Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5H:712:79
Extra
PDB:
ATOM 1 O3' U A 11 139.946 -56.876 296.242 1.00 59.22 O
ATOM 2 P A A 12 141.534 -56.981 296.287 1.00 52.03 P
ATOM 3 OP1 A A 12 141.901 -57.359 297.669 1.00 52.82 O
ATOM 4 OP2 A A 12 142.080 -55.758 295.711 1.00 51.59 O
ATOM 5 O5' A A 12 141.821 -58.186 295.343 1.00 51.55 O
ATOM 6 C5' A A 12 141.720 -59.500 295.833 1.00 51.93 C
ATOM 7 C4' A A 12 142.159 -60.478 294.804 1.00 51.38 C
ATOM 8 O4' A A 12 141.070 -60.702 293.857 1.00 50.95 O
ATOM 9 C3' A A 12 143.353 -60.039 293.979 1.00 50.81 C
ATOM 10 O3' A A 12 144.151 -61.180 293.712 1.00 50.68 O
ATOM 11 C2' A A 12 142.696 -59.554 292.678 1.00 50.09 C
ATOM 12 O2' A A 12 143.539 -59.580 291.559 1.00 49.41 O
ATOM 13 C1' A A 12 141.555 -60.546 292.549 1.00 50.17 C
ATOM 14 N9 A A 12 140.450 -60.129 291.686 1.00 49.73 N
ATOM 15 C8 A A 12 139.369 -59.329 291.955 1.00 49.90 C
ATOM 16 N7 A A 12 138.506 -59.162 290.951 1.00 49.39 N
ATOM 17 C5 A A 12 139.074 -59.931 289.965 1.00 48.86 C
ATOM 18 C6 A A 12 138.691 -60.191 288.656 1.00 48.18 C
ATOM 19 N6 A A 12 137.597 -59.697 288.126 1.00 47.92 N
ATOM 20 N1 A A 12 139.462 -60.988 287.893 1.00 47.76 N
ATOM 21 C2 A A 12 140.553 -61.521 288.427 1.00 48.03 C
ATOM 22 N3 A A 12 141.020 -61.345 289.655 1.00 48.66 N
ATOM 23 C4 A A 12 140.236 -60.543 290.396 1.00 49.06 C
ATOM 24 P U A 13 145.669 -61.213 294.188 1.00 52.99 P
ATOM 25 OP1 U A 13 146.272 -62.486 293.672 1.00 52.76 O
ATOM 26 OP2 U A 13 145.670 -60.970 295.659 1.00 53.79 O
ATOM 27 O5' U A 13 146.283 -59.943 293.398 1.00 52.41 O
TER
ATOM 1 O3' C B 8 134.901 -58.879 282.567 1.00 48.07 O
ATOM 2 P C B 9 136.145 -58.174 281.870 1.00 47.19 P
ATOM 3 OP1 C B 9 135.720 -56.789 281.587 1.00 46.96 O
ATOM 4 OP2 C B 9 136.576 -59.025 280.750 1.00 46.62 O
ATOM 5 O5' C B 9 137.279 -58.184 282.987 1.00 47.72 O
ATOM 6 C5' C B 9 137.089 -57.637 284.276 1.00 48.40 C
ATOM 7 C4' C B 9 138.225 -58.033 285.192 1.00 48.85 C
ATOM 8 O4' C B 9 138.377 -59.476 285.171 1.00 48.94 O
ATOM 9 C3' C B 9 139.592 -57.489 284.814 1.00 48.52 C
ATOM 10 O3' C B 9 140.386 -57.339 285.989 1.00 49.10 O
ATOM 11 C2' C B 9 140.171 -58.605 283.993 1.00 48.12 C
ATOM 12 O2' C B 9 141.562 -58.587 283.938 1.00 48.00 O
ATOM 13 C1' C B 9 139.679 -59.807 284.757 1.00 48.66 C
ATOM 14 N1 C B 9 139.602 -61.017 283.949 1.00 48.32 N
ATOM 15 C2 C B 9 140.307 -62.172 284.326 1.00 48.57 C
ATOM 16 O2 C B 9 141.001 -62.141 285.338 1.00 49.08 O
ATOM 17 N3 C B 9 140.212 -63.288 283.554 1.00 48.26 N
ATOM 18 C4 C B 9 139.472 -63.246 282.424 1.00 47.69 C
ATOM 19 N4 C B 9 139.384 -64.343 281.661 1.00 47.39 N
ATOM 20 C5 C B 9 138.748 -62.076 282.034 1.00 47.43 C
ATOM 21 C6 C B 9 138.835 -60.992 282.815 1.00 47.75 C
ATOM 22 P A B 10 140.746 -55.874 286.542 1.00 43.46 P
