ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1K8A:A13:A508

Extra

PDB:
ATOM 1 O3' U A 12 34.594 148.368 74.154 1.00 40.84 O
ATOM 2 P G A 13 35.125 147.987 72.684 1.00 40.71 P
ATOM 3 OP1 G A 13 36.493 148.515 72.529 1.00 43.16 O
ATOM 4 OP2 G A 13 34.070 148.397 71.735 1.00 42.12 O
ATOM 5 O5' G A 13 35.181 146.394 72.634 1.00 42.27 O
ATOM 6 C5' G A 13 36.087 145.617 73.452 1.00 40.82 C
ATOM 7 C4' G A 13 35.682 144.164 73.399 1.00 40.52 C
ATOM 8 O4' G A 13 34.359 144.016 73.978 1.00 41.68 O
ATOM 9 C3' G A 13 35.510 143.659 71.982 1.00 39.16 C
ATOM 10 O3' G A 13 36.731 143.230 71.459 1.00 36.01 O
ATOM 11 C2' G A 13 34.489 142.536 72.104 1.00 40.61 C
ATOM 12 O2' G A 13 35.005 141.279 72.441 1.00 40.47 O
ATOM 13 C1' G A 13 33.612 143.053 73.237 1.00 41.50 C
ATOM 14 N9 G A 13 32.411 143.700 72.735 1.00 41.86 N
ATOM 15 C8 G A 13 32.300 144.974 72.244 1.00 41.59 C
ATOM 16 N7 G A 13 31.075 145.302 71.961 1.00 42.45 N
ATOM 17 C5 G A 13 30.340 144.165 72.264 1.00 42.58 C
ATOM 18 C6 G A 13 28.956 143.933 72.194 1.00 42.48 C
ATOM 19 O6 G A 13 28.063 144.713 71.852 1.00 43.62 O
ATOM 20 N1 G A 13 28.635 142.642 72.590 1.00 42.40 N
ATOM 21 C2 G A 13 29.533 141.697 73.006 1.00 41.91 C
ATOM 22 N2 G A 13 29.021 140.505 73.344 1.00 41.50 N
ATOM 23 N3 G A 13 30.829 141.906 73.085 1.00 42.53 N
ATOM 24 C4 G A 13 31.158 143.159 72.708 1.00 42.44 C
ATOM 25 P G A 14 37.033 143.447 69.911 1.00 36.26 P
ATOM 26 OP1 G A 14 38.492 143.301 69.716 1.00 35.60 O
ATOM 27 OP2 G A 14 36.357 144.706 69.515 1.00 36.38 O
ATOM 28 O5' G A 14 36.318 142.216 69.210 1.00 31.52 O
TER

ATOM 1 O3' A B 507 25.038 136.423 74.696 1.00 39.38 O
ATOM 2 P A B 508 25.293 137.140 76.106 1.00 40.68 P
ATOM 3 OP1 A B 508 24.123 136.773 76.948 1.00 41.36 O
ATOM 4 OP2 A B 508 25.638 138.572 75.904 1.00 39.01 O
ATOM 5 O5' A B 508 26.585 136.411 76.679 1.00 40.31 O
ATOM 6 C5' A B 508 26.590 135.002 76.944 1.00 39.33 C
ATOM 7 C4' A B 508 27.996 134.540 77.196 1.00 37.26 C
ATOM 8 O4' A B 508 28.779 134.731 75.997 1.00 35.73 O
ATOM 9 C3' A B 508 28.721 135.345 78.253 1.00 34.90 C
ATOM 10 O3' A B 508 28.425 134.783 79.514 1.00 34.41 O
ATOM 11 C2' A B 508 30.165 135.093 77.887 1.00 36.82 C
ATOM 12 O2' A B 508 30.562 133.822 78.349 1.00 39.80 O
ATOM 13 C1' A B 508 30.094 135.080 76.358 1.00 37.05 C
ATOM 14 N9 A B 508 30.421 136.377 75.774 1.00 39.00 N
ATOM 15 C8 A B 508 29.602 137.435 75.447 1.00 39.32 C
ATOM 16 N7 A B 508 30.248 138.469 74.962 1.00 39.59 N
ATOM 17 C5 A B 508 31.576 138.063 74.962 1.00 39.36 C
ATOM 18 C6 A B 508 32.762 138.699 74.569 1.00 38.76 C
ATOM 19 N6 A B 508 32.818 139.934 74.063 1.00 36.75 N
ATOM 20 N1 A B 508 33.912 138.012 74.715 1.00 39.37 N
ATOM 21 C2 A B 508 33.864 136.767 75.208 1.00 38.76 C
ATOM 22 N3 A B 508 32.820 136.061 75.599 1.00 37.46 N
ATOM 23 C4 A B 508 31.693 136.775 75.455 1.00 39.50 C
ATOM 24 P A B 509 28.491 135.685 80.831 1.00 35.87 P
ATOM 25 OP1 A B 509 28.059 134.856 81.971 1.00 35.85 O
ATOM 26 OP2 A B 509 27.790 136.955 80.537 1.00 35.50 O
ATOM 27 O5' A B 509 30.037 135.960 81.021 1.00 36.93 O
TER

Atoms:
OP1: (36.493,148.515,72.529)
OP2: (34.070,148.397,71.735)
C3': (35.510,143.659,71.982)
C1': (33.612,143.053,73.237)
C5': (36.087,145.617,73.452)
O6: (28.063,144.713,71.852)
O4': (34.359,144.016,73.978)
C8: (32.300,144.974,72.244)
C2: (29.533,141.697,73.006)
C6: (28.956,143.933,72.194)
C5: (30.340,144.165,72.264)
C4: (31.158,143.159,72.708)
P: (35.125,147.987,72.684)
C4': (35.682,144.164,73.399)
C2': (34.489,142.536,72.104)
O2': (35.005,141.279,72.441)
N1: (28.635,142.642,72.590)
N2: (29.021,140.505,73.344)
N3: (30.829,141.906,73.085)
N7: (31.075,145.302,71.961)
N9: (32.411,143.700,72.735)
O5': (35.181,146.394,72.634)
O3': (36.731,143.230,71.459)
OP1: (24.123,136.773,76.948)
OP2: (25.638,138.572,75.904)
C3': (28.721,135.345,78.253)
C1': (30.094,135.080,76.358)
C5': (26.590,135.002,76.944)
O4': (28.779,134.731,75.997)
C8: (29.602,137.435,75.447)
O2': (30.562,133.822,78.349)
C6: (32.762,138.699,74.569)
C5: (31.576,138.063,74.962)
C4: (31.693,136.775,75.455)
P: (25.293,137.140,76.106)
C4': (27.996,134.540,77.196)
C2': (30.165,135.093,77.887)
C2: (33.864,136.767,75.208)
N1: (33.912,138.012,74.715)
N3: (32.820,136.061,75.599)
N6: (32.818,139.934,74.063)
N7: (30.248,138.469,74.962)
N9: (30.421,136.377,75.774)
O5': (26.585,136.411,76.679)
O3': (28.425,134.783,79.514)
Image (generated by PyMOL):
PyMOL image
show in jmol