Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:0333:0319
Extra
PDB:
ATOM 1 O3' C A 332 26.211 141.725 27.075 1.00 41.90 O
ATOM 2 P G A 333 26.416 140.711 25.855 1.00 43.43 P
ATOM 3 OP1 G A 333 27.344 141.354 24.894 1.00 45.26 O
ATOM 4 OP2 G A 333 25.084 140.243 25.398 1.00 42.03 O
ATOM 5 O5' G A 333 27.190 139.483 26.502 1.00 45.12 O
ATOM 6 C5' G A 333 26.964 138.134 26.055 1.00 44.22 C
ATOM 7 C4' G A 333 26.822 137.218 27.248 1.00 44.98 C
ATOM 8 O4' G A 333 25.696 137.650 28.059 1.00 45.01 O
ATOM 9 C3' G A 333 26.545 135.758 26.938 1.00 43.40 C
ATOM 10 O3' G A 333 27.769 135.078 26.701 1.00 42.78 O
ATOM 11 C2' G A 333 25.869 135.291 28.219 1.00 44.94 C
ATOM 12 O2' G A 333 26.807 135.083 29.258 1.00 42.34 O
ATOM 13 C1' G A 333 25.024 136.520 28.582 1.00 46.57 C
ATOM 14 N9 G A 333 23.656 136.534 28.059 1.00 49.67 N
ATOM 15 C8 G A 333 23.071 137.540 27.325 1.00 50.29 C
ATOM 16 N7 G A 333 21.827 137.298 27.018 1.00 51.22 N
ATOM 17 C5 G A 333 21.570 136.054 27.578 1.00 52.66 C
ATOM 18 C6 G A 333 20.380 135.274 27.581 1.00 53.16 C
ATOM 19 O6 G A 333 19.281 135.539 27.083 1.00 53.24 O
ATOM 20 N1 G A 333 20.559 134.074 28.257 1.00 53.34 N
ATOM 21 C2 G A 333 21.727 133.672 28.854 1.00 53.37 C
ATOM 22 N2 G A 333 21.700 132.473 29.451 1.00 54.36 N
ATOM 23 N3 G A 333 22.839 134.390 28.865 1.00 52.09 N
ATOM 24 C4 G A 333 22.691 135.562 28.215 1.00 51.06 C
ATOM 25 P U A 334 27.834 133.890 25.626 1.00 45.21 P
ATOM 26 OP1 U A 334 29.163 133.244 25.732 1.00 46.73 O
ATOM 27 OP2 U A 334 27.386 134.415 24.313 1.00 46.13 O
ATOM 28 O5' U A 334 26.745 132.855 26.145 1.00 47.16 O
TER
ATOM 1 O3' C B 318 18.332 124.877 32.106 1.00 48.14 O
ATOM 2 P A B 319 19.840 124.344 32.232 1.00 48.91 P
ATOM 3 OP1 A B 319 20.465 124.325 30.888 1.00 49.79 O
ATOM 4 OP2 A B 319 19.811 123.100 33.034 1.00 49.87 O
ATOM 5 O5' A B 319 20.541 125.477 33.104 1.00 47.36 O
ATOM 6 C5' A B 319 21.280 126.539 32.479 1.00 43.30 C
ATOM 7 C4' A B 319 22.740 126.416 32.823 1.00 41.13 C
ATOM 8 O4' A B 319 23.528 126.685 31.639 1.00 43.37 O
ATOM 9 C3' A B 319 23.300 127.357 33.879 1.00 39.37 C
ATOM 10 O3' A B 319 23.087 126.915 35.206 1.00 39.08 O
ATOM 11 C2' A B 319 24.775 127.320 33.539 1.00 41.43 C
ATOM 12 O2' A B 319 25.368 126.112 33.966 1.00 41.46 O
ATOM 13 C1' A B 319 24.720 127.356 32.008 1.00 43.36 C
ATOM 14 N9 A B 319 24.625 128.739 31.533 1.00 44.03 N
ATOM 15 C8 A B 319 23.507 129.408 31.095 1.00 43.24 C
ATOM 16 N7 A B 319 23.721 130.669 30.821 1.00 44.24 N
ATOM 17 C5 A B 319 25.072 130.842 31.079 1.00 43.74 C
ATOM 18 C6 A B 319 25.906 131.962 31.005 1.00 44.63 C
ATOM 19 N6 A B 319 25.480 133.176 30.653 1.00 44.07 N
ATOM 20 N1 A B 319 27.210 131.796 31.321 1.00 46.32 N
ATOM 21 C2 A B 319 27.629 130.581 31.696 1.00 44.76 C
ATOM 22 N3 A B 319 26.938 129.455 31.816 1.00 43.60 N
ATOM 23 C4 A B 319 25.648 129.656 31.491 1.00 44.03 C
