Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3NVI:E4:E18
Extra
PDB:
ATOM 1 O3' U A 3 -6.319 -12.906 -6.645 1.00 82.17 O
ATOM 2 P G A 4 -5.112 -12.689 -7.683 1.00 97.22 P
ATOM 3 OP1 G A 4 -5.649 -12.993 -9.034 1.00 99.76 O
ATOM 4 OP2 G A 4 -3.950 -13.472 -7.183 1.00 87.52 O
ATOM 5 O5' G A 4 -4.810 -11.132 -7.561 1.00 90.60 O
ATOM 6 C5' G A 4 -5.833 -10.213 -7.194 1.00 89.17 C
ATOM 7 C4' G A 4 -5.247 -8.985 -6.552 1.00 87.21 C
ATOM 8 O4' G A 4 -4.730 -9.352 -5.240 1.00 87.57 O
ATOM 9 C3' G A 4 -4.076 -8.374 -7.317 1.00 84.41 C
ATOM 10 O3' G A 4 -4.085 -6.955 -7.180 1.00 90.49 O
ATOM 11 C2' G A 4 -2.864 -8.956 -6.606 1.00 81.55 C
ATOM 12 O2' G A 4 -1.686 -8.182 -6.709 1.00 84.24 O
ATOM 13 C1' G A 4 -3.354 -9.051 -5.166 1.00 81.82 C
ATOM 14 N9 G A 4 -2.664 -10.094 -4.397 1.00 75.40 N
ATOM 15 C8 G A 4 -2.238 -11.301 -4.894 1.00 73.18 C
ATOM 16 N7 G A 4 -1.561 -12.004 -4.037 1.00 72.83 N
ATOM 17 C5 G A 4 -1.511 -11.187 -2.914 1.00 71.81 C
ATOM 18 C6 G A 4 -0.897 -11.413 -1.661 1.00 68.86 C
ATOM 19 O6 G A 4 -0.274 -12.421 -1.294 1.00 78.54 O
ATOM 20 N1 G A 4 -1.075 -10.332 -0.803 1.00 65.59 N
ATOM 21 C2 G A 4 -1.757 -9.179 -1.114 1.00 64.18 C
ATOM 22 N2 G A 4 -1.813 -8.260 -0.149 1.00 62.89 N
ATOM 23 N3 G A 4 -2.333 -8.946 -2.275 1.00 60.95 N
ATOM 24 C4 G A 4 -2.175 -9.995 -3.117 1.00 70.94 C
ATOM 25 P A A 5 -3.888 -6.029 -8.484 1.00 97.97 P
ATOM 26 OP1 A A 5 -4.890 -6.493 -9.499 1.00 83.09 O
ATOM 27 OP2 A A 5 -2.432 -6.062 -8.835 1.00 85.42 O
ATOM 28 O5' A A 5 -4.280 -4.582 -7.952 1.00 87.24 O
TER
ATOM 1 O3' G B 17 -1.099 -4.918 3.305 1.00 71.33 O
ATOM 2 P A B 18 -2.309 -5.065 4.341 1.00 72.22 P
ATOM 3 OP1 A B 18 -1.736 -4.862 5.698 1.00 80.27 O
ATOM 4 OP2 A B 18 -2.986 -6.328 4.041 1.00 66.92 O
ATOM 5 O5' A B 18 -3.273 -3.861 3.965 1.00 79.99 O
ATOM 6 C5' A B 18 -2.782 -2.626 3.478 1.00 78.60 C
ATOM 7 C4' A B 18 -3.860 -1.887 2.713 1.00 73.34 C
ATOM 8 O4' A B 18 -3.506 -1.850 1.309 1.00 74.15 O
ATOM 9 C3' A B 18 -5.256 -2.513 2.755 1.00 76.10 C
ATOM 10 O3' A B 18 -6.034 -2.067 3.873 1.00 78.44 O
ATOM 11 C2' A B 18 -5.850 -2.133 1.400 1.00 78.18 C
ATOM 12 O2' A B 18 -6.368 -0.811 1.426 1.00 86.74 O
ATOM 13 C1' A B 18 -4.618 -2.136 0.507 1.00 71.76 C
ATOM 14 N9 A B 18 -4.393 -3.443 -0.128 1.00 73.82 N
ATOM 15 C8 A B 18 -3.394 -4.319 0.208 1.00 65.98 C
ATOM 16 N7 A B 18 -3.421 -5.395 -0.529 1.00 66.47 N
ATOM 17 C5 A B 18 -4.480 -5.227 -1.398 1.00 65.02 C
ATOM 18 C6 A B 18 -5.016 -6.038 -2.414 1.00 69.31 C
ATOM 19 N6 A B 18 -4.516 -7.226 -2.732 1.00 71.60 N
ATOM 20 N1 A B 18 -6.089 -5.590 -3.111 1.00 73.95 N
ATOM 21 C2 A B 18 -6.586 -4.383 -2.793 1.00 73.99 C
ATOM 22 N3 A B 18 -6.171 -3.526 -1.848 1.00 76.65 N
ATOM 23 C4 A B 18 -5.096 -4.012 -1.176 1.00 74.52 C
