ClaRNA

Doublet info:

Details

Nucleotide types: AC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3U5D:1810:1837

Extra

PDB:
ATOM 1 O3' U A 809 13.582 36.860 98.156 1.00 46.40 O
ATOM 2 P A A 810 14.687 35.727 97.980 1.00 46.99 P
ATOM 3 OP1 A A 810 15.839 36.343 97.289 1.00 46.91 O
ATOM 4 OP2 A A 810 14.050 34.552 97.349 1.00 46.60 O
ATOM 5 O5' A A 810 15.068 35.406 99.488 1.00 47.16 O
ATOM 6 C5' A A 810 15.940 36.247 100.221 1.00 47.47 C
ATOM 7 C4' A A 810 15.992 35.837 101.660 1.00 47.66 C
ATOM 8 O4' A A 810 14.659 35.907 102.225 1.00 47.96 O
ATOM 9 C3' A A 810 16.402 34.409 101.914 1.00 47.25 C
ATOM 10 O3' A A 810 17.791 34.203 101.848 1.00 47.03 O
ATOM 11 C2' A A 810 15.786 34.106 103.278 1.00 47.54 C
ATOM 12 O2' A A 810 16.568 34.616 104.341 1.00 47.86 O
ATOM 13 C1' A A 810 14.486 34.889 103.198 1.00 47.90 C
ATOM 14 N9 A A 810 13.384 34.005 102.785 1.00 47.67 N
ATOM 15 C8 A A 810 12.743 33.885 101.586 1.00 47.45 C
ATOM 16 N7 A A 810 11.846 32.913 101.570 1.00 47.28 N
ATOM 17 C5 A A 810 11.919 32.362 102.839 1.00 47.40 C
ATOM 18 C6 A A 810 11.240 31.310 103.469 1.00 47.34 C
ATOM 19 N6 A A 810 10.314 30.590 102.896 1.00 47.13 N
ATOM 20 N1 A A 810 11.557 31.019 104.746 1.00 47.52 N
ATOM 21 C2 A A 810 12.501 31.758 105.369 1.00 47.75 C
ATOM 22 N3 A A 810 13.218 32.751 104.869 1.00 47.82 N
ATOM 23 C4 A A 810 12.877 33.017 103.593 1.00 47.64 C
ATOM 24 P G A 811 18.381 33.006 100.925 1.00 46.10 P
ATOM 25 OP1 G A 811 19.872 33.031 101.078 1.00 45.99 O
ATOM 26 OP2 G A 811 17.807 33.194 99.551 1.00 45.91 O
ATOM 27 O5' G A 811 17.757 31.683 101.639 1.00 45.95 O
TER

ATOM 1 O3' U B 836 4.057 25.598 98.916 1.00 42.21 O
ATOM 2 P C B 837 3.254 26.910 99.310 1.00 47.22 P
ATOM 3 OP1 C B 837 1.918 26.514 99.915 1.00 47.46 O
ATOM 4 OP2 C B 837 3.311 27.671 98.137 1.00 47.17 O
ATOM 5 O5' C B 837 4.147 27.598 100.398 1.00 47.46 O
ATOM 6 C5' C B 837 4.687 26.844 101.459 1.00 47.40 C
ATOM 7 C4' C B 837 5.802 27.589 102.074 1.00 47.55 C
ATOM 8 O4' C B 837 6.837 27.796 101.090 1.00 47.23 O
ATOM 9 C3' C B 837 5.448 28.977 102.563 1.00 48.07 C
ATOM 10 O3' C B 837 4.948 28.916 103.874 1.00 48.42 O
ATOM 11 C2' C B 837 6.784 29.659 102.528 1.00 48.04 C
ATOM 12 O2' C B 837 7.527 29.260 103.661 1.00 48.08 O
ATOM 13 C1' C B 837 7.445 29.035 101.309 1.00 47.51 C
ATOM 14 N1 C B 837 7.286 29.858 100.100 1.00 47.50 N
ATOM 15 C2 C B 837 8.233 30.834 99.780 1.00 47.55 C
ATOM 16 O2 C B 837 9.211 31.046 100.502 1.00 47.62 O
ATOM 17 N3 C B 837 8.051 31.548 98.654 1.00 47.55 N
ATOM 18 C4 C B 837 7.030 31.344 97.854 1.00 47.49 C
ATOM 19 N4 C B 837 6.939 32.092 96.776 1.00 47.51 N
ATOM 20 C5 C B 837 6.075 30.363 98.147 1.00 47.43 C
ATOM 21 C6 C B 837 6.236 29.643 99.261 1.00 47.43 C
ATOM 22 P G B 838 3.480 29.382 104.293 1.00 50.83 P
ATOM 23 OP1 G B 838 2.535 28.939 103.245 1.00 50.63 O
ATOM 24 OP2 G B 838 3.572 30.831 104.644 1.00 51.29 O
ATOM 25 O5' G B 838 3.259 28.526 105.582 1.00 50.94 O
TER

Atoms:
OP1: (15.839,36.343,97.289)
OP2: (14.050,34.552,97.349)
C3': (16.402,34.409,101.914)
C1': (14.486,34.889,103.198)
C5': (15.940,36.247,100.221)
O4': (14.659,35.907,102.225)
C8: (12.743,33.885,101.586)
O2': (16.568,34.616,104.341)
C6: (11.240,31.310,103.469)
C5: (11.919,32.362,102.839)
C4: (12.877,33.017,103.593)
P: (14.687,35.727,97.980)
C4': (15.992,35.837,101.660)
C2': (15.786,34.106,103.278)
C2: (12.501,31.758,105.369)
N1: (11.557,31.019,104.746)
N3: (13.218,32.751,104.869)
N6: (10.314,30.590,102.896)
N7: (11.846,32.913,101.570)
N9: (13.384,34.005,102.785)
O5': (15.068,35.406,99.488)
O3': (17.791,34.203,101.848)
C2: (8.233,30.834,99.780)
OP1: (1.918,26.514,99.915)
OP2: (3.311,27.671,98.137)
C4: (7.030,31.344,97.854)
O5': (4.147,27.598,100.398)
C3': (5.448,28.977,102.563)
C1': (7.445,29.035,101.309)
O4': (6.837,27.796,101.090)
C5': (4.687,26.844,101.459)
P: (3.254,26.910,99.310)
O2: (9.211,31.046,100.502)
C4': (5.802,27.589,102.074)
C2': (6.784,29.659,102.528)
O2': (7.527,29.260,103.661)
N1: (7.286,29.858,100.100)
N3: (8.051,31.548,98.654)
N4: (6.939,32.092,96.776)
C6: (6.236,29.643,99.261)
C5: (6.075,30.363,98.147)
O3': (4.948,28.916,103.874)
Image (generated by PyMOL):
PyMOL image
show in jmol