ATOM 24 P G B 320 22.573 127.952 36.326 1.00 42.46 P
ATOM 25 OP1 G B 320 22.569 127.176 37.590 1.00 41.06 O
ATOM 26 OP2 G B 320 21.326 128.637 35.882 1.00 42.15 O
ATOM 27 O5' G B 320 23.713 129.062 36.407 1.00 43.17 O
TER
ATOM 2 P G A 333 26.416 140.711 25.855 1.00 43.43 P
ATOM 3 OP1 G A 333 27.344 141.354 24.894 1.00 45.26 O
ATOM 4 OP2 G A 333 25.084 140.243 25.398 1.00 42.03 O
ATOM 5 O5' G A 333 27.190 139.483 26.502 1.00 45.12 O
ATOM 6 C5' G A 333 26.964 138.134 26.055 1.00 44.22 C
ATOM 7 C4' G A 333 26.822 137.218 27.248 1.00 44.98 C
ATOM 8 O4' G A 333 25.696 137.650 28.059 1.00 45.01 O
ATOM 9 C3' G A 333 26.545 135.758 26.938 1.00 43.40 C
ATOM 10 O3' G A 333 27.769 135.078 26.701 1.00 42.78 O
ATOM 11 C2' G A 333 25.869 135.291 28.219 1.00 44.94 C
ATOM 12 O2' G A 333 26.807 135.083 29.258 1.00 42.34 O
ATOM 13 C1' G A 333 25.024 136.520 28.582 1.00 46.57 C
ATOM 14 N9 G A 333 23.656 136.534 28.059 1.00 49.67 N
ATOM 15 C8 G A 333 23.071 137.540 27.325 1.00 50.29 C
ATOM 16 N7 G A 333 21.827 137.298 27.018 1.00 51.22 N
ATOM 17 C5 G A 333 21.570 136.054 27.578 1.00 52.66 C
ATOM 18 C6 G A 333 20.380 135.274 27.581 1.00 53.16 C
ATOM 19 O6 G A 333 19.281 135.539 27.083 1.00 53.24 O
ATOM 20 N1 G A 333 20.559 134.074 28.257 1.00 53.34 N
ATOM 21 C2 G A 333 21.727 133.672 28.854 1.00 53.37 C
ATOM 22 N2 G A 333 21.700 132.473 29.451 1.00 54.36 N
ATOM 23 N3 G A 333 22.839 134.390 28.865 1.00 52.09 N
ATOM 24 C4 G A 333 22.691 135.562 28.215 1.00 51.06 C
ATOM 25 P U A 334 27.834 133.890 25.626 1.00 45.21 P
ATOM 26 OP1 U A 334 29.163 133.244 25.732 1.00 46.73 O
ATOM 27 OP2 U A 334 27.386 134.415 24.313 1.00 46.13 O
ATOM 28 O5' U A 334 26.745 132.855 26.145 1.00 47.16 O
TER
ATOM 1 O3' C B 318 18.332 124.877 32.106 1.00 48.14 O
ATOM 2 P A B 319 19.840 124.344 32.232 1.00 48.91 P
ATOM 3 OP1 A B 319 20.465 124.325 30.888 1.00 49.79 O
ATOM 4 OP2 A B 319 19.811 123.100 33.034 1.00 49.87 O
ATOM 5 O5' A B 319 20.541 125.477 33.104 1.00 47.36 O
ATOM 6 C5' A B 319 21.280 126.539 32.479 1.00 43.30 C
ATOM 7 C4' A B 319 22.740 126.416 32.823 1.00 41.13 C
ATOM 8 O4' A B 319 23.528 126.685 31.639 1.00 43.37 O
ATOM 9 C3' A B 319 23.300 127.357 33.879 1.00 39.37 C
ATOM 10 O3' A B 319 23.087 126.915 35.206 1.00 39.08 O
ATOM 11 C2' A B 319 24.775 127.320 33.539 1.00 41.43 C
ATOM 12 O2' A B 319 25.368 126.112 33.966 1.00 41.46 O
ATOM 13 C1' A B 319 24.720 127.356 32.008 1.00 43.36 C
ATOM 14 N9 A B 319 24.625 128.739 31.533 1.00 44.03 N
ATOM 15 C8 A B 319 23.507 129.408 31.095 1.00 43.24 C
ATOM 16 N7 A B 319 23.721 130.669 30.821 1.00 44.24 N
ATOM 17 C5 A B 319 25.072 130.842 31.079 1.00 43.74 C
ATOM 18 C6 A B 319 25.906 131.962 31.005 1.00 44.63 C
ATOM 19 N6 A B 319 25.480 133.176 30.653 1.00 44.07 N
ATOM 20 N1 A B 319 27.210 131.796 31.321 1.00 46.32 N
ATOM 21 C2 A B 319 27.629 130.581 31.696 1.00 44.76 C
