ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQ7:9101:979

Extra

PDB:
ATOM 1 O3' G A 100 36.525 62.309 109.897 1.00 52.50 O
ATOM 2 P G A 101 36.886 61.085 110.870 1.00 52.84 P
ATOM 3 OP1 G A 101 37.284 59.923 110.025 1.00 52.42 O
ATOM 4 OP2 G A 101 35.791 60.937 111.862 1.00 53.60 O
ATOM 5 O5' G A 101 38.174 61.593 111.653 1.00 53.43 O
ATOM 6 C5' G A 101 39.460 61.611 111.019 1.00 52.51 C
ATOM 7 C4' G A 101 40.502 62.090 111.989 1.00 51.75 C
ATOM 8 O4' G A 101 40.178 63.445 112.399 1.00 51.83 O
ATOM 9 C3' G A 101 40.563 61.331 113.300 1.00 51.20 C
ATOM 10 O3' G A 101 41.287 60.114 113.183 1.00 52.07 O
ATOM 11 C2' G A 101 41.234 62.349 114.209 1.00 51.66 C
ATOM 12 O2' G A 101 42.618 62.479 113.953 1.00 51.22 O
ATOM 13 C1' G A 101 40.537 63.630 113.760 1.00 51.22 C
ATOM 14 N9 G A 101 39.320 63.887 114.528 1.00 51.18 N
ATOM 15 C8 G A 101 38.023 63.635 114.143 1.00 51.45 C
ATOM 16 N7 G A 101 37.147 63.973 115.050 1.00 50.82 N
ATOM 17 C5 G A 101 37.909 64.479 116.094 1.00 50.34 C
ATOM 18 C6 G A 101 37.513 65.010 117.347 1.00 50.01 C
ATOM 19 O6 G A 101 36.371 65.157 117.793 1.00 49.82 O
ATOM 20 N1 G A 101 38.610 65.403 118.105 1.00 48.12 N
ATOM 21 C2 G A 101 39.917 65.308 117.707 1.00 47.89 C
ATOM 22 N2 G A 101 40.832 65.747 118.576 1.00 47.41 N
ATOM 23 N3 G A 101 40.300 64.821 116.541 1.00 49.05 N
ATOM 24 C4 G A 101 39.253 64.429 115.789 1.00 50.00 C
ATOM 25 P A A 102 41.186 59.011 114.349 1.00 48.30 P
ATOM 26 OP1 A A 102 41.887 57.810 113.828 1.00 49.50 O
ATOM 27 OP2 A A 102 39.776 58.894 114.799 1.00 50.14 O
ATOM 28 O5' A A 102 42.046 59.647 115.528 1.00 47.61 O
TER

ATOM 1 O3' U B 78 43.128 68.706 123.937 1.00 55.62 O
ATOM 2 P A B 79 43.309 69.904 122.890 1.00 55.63 P
ATOM 3 OP1 A B 79 43.765 71.102 123.650 1.00 53.99 O
ATOM 4 OP2 A B 79 42.065 69.983 122.082 1.00 56.40 O
ATOM 5 O5' A B 79 44.501 69.389 121.961 1.00 55.55 O
ATOM 6 C5' A B 79 45.821 69.198 122.505 1.00 52.73 C
ATOM 7 C4' A B 79 46.777 68.702 121.444 1.00 52.70 C
ATOM 8 O4' A B 79 46.494 67.323 121.099 1.00 53.53 O
ATOM 9 C3' A B 79 46.763 69.409 120.103 1.00 52.38 C
ATOM 10 O3' A B 79 47.462 70.643 120.147 1.00 52.16 O
ATOM 11 C2' A B 79 47.467 68.395 119.212 1.00 52.48 C
ATOM 12 O2' A B 79 48.870 68.399 119.365 1.00 51.21 O
ATOM 13 C1' A B 79 46.910 67.080 119.763 1.00 53.85 C
ATOM 14 N9 A B 79 45.764 66.606 118.990 1.00 54.59 N
ATOM 15 C8 A B 79 44.438 66.575 119.346 1.00 55.00 C
ATOM 16 N7 A B 79 43.651 66.107 118.409 1.00 55.72 N
ATOM 17 C5 A B 79 44.518 65.805 117.367 1.00 55.80 C
ATOM 18 C6 A B 79 44.306 65.271 116.083 1.00 55.76 C
ATOM 19 N6 A B 79 43.105 64.925 115.615 1.00 54.97 N
ATOM 20 N1 A B 79 45.386 65.099 115.287 1.00 55.66 N
ATOM 21 C2 A B 79 46.591 65.439 115.762 1.00 55.69 C
ATOM 22 N3 A B 79 46.917 65.943 116.950 1.00 55.08 N
ATOM 23 C4 A B 79 45.822 66.104 117.713 1.00 54.85 C
ATOM 24 P C B 80 46.853 71.928 119.401 1.00 49.67 P
ATOM 25 OP1 C B 80 47.875 72.998 119.535 1.00 51.23 O
ATOM 26 OP2 C B 80 45.471 72.166 119.903 1.00 48.54 O
ATOM 27 O5' C B 80 46.783 71.483 117.873 1.00 48.97 O
TER

Atoms:
OP1: (37.284,59.923,110.025)
OP2: (35.791,60.937,111.862)
C3': (40.563,61.331,113.300)
C1': (40.537,63.630,113.760)
C5': (39.460,61.611,111.019)
O6: (36.371,65.157,117.793)
O4': (40.178,63.445,112.399)
C8: (38.023,63.635,114.143)
C2: (39.917,65.308,117.707)
C6: (37.513,65.010,117.347)
C5: (37.909,64.479,116.094)
C4: (39.253,64.429,115.789)
P: (36.886,61.085,110.870)
C4': (40.502,62.090,111.989)
C2': (41.234,62.349,114.209)
O2': (42.618,62.479,113.953)
N1: (38.610,65.403,118.105)
N2: (40.832,65.747,118.576)
N3: (40.300,64.821,116.541)
N7: (37.147,63.973,115.050)
N9: (39.320,63.887,114.528)
O5': (38.174,61.593,111.653)
O3': (41.287,60.114,113.183)
OP1: (43.765,71.102,123.650)
OP2: (42.065,69.983,122.082)
C3': (46.763,69.409,120.103)
C1': (46.910,67.080,119.763)
C5': (45.821,69.198,122.505)
O4': (46.494,67.323,121.099)
C8: (44.438,66.575,119.346)
O2': (48.870,68.399,119.365)
C6: (44.306,65.271,116.083)
C5: (44.518,65.805,117.367)
C4: (45.822,66.104,117.713)
P: (43.309,69.904,122.890)
C4': (46.777,68.702,121.444)
C2': (47.467,68.395,119.212)
C2: (46.591,65.439,115.762)
N1: (45.386,65.099,115.287)
N3: (46.917,65.943,116.950)
N6: (43.105,64.925,115.615)
N7: (43.651,66.107,118.409)
N9: (45.764,66.606,118.990)
O5': (44.501,69.389,121.961)
O3': (47.462,70.643,120.147)
Image (generated by PyMOL):
PyMOL image
show in jmol