ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQN:069:088

Extra

PDB:
ATOM 1 O3' G A 68 30.526 149.432 19.894 1.00 58.52 O
ATOM 2 P G A 69 29.149 150.064 19.367 1.00 59.31 P
ATOM 3 OP1 G A 69 28.027 149.286 19.971 1.00 60.22 O
ATOM 4 OP2 G A 69 29.246 150.189 17.889 1.00 60.71 O
ATOM 5 O5' G A 69 29.118 151.516 20.011 1.00 55.72 O
ATOM 6 C5' G A 69 29.102 151.686 21.437 1.00 54.40 C
ATOM 7 C4' G A 69 29.448 153.110 21.786 1.00 54.59 C
ATOM 8 O4' G A 69 30.776 153.408 21.281 1.00 54.19 O
ATOM 9 C3' G A 69 28.544 154.161 21.159 1.00 53.55 C
ATOM 10 O3' G A 69 27.375 154.340 21.966 1.00 53.85 O
ATOM 11 C2' G A 69 29.458 155.380 21.093 1.00 52.31 C
ATOM 12 O2' G A 69 29.581 156.038 22.329 1.00 50.71 O
ATOM 13 C1' G A 69 30.805 154.730 20.766 1.00 54.38 C
ATOM 14 N9 G A 69 31.119 154.661 19.338 1.00 56.25 N
ATOM 15 C8 G A 69 30.573 153.814 18.403 1.00 55.42 C
ATOM 16 N7 G A 69 31.077 153.975 17.210 1.00 56.56 N
ATOM 17 C5 G A 69 32.010 154.993 17.364 1.00 57.05 C
ATOM 18 C6 G A 69 32.880 155.602 16.416 1.00 57.74 C
ATOM 19 O6 G A 69 33.019 155.346 15.211 1.00 59.96 O
ATOM 20 N1 G A 69 33.648 156.602 16.999 1.00 57.71 N
ATOM 21 C2 G A 69 33.597 156.970 18.317 1.00 56.36 C
ATOM 22 N2 G A 69 34.409 157.968 18.686 1.00 54.56 N
ATOM 23 N3 G A 69 32.806 156.405 19.210 1.00 56.97 N
ATOM 24 C4 G A 69 32.043 155.432 18.669 1.00 56.63 C
ATOM 25 P A A 70 26.265 155.437 21.569 1.00 54.88 P
ATOM 26 OP1 A A 70 24.938 154.923 22.010 1.00 52.86 O
ATOM 27 OP2 A A 70 26.472 155.805 20.139 1.00 55.70 O
ATOM 28 O5' A A 70 26.618 156.693 22.490 1.00 53.24 O
TER

ATOM 1 O3' G B 87 36.771 159.510 17.914 1.00 60.78 O
ATOM 2 P A B 88 38.060 158.585 18.158 1.00 59.32 P
ATOM 3 OP1 A B 88 39.111 158.950 17.175 1.00 61.24 O
ATOM 4 OP2 A B 88 37.614 157.176 18.252 1.00 60.29 O
ATOM 5 O5' A B 88 38.556 159.029 19.604 1.00 60.78 O
ATOM 6 C5' A B 88 39.321 160.231 19.790 1.00 59.14 C
ATOM 7 C4' A B 88 39.150 160.735 21.199 1.00 59.10 C
ATOM 8 O4' A B 88 37.807 161.268 21.378 1.00 59.97 O
ATOM 9 C3' A B 88 39.271 159.674 22.281 1.00 57.67 C
ATOM 10 O3' A B 88 40.620 159.384 22.603 1.00 56.36 O
ATOM 11 C2' A B 88 38.514 160.316 23.431 1.00 58.08 C
ATOM 12 O2' A B 88 39.268 161.316 24.077 1.00 57.93 O
ATOM 13 C1' A B 88 37.343 160.958 22.686 1.00 58.52 C
ATOM 14 N9 A B 88 36.248 160.000 22.562 1.00 58.49 N
ATOM 15 C8 A B 88 35.910 159.247 21.465 1.00 58.37 C
ATOM 16 N7 A B 88 34.910 158.431 21.672 1.00 58.68 N
ATOM 17 C5 A B 88 34.557 158.666 22.992 1.00 60.62 C
ATOM 18 C6 A B 88 33.570 158.103 23.821 1.00 60.72 C
ATOM 19 N6 A B 88 32.739 157.137 23.425 1.00 59.81 N
ATOM 20 N1 A B 88 33.473 158.567 25.088 1.00 60.78 N
ATOM 21 C2 A B 88 34.324 159.522 25.487 1.00 61.47 C
ATOM 22 N3 A B 88 35.303 160.121 24.805 1.00 61.03 N
ATOM 23 C4 A B 88 35.365 159.642 23.549 1.00 60.34 C
ATOM 24 P A B 89 41.049 157.871 22.925 1.00 55.86 P
ATOM 25 OP1 A B 89 42.504 157.880 23.224 1.00 56.38 O
ATOM 26 OP2 A B 89 40.535 156.978 21.855 1.00 56.91 O
ATOM 27 O5' A B 89 40.229 157.525 24.249 1.00 55.58 O
TER

Atoms:
OP1: (28.027,149.286,19.971)
OP2: (29.246,150.189,17.889)
C3': (28.544,154.161,21.159)
C1': (30.805,154.730,20.766)
C5': (29.102,151.686,21.437)
O6: (33.019,155.346,15.211)
O4': (30.776,153.408,21.281)
C8: (30.573,153.814,18.403)
C2: (33.597,156.970,18.317)
C6: (32.880,155.602,16.416)
C5: (32.010,154.993,17.364)
C4: (32.043,155.432,18.669)
P: (29.149,150.064,19.367)
C4': (29.448,153.110,21.786)
C2': (29.458,155.380,21.093)
O2': (29.581,156.038,22.329)
N1: (33.648,156.602,16.999)
N2: (34.409,157.968,18.686)
N3: (32.806,156.405,19.210)
N7: (31.077,153.975,17.210)
N9: (31.119,154.661,19.338)
O5': (29.118,151.516,20.011)
O3': (27.375,154.340,21.966)
OP1: (39.111,158.950,17.175)
OP2: (37.614,157.176,18.252)
C3': (39.271,159.674,22.281)
C1': (37.343,160.958,22.686)
C5': (39.321,160.231,19.790)
O4': (37.807,161.268,21.378)
C8: (35.910,159.247,21.465)
O2': (39.268,161.316,24.077)
C6: (33.570,158.103,23.821)
C5: (34.557,158.666,22.992)
C4: (35.365,159.642,23.549)
P: (38.060,158.585,18.158)
C4': (39.150,160.735,21.199)
C2': (38.514,160.316,23.431)
C2: (34.324,159.522,25.487)
N1: (33.473,158.567,25.088)
N3: (35.303,160.121,24.805)
N6: (32.739,157.137,23.425)
N7: (34.910,158.431,21.672)
N9: (36.248,160.000,22.562)
O5': (38.556,159.029,19.604)
O3': (40.620,159.384,22.603)
Image (generated by PyMOL):
PyMOL image
show in jmol