ATOM 24 P U B 19 -7.297 -2.927 4.423 1.00 78.65 P
ATOM 25 OP1 U B 19 -8.157 -2.001 5.211 1.00 87.03 O
ATOM 26 OP2 U B 19 -6.751 -4.117 5.097 1.00 85.08 O
ATOM 27 O5' U B 19 -8.062 -3.352 3.092 1.00 70.80 O
TER
ATOM 2 P G A 4 -5.112 -12.689 -7.683 1.00 97.22 P
ATOM 3 OP1 G A 4 -5.649 -12.993 -9.034 1.00 99.76 O
ATOM 4 OP2 G A 4 -3.950 -13.472 -7.183 1.00 87.52 O
ATOM 5 O5' G A 4 -4.810 -11.132 -7.561 1.00 90.60 O
ATOM 6 C5' G A 4 -5.833 -10.213 -7.194 1.00 89.17 C
ATOM 7 C4' G A 4 -5.247 -8.985 -6.552 1.00 87.21 C
ATOM 8 O4' G A 4 -4.730 -9.352 -5.240 1.00 87.57 O
ATOM 9 C3' G A 4 -4.076 -8.374 -7.317 1.00 84.41 C
ATOM 10 O3' G A 4 -4.085 -6.955 -7.180 1.00 90.49 O
ATOM 11 C2' G A 4 -2.864 -8.956 -6.606 1.00 81.55 C
ATOM 12 O2' G A 4 -1.686 -8.182 -6.709 1.00 84.24 O
ATOM 13 C1' G A 4 -3.354 -9.051 -5.166 1.00 81.82 C
ATOM 14 N9 G A 4 -2.664 -10.094 -4.397 1.00 75.40 N
ATOM 15 C8 G A 4 -2.238 -11.301 -4.894 1.00 73.18 C
ATOM 16 N7 G A 4 -1.561 -12.004 -4.037 1.00 72.83 N
ATOM 17 C5 G A 4 -1.511 -11.187 -2.914 1.00 71.81 C
ATOM 18 C6 G A 4 -0.897 -11.413 -1.661 1.00 68.86 C
ATOM 19 O6 G A 4 -0.274 -12.421 -1.294 1.00 78.54 O
ATOM 20 N1 G A 4 -1.075 -10.332 -0.803 1.00 65.59 N
ATOM 21 C2 G A 4 -1.757 -9.179 -1.114 1.00 64.18 C
ATOM 22 N2 G A 4 -1.813 -8.260 -0.149 1.00 62.89 N
ATOM 23 N3 G A 4 -2.333 -8.946 -2.275 1.00 60.95 N
ATOM 24 C4 G A 4 -2.175 -9.995 -3.117 1.00 70.94 C
ATOM 25 P A A 5 -3.888 -6.029 -8.484 1.00 97.97 P
ATOM 26 OP1 A A 5 -4.890 -6.493 -9.499 1.00 83.09 O
ATOM 27 OP2 A A 5 -2.432 -6.062 -8.835 1.00 85.42 O
ATOM 28 O5' A A 5 -4.280 -4.582 -7.952 1.00 87.24 O
TER
ATOM 1 O3' G B 17 -1.099 -4.918 3.305 1.00 71.33 O
ATOM 2 P A B 18 -2.309 -5.065 4.341 1.00 72.22 P
ATOM 3 OP1 A B 18 -1.736 -4.862 5.698 1.00 80.27 O
ATOM 4 OP2 A B 18 -2.986 -6.328 4.041 1.00 66.92 O
ATOM 5 O5' A B 18 -3.273 -3.861 3.965 1.00 79.99 O
ATOM 6 C5' A B 18 -2.782 -2.626 3.478 1.00 78.60 C
ATOM 7 C4' A B 18 -3.860 -1.887 2.713 1.00 73.34 C
ATOM 8 O4' A B 18 -3.506 -1.850 1.309 1.00 74.15 O
ATOM 9 C3' A B 18 -5.256 -2.513 2.755 1.00 76.10 C
ATOM 10 O3' A B 18 -6.034 -2.067 3.873 1.00 78.44 O
ATOM 11 C2' A B 18 -5.850 -2.133 1.400 1.00 78.18 C
ATOM 12 O2' A B 18 -6.368 -0.811 1.426 1.00 86.74 O
ATOM 13 C1' A B 18 -4.618 -2.136 0.507 1.00 71.76 C
ATOM 14 N9 A B 18 -4.393 -3.443 -0.128 1.00 73.82 N
ATOM 15 C8 A B 18 -3.394 -4.319 0.208 1.00 65.98 C
ATOM 16 N7 A B 18 -3.421 -5.395 -0.529 1.00 66.47 N
ATOM 17 C5 A B 18 -4.480 -5.227 -1.398 1.00 65.02 C
ATOM 18 C6 A B 18 -5.016 -6.038 -2.414 1.00 69.31 C
ATOM 19 N6 A B 18 -4.516 -7.226 -2.732 1.00 71.60 N
ATOM 20 N1 A B 18 -6.089 -5.590 -3.111 1.00 73.95 N
ATOM 21 C2 A B 18 -6.586 -4.383 -2.793 1.00 73.99 C
ATOM 22 N3 A B 18 -6.171 -3.526 -1.848 1.00 76.65 N