ATOM 23 OP1 A B 10 139.467 -55.160 286.786 1.00 43.63 O
ATOM 24 OP2 A B 10 141.734 -55.279 285.601 1.00 42.84 O
ATOM 25 O5' A B 10 141.436 -56.211 287.936 1.00 44.21 O
TER
ATOM 2 P A A 12 141.534 -56.981 296.287 1.00 52.03 P
ATOM 3 OP1 A A 12 141.901 -57.359 297.669 1.00 52.82 O
ATOM 4 OP2 A A 12 142.080 -55.758 295.711 1.00 51.59 O
ATOM 5 O5' A A 12 141.821 -58.186 295.343 1.00 51.55 O
ATOM 6 C5' A A 12 141.720 -59.500 295.833 1.00 51.93 C
ATOM 7 C4' A A 12 142.159 -60.478 294.804 1.00 51.38 C
ATOM 8 O4' A A 12 141.070 -60.702 293.857 1.00 50.95 O
ATOM 9 C3' A A 12 143.353 -60.039 293.979 1.00 50.81 C
ATOM 10 O3' A A 12 144.151 -61.180 293.712 1.00 50.68 O
ATOM 11 C2' A A 12 142.696 -59.554 292.678 1.00 50.09 C
ATOM 12 O2' A A 12 143.539 -59.580 291.559 1.00 49.41 O
ATOM 13 C1' A A 12 141.555 -60.546 292.549 1.00 50.17 C
ATOM 14 N9 A A 12 140.450 -60.129 291.686 1.00 49.73 N
ATOM 15 C8 A A 12 139.369 -59.329 291.955 1.00 49.90 C
ATOM 16 N7 A A 12 138.506 -59.162 290.951 1.00 49.39 N
ATOM 17 C5 A A 12 139.074 -59.931 289.965 1.00 48.86 C
ATOM 18 C6 A A 12 138.691 -60.191 288.656 1.00 48.18 C
ATOM 19 N6 A A 12 137.597 -59.697 288.126 1.00 47.92 N
ATOM 20 N1 A A 12 139.462 -60.988 287.893 1.00 47.76 N
ATOM 21 C2 A A 12 140.553 -61.521 288.427 1.00 48.03 C
ATOM 22 N3 A A 12 141.020 -61.345 289.655 1.00 48.66 N
ATOM 23 C4 A A 12 140.236 -60.543 290.396 1.00 49.06 C
ATOM 24 P U A 13 145.669 -61.213 294.188 1.00 52.99 P
ATOM 25 OP1 U A 13 146.272 -62.486 293.672 1.00 52.76 O
ATOM 26 OP2 U A 13 145.670 -60.970 295.659 1.00 53.79 O
ATOM 27 O5' U A 13 146.283 -59.943 293.398 1.00 52.41 O
TER
ATOM 1 O3' C B 8 134.901 -58.879 282.567 1.00 48.07 O
ATOM 2 P C B 9 136.145 -58.174 281.870 1.00 47.19 P
ATOM 3 OP1 C B 9 135.720 -56.789 281.587 1.00 46.96 O
ATOM 4 OP2 C B 9 136.576 -59.025 280.750 1.00 46.62 O
ATOM 5 O5' C B 9 137.279 -58.184 282.987 1.00 47.72 O
ATOM 6 C5' C B 9 137.089 -57.637 284.276 1.00 48.40 C
ATOM 7 C4' C B 9 138.225 -58.033 285.192 1.00 48.85 C
ATOM 8 O4' C B 9 138.377 -59.476 285.171 1.00 48.94 O
ATOM 9 C3' C B 9 139.592 -57.489 284.814 1.00 48.52 C
ATOM 10 O3' C B 9 140.386 -57.339 285.989 1.00 49.10 O
ATOM 11 C2' C B 9 140.171 -58.605 283.993 1.00 48.12 C
ATOM 12 O2' C B 9 141.562 -58.587 283.938 1.00 48.00 O
ATOM 13 C1' C B 9 139.679 -59.807 284.757 1.00 48.66 C
ATOM 14 N1 C B 9 139.602 -61.017 283.949 1.00 48.32 N
ATOM 15 C2 C B 9 140.307 -62.172 284.326 1.00 48.57 C
ATOM 16 O2 C B 9 141.001 -62.141 285.338 1.00 49.08 O
ATOM 17 N3 C B 9 140.212 -63.288 283.554 1.00 48.26 N
ATOM 18 C4 C B 9 139.472 -63.246 282.424 1.00 47.69 C
ATOM 19 N4 C B 9 139.384 -64.343 281.661 1.00 47.39 N
ATOM 20 C5 C B 9 138.748 -62.076 282.034 1.00 47.43 C
ATOM 21 C6 C B 9 138.835 -60.992 282.815 1.00 47.75 C
