Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J03:A1928:A1217
Extra
PDB:
ATOM 1 O3' U A1927 -45.754 -82.895 7.681 1.00 15.69 O
ATOM 2 P G A1928 -47.170 -83.551 8.024 1.00 28.14 P
ATOM 3 OP1 G A1928 -47.294 -83.852 9.474 1.00 36.93 O
ATOM 4 OP2 G A1928 -47.342 -84.635 7.027 1.00 36.93 O
ATOM 5 O5' G A1928 -48.190 -82.379 7.699 1.00 0.79 O
ATOM 6 C5' G A1928 -48.099 -81.120 8.395 1.00 0.79 C
ATOM 7 C4' G A1928 -49.177 -80.184 7.920 1.00 0.79 C
ATOM 8 O4' G A1928 -48.929 -79.819 6.543 1.00 0.79 O
ATOM 9 C3' G A1928 -50.574 -80.765 7.941 1.00 0.79 C
ATOM 10 O3' G A1928 -51.142 -80.589 9.234 1.00 0.79 O
ATOM 11 C2' G A1928 -51.281 -79.967 6.857 1.00 0.79 C
ATOM 12 O2' G A1928 -51.731 -78.720 7.339 1.00 0.79 O
ATOM 13 C1' G A1928 -50.156 -79.733 5.847 1.00 0.79 C
ATOM 14 N9 G A1928 -50.134 -80.739 4.797 1.00 5.65 N
ATOM 15 C8 G A1928 -49.317 -81.831 4.750 1.00 5.79 C
ATOM 16 N7 G A1928 -49.540 -82.588 3.718 1.00 5.86 N
ATOM 17 C5 G A1928 -50.569 -81.958 3.046 1.00 6.01 C
ATOM 18 C6 G A1928 -51.237 -82.333 1.885 1.00 6.06 C
ATOM 19 O6 G A1928 -51.072 -83.336 1.204 1.00 5.98 O
ATOM 20 N1 G A1928 -52.201 -81.411 1.529 1.00 6.00 N
ATOM 21 C2 G A1928 -52.485 -80.276 2.214 1.00 5.98 C
ATOM 22 N2 G A1928 -53.459 -79.520 1.696 1.00 5.88 N
ATOM 23 N3 G A1928 -51.868 -79.914 3.321 1.00 6.07 N
ATOM 24 C4 G A1928 -50.929 -80.802 3.680 1.00 5.93 C
ATOM 25 P A A1929 -52.684 -80.962 9.487 1.00 16.98 P
ATOM 26 OP1 A A1929 -52.948 -80.928 10.948 1.00 45.62 O
ATOM 27 OP2 A A1929 -53.015 -82.192 8.714 1.00 45.62 O
ATOM 28 O5' A A1929 -53.452 -79.748 8.809 1.00 0.79 O
TER
ATOM 1 O3' U B1216 -56.736 -77.987 -3.104 1.00 22.64 O
ATOM 2 P A B1217 -55.533 -76.974 -3.440 1.00 21.48 P
ATOM 3 OP1 A B1217 -55.897 -76.375 -4.755 1.00 43.70 O
ATOM 4 OP2 A B1217 -54.218 -77.636 -3.286 1.00 43.70 O
ATOM 5 O5' A B1217 -55.626 -75.868 -2.289 1.00 22.47 O
ATOM 6 C5' A B1217 -56.781 -74.990 -2.183 1.00 22.47 C
ATOM 7 C4' A B1217 -56.548 -73.899 -1.149 1.00 22.47 C
ATOM 8 O4' A B1217 -56.841 -74.370 0.187 1.00 22.47 O
ATOM 9 C3' A B1217 -55.149 -73.306 -1.075 1.00 22.47 C
ATOM 10 O3' A B1217 -54.994 -72.275 -2.052 1.00 22.47 O
ATOM 11 C2' A B1217 -55.093 -72.758 0.347 1.00 22.47 C
ATOM 12 O2' A B1217 -55.652 -71.473 0.455 1.00 22.47 O
ATOM 13 C1' A B1217 -55.974 -73.746 1.113 1.00 22.47 C
ATOM 14 N9 A B1217 -55.159 -74.776 1.750 1.00 21.58 N
ATOM 15 C8 A B1217 -54.859 -76.018 1.267 1.00 21.58 C
ATOM 16 N7 A B1217 -54.031 -76.694 2.024 1.00 21.58 N
ATOM 17 C5 A B1217 -53.782 -75.847 3.084 1.00 21.58 C
ATOM 18 C6 A B1217 -52.960 -75.970 4.203 1.00 21.58 C
ATOM 19 N6 A B1217 -52.170 -77.015 4.432 1.00 21.58 N
ATOM 20 N1 A B1217 -52.955 -74.958 5.087 1.00 21.58 N
ATOM 21 C2 A B1217 -53.709 -73.880 4.828 1.00 21.58 C
ATOM 22 N3 A B1217 -54.501 -73.634 3.790 1.00 21.58 N
ATOM 23 C4 A B1217 -54.493 -74.672 2.945 1.00 21.58 C