ATOM 23 C4 A B 18 -5.096 -4.012 -1.176 1.00 74.52 C
ATOM 24 P U B 19 -7.297 -2.927 4.423 1.00 78.65 P
ATOM 25 OP1 U B 19 -8.157 -2.001 5.211 1.00 87.03 O
ATOM 26 OP2 U B 19 -6.751 -4.117 5.097 1.00 85.08 O
ATOM 27 O5' U B 19 -8.062 -3.352 3.092 1.00 70.80 O
TER
Atoms:
OP1: (-5.649,-12.993,-9.034)
OP2: (-3.950,-13.472,-7.183)
C3': (-4.076,-8.374,-7.317)
C1': (-3.354,-9.051,-5.166)
C5': (-5.833,-10.213,-7.194)
O6: (-0.274,-12.421,-1.294)
O4': (-4.730,-9.352,-5.240)
C8: (-2.238,-11.301,-4.894)
C2: (-1.757,-9.179,-1.114)
C6: (-0.897,-11.413,-1.661)
C5: (-1.511,-11.187,-2.914)
C4: (-2.175,-9.995,-3.117)
P: (-5.112,-12.689,-7.683)
C4': (-5.247,-8.985,-6.552)
C2': (-2.864,-8.956,-6.606)
O2': (-1.686,-8.182,-6.709)
N1: (-1.075,-10.332,-0.803)
N2: (-1.813,-8.260,-0.149)
N3: (-2.333,-8.946,-2.275)
N7: (-1.561,-12.004,-4.037)
N9: (-2.664,-10.094,-4.397)
O5': (-4.810,-11.132,-7.561)
O3': (-4.085,-6.955,-7.180)
OP2: (-3.950,-13.472,-7.183)
C3': (-4.076,-8.374,-7.317)
C1': (-3.354,-9.051,-5.166)
C5': (-5.833,-10.213,-7.194)
O6: (-0.274,-12.421,-1.294)
O4': (-4.730,-9.352,-5.240)
C8: (-2.238,-11.301,-4.894)
C2: (-1.757,-9.179,-1.114)
C6: (-0.897,-11.413,-1.661)
C5: (-1.511,-11.187,-2.914)
C4: (-2.175,-9.995,-3.117)
P: (-5.112,-12.689,-7.683)
C4': (-5.247,-8.985,-6.552)
C2': (-2.864,-8.956,-6.606)
O2': (-1.686,-8.182,-6.709)
N1: (-1.075,-10.332,-0.803)
N2: (-1.813,-8.260,-0.149)
N3: (-2.333,-8.946,-2.275)
N7: (-1.561,-12.004,-4.037)
N9: (-2.664,-10.094,-4.397)
O5': (-4.810,-11.132,-7.561)
O3': (-4.085,-6.955,-7.180)
OP1: (-1.736,-4.862,5.698)
OP2: (-2.986,-6.328,4.041)
C3': (-5.256,-2.513,2.755)
C1': (-4.618,-2.136,0.507)
C5': (-2.782,-2.626,3.478)
O4': (-3.506,-1.850,1.309)
C8: (-3.394,-4.319,0.208)
O2': (-6.368,-0.811,1.426)
C6: (-5.016,-6.038,-2.414)
C5: (-4.480,-5.227,-1.398)
C4: (-5.096,-4.012,-1.176)
P: (-2.309,-5.065,4.341)
C4': (-3.860,-1.887,2.713)
C2': (-5.850,-2.133,1.400)
C2: (-6.586,-4.383,-2.793)
N1: (-6.089,-5.590,-3.111)
N3: (-6.171,-3.526,-1.848)
N6: (-4.516,-7.226,-2.732)
N7: (-3.421,-5.395,-0.529)
N9: (-4.393,-3.443,-0.128)
O5': (-3.273,-3.861,3.965)
O3': (-6.034,-2.067,3.873)
OP2: (-2.986,-6.328,4.041)
C3': (-5.256,-2.513,2.755)
C1': (-4.618,-2.136,0.507)
C5': (-2.782,-2.626,3.478)
O4': (-3.506,-1.850,1.309)
C8: (-3.394,-4.319,0.208)
O2': (-6.368,-0.811,1.426)
C6: (-5.016,-6.038,-2.414)
C5: (-4.480,-5.227,-1.398)
C4: (-5.096,-4.012,-1.176)
P: (-2.309,-5.065,4.341)
C4': (-3.860,-1.887,2.713)
C2': (-5.850,-2.133,1.400)
C2: (-6.586,-4.383,-2.793)
N1: (-6.089,-5.590,-3.111)
N3: (-6.171,-3.526,-1.848)
N6: (-4.516,-7.226,-2.732)
N7: (-3.421,-5.395,-0.529)
N9: (-4.393,-3.443,-0.128)
O5': (-3.273,-3.861,3.965)
O3': (-6.034,-2.067,3.873)
Image (generated by PyMOL):