572 95.637 24.950 1.00 56.64 C
ATOM 10 O3' G A 394 101.059 94.875 23.849 1.00 57.11 O
ATOM 11 C2' G A 394 99.064 95.833 24.908 1.00 56.30 C
ATOM 12 O2' G A 394 98.394 94.661 24.503 1.00 57.17 O
ATOM 13 C1' G A 394 98.756 96.099 26.386 1.00 55.47 C
ATOM 14 N9 G A 394 98.759 97.520 26.727 1.00 53.02 N
ATOM 15 C8 G A 394 99.837 98.260 27.154 1.00 52.90 C
ATOM 16 N7 G A 394 99.544 99.512 27.376 1.00 51.62 N
ATOM 17 C5 G A 394 98.191 99.607 27.081 1.00 49.12 C
ATOM 18 C6 G A 394 97.324 100.722 27.133 1.00 47.47 C
ATOM 19 O6 G A 394 97.587 101.880 27.464 1.00 45.11 O
ATOM 20 N1 G A 394 96.030 100.384 26.748 1.00 47.51 N
ATOM 21 C2 G A 394 95.621 99.126 26.369 1.00 47.76 C
ATOM 22 N2 G A 394 94.318 98.991 26.051 1.00 44.23 N
ATOM 23 N3 G A 394 96.427 98.076 26.312 1.00 48.28 N
ATOM 24 C4 G A 394 97.689 98.386 26.680 1.00 50.46 C
ATOM 25 P A A 395 101.278 95.570 22.409 1.00 58.27 P
ATOM 26 OP1 A A 395 102.528 94.959 21.906 1.00 59.41 O
ATOM 27 OP2 A A 395 101.157 97.050 22.458 1.00 58.85 O
ATOM 28 O5' A A 395 100.076 94.974 21.550 1.00 58.64 O
TER

ATOM 1 O3' U B 370 88.795 100.981 24.559 1.00 48.06 O
ATOM 2 P A B 371 88.413 100.030 25.793 1.00 49.72 P
ATOM 3 OP1 A B 371 86.992 100.299 26.138 1.00 47.94 O
ATOM 4 OP2 A B 371 89.462 100.149 26.847 1.00 48.97 O
ATOM 5 O5' A B 371 88.505 98.571 25.168 1.00 50.81 O
ATOM 6 C5' A B 371 87.564 98.150 24.167 1.00 54.57 C
ATOM 7 C4' A B 371 87.912 96.771 23.672 1.00 55.93 C
ATOM 8 O4' A B 371 89.138 96.822 22.897 1.00 55.00 O
ATOM 9 C3' A B 371 88.206 95.735 24.745 1.00 55.12 C
ATOM 10 O3' A B 371 87.014 95.202 25.312 1.00 56.89 O
ATOM 11 C2' A B 371 88.992 94.696 23.958 1.00 54.85 C
ATOM 12 O2' A B 371 88.152 93.893 23.160 1.00 53.05 O
ATOM 13 C1' A B 371 89.829 95.587 23.034 1.00 55.13 C
ATOM 14 N9 A B 371 91.179 95.849 23.538 1.00 54.70 N
ATOM 15 C8 A B 371 91.671 96.990 24.130 1.00 54.93 C
ATOM 16 N7 A B 371 92.936 96.904 24.475 1.00 54.17 N
ATOM 17 C5 A B 371 93.301 95.624 24.087 1.00 53.51 C
ATOM 18 C6 A B 371 94.513 94.917 24.177 1.00 53.12 C
ATOM 19 N6 A B 371 95.625 95.419 24.713 1.00 50.41 N
ATOM 20 N1 A B 371 94.543 93.654 23.689 1.00 54.13 N
ATOM 21 C2 A B 371 93.424 93.148 23.153 1.00 53.29 C
ATOM 22 N3 A B 371 92.224 93.712 23.014 1.00 53.04 N
ATOM 23 C4 A B 371 92.229 94.963 23.506 1.00 54.49 C
ATOM 24 P G B 372 86.950 94.877 26.891 1.00 57.68 P
ATOM 25 OP1 G B 372 85.735 94.054 27.111 1.00 59.73 O
ATOM 26 OP2 G B 372 87.120 96.137 27.654 1.00 60.16 O
ATOM 27 O5' G B 372 88.229 93.968 27.162 1.00 55.40 O
TER

Atoms:
OP1: (104.919,95.842,27.339)
OP2: (104.036,98.245,27.527)
C3': (100.572,95.637,24.950)
C1': (98.756,96.099,26.386)
C5': (102.122,94.984,26.891)
O6: (97.587,101.880,27.464)
O4': (99.769,95.459,27.147)
C8: (99.837,98.260,27.154)
C2: (95.621,99.126,26.369)
C6: (97.324,100.722,27.133)
C5: (98.191,99.607,27.081)
C4: (97.689,98.386,26.680)
P: (103.851,96.787,27.758)
C4': (100.757,94.878,26.257)
C2': (99.064,95.833,24.908)
O2': (98.394,94.661,24.503)
N1: (96.030,100.384,26.748)
N2: (94.318,98.991,26.051)
N3: (96.427,98.076,26.312)
N7: (99.544,99.512,27.376)
N9: (98.759,97.520,26.727)
O5': (102.483,96.367,27.055)
O3': (101.059,94.875,23.849)
OP1: (86.992,100.299,26.138)
OP2: (89.462,100.149,26.847)
C3': (88.206,95.735,24.745)
C1': (89.829,95.587,23.034)
C5': (87.564,98.150,24.167)
O4': (89.138,96.822,22.897)
C8: (91.671,96.990,24.130)
O2': (88.152,93.893,23.160)
C6: (94.513,94.917,24.177)
C5: (93.301,95.624,24.087)
C4: (92.229,94.963,23.506)
P: (88.413,100.030,25.793)
C4': (87.912,96.771,23.672)
C2': (88.992,94.696,23.958)
C2: (93.424,93.148,23.153)
N1: (94.543,93.654,23.689)
N3: (92.224,93.712,23.014)
N6: (95.625,95.419,24.713)
N7: (92.936,96.904,24.475)
N9: (91.179,95.849,23.538)
O5': (88.505,98.571,25.168)
O3': (87.014,95.202,25.312)
Image (generated by PyMOL):
PyMOL image
show in jmol