ATOM 22 P A B 10 140.746 -55.874 286.542 1.00 43.46 P
ATOM 23 OP1 A B 10 139.467 -55.160 286.786 1.00 43.63 O
ATOM 24 OP2 A B 10 141.734 -55.279 285.601 1.00 42.84 O
ATOM 25 O5' A B 10 141.436 -56.211 287.936 1.00 44.21 O
TER
Atoms:
OP1: (141.901,-57.359,297.669)
OP2: (142.080,-55.758,295.711)
C3': (143.353,-60.039,293.979)
C1': (141.555,-60.546,292.549)
C5': (141.720,-59.500,295.833)
O4': (141.070,-60.702,293.857)
C8: (139.369,-59.329,291.955)
O2': (143.539,-59.580,291.559)
C6: (138.691,-60.191,288.656)
C5: (139.074,-59.931,289.965)
C4: (140.236,-60.543,290.396)
P: (141.534,-56.981,296.287)
C4': (142.159,-60.478,294.804)
C2': (142.696,-59.554,292.678)
C2: (140.553,-61.521,288.427)
N1: (139.462,-60.988,287.893)
N3: (141.020,-61.345,289.655)
N6: (137.597,-59.697,288.126)
N7: (138.506,-59.162,290.951)
N9: (140.450,-60.129,291.686)
O5': (141.821,-58.186,295.343)
O3': (144.151,-61.180,293.712)
OP2: (142.080,-55.758,295.711)
C3': (143.353,-60.039,293.979)
C1': (141.555,-60.546,292.549)
C5': (141.720,-59.500,295.833)
O4': (141.070,-60.702,293.857)
C8: (139.369,-59.329,291.955)
O2': (143.539,-59.580,291.559)
C6: (138.691,-60.191,288.656)
C5: (139.074,-59.931,289.965)
C4: (140.236,-60.543,290.396)
P: (141.534,-56.981,296.287)
C4': (142.159,-60.478,294.804)
C2': (142.696,-59.554,292.678)
C2: (140.553,-61.521,288.427)
N1: (139.462,-60.988,287.893)
N3: (141.020,-61.345,289.655)
N6: (137.597,-59.697,288.126)
N7: (138.506,-59.162,290.951)
N9: (140.450,-60.129,291.686)
O5': (141.821,-58.186,295.343)
O3': (144.151,-61.180,293.712)
C2: (140.307,-62.172,284.326)
OP1: (135.720,-56.789,281.587)
OP2: (136.576,-59.025,280.750)
C4: (139.472,-63.246,282.424)
O5': (137.279,-58.184,282.987)
C3': (139.592,-57.489,284.814)
C1': (139.679,-59.807,284.757)
O4': (138.377,-59.476,285.171)
C5': (137.089,-57.637,284.276)
P: (136.145,-58.174,281.870)
O2: (141.001,-62.141,285.338)
C4': (138.225,-58.033,285.192)
C2': (140.171,-58.605,283.993)
O2': (141.562,-58.587,283.938)
N1: (139.602,-61.017,283.949)
N3: (140.212,-63.288,283.554)
N4: (139.384,-64.343,281.661)
C6: (138.835,-60.992,282.815)
C5: (138.748,-62.076,282.034)
O3': (140.386,-57.339,285.989)
OP1: (135.720,-56.789,281.587)
OP2: (136.576,-59.025,280.750)
C4: (139.472,-63.246,282.424)
O5': (137.279,-58.184,282.987)
C3': (139.592,-57.489,284.814)
C1': (139.679,-59.807,284.757)
O4': (138.377,-59.476,285.171)
C5': (137.089,-57.637,284.276)
P: (136.145,-58.174,281.870)
O2: (141.001,-62.141,285.338)
C4': (138.225,-58.033,285.192)
C2': (140.171,-58.605,283.993)
O2': (141.562,-58.587,283.938)
N1: (139.602,-61.017,283.949)
N3: (140.212,-63.288,283.554)
N4: (139.384,-64.343,281.661)
C6: (138.835,-60.992,282.815)
C5: (138.748,-62.076,282.034)
O3': (140.386,-57.339,285.989)
Image (generated by PyMOL):