ATOM 24 P A B1218 -53.566 -71.574 -2.258 1.00 26.67 P
ATOM 25 OP1 A B1218 -53.738 -70.469 -3.235 1.00 18.67 O
ATOM 26 OP2 A B1218 -52.546 -72.630 -2.525 1.00 18.67 O
ATOM 27 O5' A B1218 -53.265 -70.914 -0.843 1.00 0.79 O
TER
ATOM 2 P G A1928 -47.170 -83.551 8.024 1.00 28.14 P
ATOM 3 OP1 G A1928 -47.294 -83.852 9.474 1.00 36.93 O
ATOM 4 OP2 G A1928 -47.342 -84.635 7.027 1.00 36.93 O
ATOM 5 O5' G A1928 -48.190 -82.379 7.699 1.00 0.79 O
ATOM 6 C5' G A1928 -48.099 -81.120 8.395 1.00 0.79 C
ATOM 7 C4' G A1928 -49.177 -80.184 7.920 1.00 0.79 C
ATOM 8 O4' G A1928 -48.929 -79.819 6.543 1.00 0.79 O
ATOM 9 C3' G A1928 -50.574 -80.765 7.941 1.00 0.79 C
ATOM 10 O3' G A1928 -51.142 -80.589 9.234 1.00 0.79 O
ATOM 11 C2' G A1928 -51.281 -79.967 6.857 1.00 0.79 C
ATOM 12 O2' G A1928 -51.731 -78.720 7.339 1.00 0.79 O
ATOM 13 C1' G A1928 -50.156 -79.733 5.847 1.00 0.79 C
ATOM 14 N9 G A1928 -50.134 -80.739 4.797 1.00 5.65 N
ATOM 15 C8 G A1928 -49.317 -81.831 4.750 1.00 5.79 C
ATOM 16 N7 G A1928 -49.540 -82.588 3.718 1.00 5.86 N
ATOM 17 C5 G A1928 -50.569 -81.958 3.046 1.00 6.01 C
ATOM 18 C6 G A1928 -51.237 -82.333 1.885 1.00 6.06 C
ATOM 19 O6 G A1928 -51.072 -83.336 1.204 1.00 5.98 O
ATOM 20 N1 G A1928 -52.201 -81.411 1.529 1.00 6.00 N
ATOM 21 C2 G A1928 -52.485 -80.276 2.214 1.00 5.98 C
ATOM 22 N2 G A1928 -53.459 -79.520 1.696 1.00 5.88 N
ATOM 23 N3 G A1928 -51.868 -79.914 3.321 1.00 6.07 N
ATOM 24 C4 G A1928 -50.929 -80.802 3.680 1.00 5.93 C
ATOM 25 P A A1929 -52.684 -80.962 9.487 1.00 16.98 P
ATOM 26 OP1 A A1929 -52.948 -80.928 10.948 1.00 45.62 O
ATOM 27 OP2 A A1929 -53.015 -82.192 8.714 1.00 45.62 O
ATOM 28 O5' A A1929 -53.452 -79.748 8.809 1.00 0.79 O
TER
ATOM 1 O3' U B1216 -56.736 -77.987 -3.104 1.00 22.64 O
ATOM 2 P A B1217 -55.533 -76.974 -3.440 1.00 21.48 P
ATOM 3 OP1 A B1217 -55.897 -76.375 -4.755 1.00 43.70 O
ATOM 4 OP2 A B1217 -54.218 -77.636 -3.286 1.00 43.70 O
ATOM 5 O5' A B1217 -55.626 -75.868 -2.289 1.00 22.47 O
ATOM 6 C5' A B1217 -56.781 -74.990 -2.183 1.00 22.47 C
ATOM 7 C4' A B1217 -56.548 -73.899 -1.149 1.00 22.47 C
ATOM 8 O4' A B1217 -56.841 -74.370 0.187 1.00 22.47 O
ATOM 9 C3' A B1217 -55.149 -73.306 -1.075 1.00 22.47 C
ATOM 10 O3' A B1217 -54.994 -72.275 -2.052 1.00 22.47 O
ATOM 11 C2' A B1217 -55.093 -72.758 0.347 1.00 22.47 C
ATOM 12 O2' A B1217 -55.652 -71.473 0.455 1.00 22.47 O
ATOM 13 C1' A B1217 -55.974 -73.746 1.113 1.00 22.47 C
ATOM 14 N9 A B1217 -55.159 -74.776 1.750 1.00 21.58 N
ATOM 15 C8 A B1217 -54.859 -76.018 1.267 1.00 21.58 C
ATOM 16 N7 A B1217 -54.031 -76.694 2.024 1.00 21.58 N
ATOM 17 C5 A B1217 -53.782 -75.847 3.084 1.00 21.58 C
ATOM 18 C6 A B1217 -52.960 -75.970 4.203 1.00 21.58 C
ATOM 19 N6 A B1217 -52.170 -77.015 4.432 1.00 21.58 N
ATOM 20 N1 A B1217 -52.955 -74.958 5.087 1.00 21.58 N
ATOM 21 C2 A B1217 -53.709 -73.880 4.828 1.00 21.58 C
ATOM 22 N3 A B1217 -54.501 -73.634 3.790 1.00 21.58 N