ATOM 22 N3 A B 319 26.938 129.455 31.816 1.00 43.60 N
ATOM 23 C4 A B 319 25.648 129.656 31.491 1.00 44.03 C
ATOM 24 P G B 320 22.573 127.952 36.326 1.00 42.46 P
ATOM 25 OP1 G B 320 22.569 127.176 37.590 1.00 41.06 O
ATOM 26 OP2 G B 320 21.326 128.637 35.882 1.00 42.15 O
ATOM 27 O5' G B 320 23.713 129.062 36.407 1.00 43.17 O
TER
Atoms:
OP1: (27.344,141.354,24.894)
OP2: (25.084,140.243,25.398)
C3': (26.545,135.758,26.938)
C1': (25.024,136.520,28.582)
C5': (26.964,138.134,26.055)
O6: (19.281,135.539,27.083)
O4': (25.696,137.650,28.059)
C8: (23.071,137.540,27.325)
C2: (21.727,133.672,28.854)
C6: (20.380,135.274,27.581)
C5: (21.570,136.054,27.578)
C4: (22.691,135.562,28.215)
P: (26.416,140.711,25.855)
C4': (26.822,137.218,27.248)
C2': (25.869,135.291,28.219)
O2': (26.807,135.083,29.258)
N1: (20.559,134.074,28.257)
N2: (21.700,132.473,29.451)
N3: (22.839,134.390,28.865)
N7: (21.827,137.298,27.018)
N9: (23.656,136.534,28.059)
O5': (27.190,139.483,26.502)
O3': (27.769,135.078,26.701)
OP2: (25.084,140.243,25.398)
C3': (26.545,135.758,26.938)
C1': (25.024,136.520,28.582)
C5': (26.964,138.134,26.055)
O6: (19.281,135.539,27.083)
O4': (25.696,137.650,28.059)
C8: (23.071,137.540,27.325)
C2: (21.727,133.672,28.854)
C6: (20.380,135.274,27.581)
C5: (21.570,136.054,27.578)
C4: (22.691,135.562,28.215)
P: (26.416,140.711,25.855)
C4': (26.822,137.218,27.248)
C2': (25.869,135.291,28.219)
O2': (26.807,135.083,29.258)
N1: (20.559,134.074,28.257)
N2: (21.700,132.473,29.451)
N3: (22.839,134.390,28.865)
N7: (21.827,137.298,27.018)
N9: (23.656,136.534,28.059)
O5': (27.190,139.483,26.502)
O3': (27.769,135.078,26.701)
OP1: (20.465,124.325,30.888)
OP2: (19.811,123.100,33.034)
C3': (23.300,127.357,33.879)
C1': (24.720,127.356,32.008)
C5': (21.280,126.539,32.479)
O4': (23.528,126.685,31.639)
C8: (23.507,129.408,31.095)
O2': (25.368,126.112,33.966)
C6: (25.906,131.962,31.005)
C5: (25.072,130.842,31.079)
C4: (25.648,129.656,31.491)
P: (19.840,124.344,32.232)
C4': (22.740,126.416,32.823)
C2': (24.775,127.320,33.539)
C2: (27.629,130.581,31.696)
N1: (27.210,131.796,31.321)
N3: (26.938,129.455,31.816)
N6: (25.480,133.176,30.653)
N7: (23.721,130.669,30.821)
N9: (24.625,128.739,31.533)
O5': (20.541,125.477,33.104)
O3': (23.087,126.915,35.206)
OP2: (19.811,123.100,33.034)
C3': (23.300,127.357,33.879)
C1': (24.720,127.356,32.008)
C5': (21.280,126.539,32.479)
O4': (23.528,126.685,31.639)
C8: (23.507,129.408,31.095)
O2': (25.368,126.112,33.966)
C6: (25.906,131.962,31.005)
C5: (25.072,130.842,31.079)
C4: (25.648,129.656,31.491)
P: (19.840,124.344,32.232)
C4': (22.740,126.416,32.823)
C2': (24.775,127.320,33.539)
C2: (27.629,130.581,31.696)
N1: (27.210,131.796,31.321)
N3: (26.938,129.455,31.816)
N6: (25.480,133.176,30.653)
N7: (23.721,130.669,30.821)
N9: (24.625,128.739,31.533)
O5': (20.541,125.477,33.104)
O3': (23.087,126.915,35.206)
Image (generated by PyMOL):