ATOM 23 C4 A B1217 -54.493 -74.672 2.945 1.00 21.58 C
ATOM 24 P A B1218 -53.566 -71.574 -2.258 1.00 26.67 P
ATOM 25 OP1 A B1218 -53.738 -70.469 -3.235 1.00 18.67 O
ATOM 26 OP2 A B1218 -52.546 -72.630 -2.525 1.00 18.67 O
ATOM 27 O5' A B1218 -53.265 -70.914 -0.843 1.00 0.79 O
TER
Atoms:
OP1: (-47.294,-83.852,9.474)
OP2: (-47.342,-84.635,7.027)
C3': (-50.574,-80.765,7.941)
C1': (-50.156,-79.733,5.847)
C5': (-48.099,-81.120,8.395)
O6: (-51.072,-83.336,1.204)
O4': (-48.929,-79.819,6.543)
C8: (-49.317,-81.831,4.750)
C2: (-52.485,-80.276,2.214)
C6: (-51.237,-82.333,1.885)
C5: (-50.569,-81.958,3.046)
C4: (-50.929,-80.802,3.680)
P: (-47.170,-83.551,8.024)
C4': (-49.177,-80.184,7.920)
C2': (-51.281,-79.967,6.857)
O2': (-51.731,-78.720,7.339)
N1: (-52.201,-81.411,1.529)
N2: (-53.459,-79.520,1.696)
N3: (-51.868,-79.914,3.321)
N7: (-49.540,-82.588,3.718)
N9: (-50.134,-80.739,4.797)
O5': (-48.190,-82.379,7.699)
O3': (-51.142,-80.589,9.234)
OP2: (-47.342,-84.635,7.027)
C3': (-50.574,-80.765,7.941)
C1': (-50.156,-79.733,5.847)
C5': (-48.099,-81.120,8.395)
O6: (-51.072,-83.336,1.204)
O4': (-48.929,-79.819,6.543)
C8: (-49.317,-81.831,4.750)
C2: (-52.485,-80.276,2.214)
C6: (-51.237,-82.333,1.885)
C5: (-50.569,-81.958,3.046)
C4: (-50.929,-80.802,3.680)
P: (-47.170,-83.551,8.024)
C4': (-49.177,-80.184,7.920)
C2': (-51.281,-79.967,6.857)
O2': (-51.731,-78.720,7.339)
N1: (-52.201,-81.411,1.529)
N2: (-53.459,-79.520,1.696)
N3: (-51.868,-79.914,3.321)
N7: (-49.540,-82.588,3.718)
N9: (-50.134,-80.739,4.797)
O5': (-48.190,-82.379,7.699)
O3': (-51.142,-80.589,9.234)
OP1: (-55.897,-76.375,-4.755)
OP2: (-54.218,-77.636,-3.286)
C3': (-55.149,-73.306,-1.075)
C1': (-55.974,-73.746,1.113)
C5': (-56.781,-74.990,-2.183)
O4': (-56.841,-74.370,0.187)
C8: (-54.859,-76.018,1.267)
O2': (-55.652,-71.473,0.455)
C6: (-52.960,-75.970,4.203)
C5: (-53.782,-75.847,3.084)
C4: (-54.493,-74.672,2.945)
P: (-55.533,-76.974,-3.440)
C4': (-56.548,-73.899,-1.149)
C2': (-55.093,-72.758,0.347)
C2: (-53.709,-73.880,4.828)
N1: (-52.955,-74.958,5.087)
N3: (-54.501,-73.634,3.790)
N6: (-52.170,-77.015,4.432)
N7: (-54.031,-76.694,2.024)
N9: (-55.159,-74.776,1.750)
O5': (-55.626,-75.868,-2.289)
O3': (-54.994,-72.275,-2.052)
OP2: (-54.218,-77.636,-3.286)
C3': (-55.149,-73.306,-1.075)
C1': (-55.974,-73.746,1.113)
C5': (-56.781,-74.990,-2.183)
O4': (-56.841,-74.370,0.187)
C8: (-54.859,-76.018,1.267)
O2': (-55.652,-71.473,0.455)
C6: (-52.960,-75.970,4.203)
C5: (-53.782,-75.847,3.084)
C4: (-54.493,-74.672,2.945)
P: (-55.533,-76.974,-3.440)
C4': (-56.548,-73.899,-1.149)
C2': (-55.093,-72.758,0.347)
C2: (-53.709,-73.880,4.828)
N1: (-52.955,-74.958,5.087)
N3: (-54.501,-73.634,3.790)
N6: (-52.170,-77.015,4.432)
N7: (-54.031,-76.694,2.024)
N9: (-55.159,-74.776,1.750)
O5': (-55.626,-75.868,-2.289)
O3': (-54.994,-72.275,-2.052)
Image (generated by PyMOL):